RNA–Protein interactions for RNA: ENST00000556375.5

SLIRP-206, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-206ENST00000556375 C1RLQ9NZP8 487 aa9.37□□□□□ -0.91
SLIRP-206ENST00000556375 ST3GAL6Q9Y274 331 aa9.37□□□□□ -0.91
SLIRP-206ENST00000556375 MRPS28Q9Y2Q9 187 aaKnown RBP9.37□□□□□ -0.91
SLIRP-206ENST00000556375 TBL2Q9Y4P3 447 aaKnown RBP9.37□□□□□ -0.91
SLIRP-206ENST00000556375 IGHV2-26A0A0B4J1V2 119 aa9.36□□□□□ -0.91
SLIRP-206ENST00000556375 A0A1B0GUS0 222 aa9.36□□□□□ -0.91
SLIRP-206ENST00000556375 FAM90A8PA6NJQ4 464 aa9.36□□□□□ -0.91
SLIRP-206ENST00000556375 HSPB6O14558 160 aa9.36□□□□□ -0.91
SLIRP-206ENST00000556375 SC5DO75845 299 aa9.36□□□□□ -0.91
SLIRP-206ENST00000556375 OR7C1O76099 320 aaPredicted RBP9.36□□□□□ -0.91
SLIRP-206ENST00000556375 MAS1P04201 325 aa9.36□□□□□ -0.91
SLIRP-206ENST00000556375 ARG1P05089 322 aa9.36□□□□□ -0.91
SLIRP-206ENST00000556375 GTF2F2P13984 249 aa9.36□□□□□ -0.91
SLIRP-206ENST00000556375 TPBGQ13641 420 aa9.36□□□□□ -0.91
SLIRP-206ENST00000556375 INSL4Q14641 139 aa9.36□□□□□ -0.91
SLIRP-206ENST00000556375 TBCEQ15813 527 aaPredicted RBP9.36□□□□□ -0.91
SLIRP-206ENST00000556375 MPV17LQ2QL34 196 aa9.36□□□□□ -0.91
SLIRP-206ENST00000556375 LRRC75BQ2VPJ9 315 aa9.36□□□□□ -0.91
SLIRP-206ENST00000556375 SLC22A6Q4U2R8 563 aa9.36□□□□□ -0.91
SLIRP-206ENST00000556375 ACSM3Q53FZ2 586 aa9.36□□□□□ -0.91
SLIRP-206ENST00000556375 LIPKQ5VXJ0 399 aa9.36□□□□□ -0.91
SLIRP-206ENST00000556375 AWAT2Q6E213 333 aa9.36□□□□□ -0.91
SLIRP-206ENST00000556375 UNQ9370/PRO34162Q6UXP9 181 aa9.36□□□□□ -0.91
SLIRP-206ENST00000556375 HEPN1Q6WQI6 88 aa9.36□□□□□ -0.91
SLIRP-206ENST00000556375 LYPD6Q86Y78 171 aa9.36□□□□□ -0.91
SLIRP-206ENST00000556375 OR4F5Q8NH21 305 aa9.36□□□□□ -0.91
SLIRP-206ENST00000556375 PHYHIPQ92561 330 aa9.36□□□□□ -0.91
SLIRP-206ENST00000556375 UQCC2Q9BRT2 126 aa9.36□□□□□ -0.91
SLIRP-206ENST00000556375 CLEC7AQ9BXN2 247 aa9.36□□□□□ -0.91
SLIRP-206ENST00000556375 CCDC90BQ9GZT6 254 aa9.36□□□□□ -0.91
SLIRP-206ENST00000556375 PPIL3Q9H2H8 161 aaKnown RBP9.36□□□□□ -0.91
SLIRP-206ENST00000556375 TMEM133Q9H2Q1 129 aa9.36□□□□□ -0.91
SLIRP-206ENST00000556375 NCOR1P1Q9H4R4 102 aa9.36□□□□□ -0.91
SLIRP-206ENST00000556375 OR6C3Q9NZP0 311 aa9.36□□□□□ -0.91
SLIRP-206ENST00000556375 MMP24Q9Y5R2 645 aa9.36□□□□□ -0.91
SLIRP-206ENST00000556375 A0A1W2PP11 408 aa9.35□□□□□ -0.91
SLIRP-206ENST00000556375 MEGF11A6BM72 1044 aa9.35□□□□□ -0.91
SLIRP-206ENST00000556375 ZNF729A6NN14 1252 aaPredicted RBP9.35□□□□□ -0.91
SLIRP-206ENST00000556375 H3BUX3 64 aa9.35□□□□□ -0.91
SLIRP-206ENST00000556375 GEMIN2O14893 280 aaKnown RBP9.35□□□□□ -0.91
SLIRP-206ENST00000556375 HSMCR30P0CW71 290 aa9.35□□□□□ -0.91
SLIRP-206ENST00000556375 MDKP21741 143 aaPredicted RBP9.35□□□□□ -0.91
SLIRP-206ENST00000556375 OMGP23515 440 aa9.35□□□□□ -0.91
SLIRP-206ENST00000556375 CDK2P24941 298 aa9.35□□□□□ -0.91
SLIRP-206ENST00000556375 GLP1RP43220 463 aa9.35□□□□□ -0.91
SLIRP-206ENST00000556375 RELBQ01201 579 aa9.35□□□□□ -0.91
SLIRP-206ENST00000556375 MLLT11Q13015 90 aaPredicted RBP9.35□□□□□ -0.91
SLIRP-206ENST00000556375 TRAM1Q15629 374 aa9.35□□□□□ -0.91
SLIRP-206ENST00000556375 FAM27D1Q5T7N8 215 aa9.35□□□□□ -0.91
SLIRP-206ENST00000556375 PRAMEF5Q5TYX0 476 aa9.35□□□□□ -0.91
SLIRP-206ENST00000556375 RSBN1Q5VWQ0 802 aaPredicted RBP9.35□□□□□ -0.91
SLIRP-206ENST00000556375 DHRS7BQ6IAN0 325 aaPredicted RBP9.35□□□□□ -0.91
SLIRP-206ENST00000556375 OR52W1Q6IF63 320 aa9.35□□□□□ -0.91
SLIRP-206ENST00000556375 GLIPR1L1Q6UWM5 242 aa9.35□□□□□ -0.91
SLIRP-206ENST00000556375 LHFPL4Q7Z7J7 247 aa9.35□□□□□ -0.91
SLIRP-206ENST00000556375 OR4D6Q8NGJ1 314 aa9.35□□□□□ -0.91
SLIRP-206ENST00000556375 TAF15Q92804 592 aaKnown RBP eCLIP9.35□□□□□ -0.91
SLIRP-206ENST00000556375 MRPS24Q96EL2 167 aaKnown RBP9.35□□□□□ -0.91
SLIRP-206ENST00000556375 SSX3Q99909 188 aa9.35□□□□□ -0.91
SLIRP-206ENST00000556375 ZNF747Q9BV97 191 aa9.35□□□□□ -0.91
SLIRP-206ENST00000556375 DPCDQ9BVM2 203 aaPredicted RBP9.35□□□□□ -0.91
SLIRP-206ENST00000556375 BARHL1Q9BZE3 327 aa9.35□□□□□ -0.91
SLIRP-206ENST00000556375 Q9H521 79 aa9.35□□□□□ -0.91
SLIRP-206ENST00000556375 TCF7L1Q9HCS4 588 aa9.35□□□□□ -0.91
SLIRP-206ENST00000556375 ING3Q9NXR8 418 aa9.35□□□□□ -0.91
SLIRP-206ENST00000556375 ZNF581Q9P0T4 197 aa9.35□□□□□ -0.91
SLIRP-206ENST00000556375 KIF25Q9UIL4 384 aa9.35□□□□□ -0.91
SLIRP-206ENST00000556375 NBEAL1Q6ZS30 2694 aa9.34□□□□□ -0.91
SLIRP-206ENST00000556375 MEIKINA0A087WXM9 373 aa9.34□□□□□ -0.91
SLIRP-206ENST00000556375 POM121CA8CG34 1229 aa9.34□□□□□ -0.91
SLIRP-206ENST00000556375 VGLL3A8MV65 326 aa9.34□□□□□ -0.91
SLIRP-206ENST00000556375 MMP23AO75900 390 aa9.34□□□□□ -0.91
SLIRP-206ENST00000556375 UCHL1P09936 223 aa9.34□□□□□ -0.91
SLIRP-206ENST00000556375 PSMA1P25786 263 aaKnown RBP9.34□□□□□ -0.91
SLIRP-206ENST00000556375 CD34P28906 385 aa9.34□□□□□ -0.91
SLIRP-206ENST00000556375 GP2P55259 537 aaKnown RBP9.34□□□□□ -0.91
SLIRP-206ENST00000556375 GABARAPL2P60520 117 aa9.34□□□□□ -0.91
SLIRP-206ENST00000556375 DYNC1I2Q13409 638 aaKnown RBP9.34□□□□□ -0.91
SLIRP-206ENST00000556375 HSD17B12Q53GQ0 312 aa9.34□□□□□ -0.91
SLIRP-206ENST00000556375 LDLRAD2Q5SZI1 272 aa9.34□□□□□ -0.91
SLIRP-206ENST00000556375 MINOS1Q5TGZ0 78 aa9.34□□□□□ -0.91
SLIRP-206ENST00000556375 ZNF367Q7RTV3 350 aa9.34□□□□□ -0.91
SLIRP-206ENST00000556375 CEACAM19Q7Z692 300 aa9.34□□□□□ -0.91
SLIRP-206ENST00000556375 LRRTM1Q86UE6 522 aa9.34□□□□□ -0.91
SLIRP-206ENST00000556375 RTN4RL2Q86UN3 420 aa9.34□□□□□ -0.91
SLIRP-206ENST00000556375 SUMF2Q8NBJ7 301 aa9.34□□□□□ -0.91
SLIRP-206ENST00000556375 PLPPR1Q8TBJ4 325 aa9.34□□□□□ -0.91
SLIRP-206ENST00000556375 MALSU1Q96EH3 234 aa9.34□□□□□ -0.91
SLIRP-206ENST00000556375 BEX1Q9HBH7 125 aa9.34□□□□□ -0.91
SLIRP-206ENST00000556375 SPACA1Q9HBV2 294 aa9.34□□□□□ -0.91
SLIRP-206ENST00000556375 GHRLQ9UBU3 117 aa9.34□□□□□ -0.91
SLIRP-206ENST00000556375 MINOS1-NBL1R4GNA1 71 aa9.34□□□□□ -0.91
SLIRP-206ENST00000556375 A0A087X0M5 115 aa9.33□□□□□ -0.92
SLIRP-206ENST00000556375 KBTBD11-OT1A0A1B0GTJ5 212 aa9.33□□□□□ -0.92
SLIRP-206ENST00000556375 A0A1B0GX30 115 aa9.33□□□□□ -0.92
SLIRP-206ENST00000556375 FAM90A10PA6NDY2 464 aa9.33□□□□□ -0.92
SLIRP-206ENST00000556375 FAM90A18PA6NE21 464 aa9.33□□□□□ -0.92
SLIRP-206ENST00000556375 FAM90A16PA6NEW6 464 aa9.33□□□□□ -0.92
SLIRP-206ENST00000556375 FAM90A20PA6NIJ5 464 aa9.33□□□□□ -0.92
SLIRP-206ENST00000556375 FAM90A7PA6NKC0 464 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms