RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 ZNF728P0DKX0 622 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 TMEM225BP0DP42 221 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 MYF5P13349 255 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 PRF1P14222 555 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 ABOP16442 354 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 ZNF14P17017 642 aaPredicted RBP3.8□□□□□ -1.8
ATXN3-241ENST00000556374 ZNF17P17021 662 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 DTYMKP23919 212 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 GABRR1P24046 479 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 CHATP28329 748 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 FCGR2CP31995 323 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 RFC3P40938 356 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 PTGFRP43088 359 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 SULT1A2P50226 295 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 PPT1P50897 306 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 RAB5CP51148 216 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 CAV2P51636 162 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 AKR1C2P52895 323 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 UCNP55089 124 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 FOXG1P55316 489 aaPredicted RBP3.8□□□□□ -1.8
ATXN3-241ENST00000556374 KRTAP10-7P60409 375 aaPredicted RBP3.8□□□□□ -1.8
ATXN3-241ENST00000556374 VAMP2P63027 116 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 AKR1C1Q04828 323 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 CHAF1BQ13112 559 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 RAB32Q13637 225 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 ZNF266Q14584 549 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 GNMTQ14749 295 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 RAB35Q15286 201 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 KISS1Q15726 138 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 STK11Q15831 433 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 EXT1Q16394 746 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 HFEQ30201 348 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 AKIRIN2Q53H80 203 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 DHRS7BQ6IAN0 325 aaPredicted RBP3.8□□□□□ -1.8
ATXN3-241ENST00000556374 TMEM71Q6P5X7 295 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 TMEM88Q6PEY1 159 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 ATRAIDQ6UW56 229 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 Q6ZRG5 221 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 HIST2H3AQ71DI3 136 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 LHFPL1Q86WI0 220 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 PPP1R3BQ86XI6 285 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 LYPD6Q86Y78 171 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 CBLN2Q8IUK8 224 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 LINC00518Q8N0U6 118 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 LGI3Q8N145 548 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 PAQR4Q8N4S7 273 aaPredicted RBP3.8□□□□□ -1.8
ATXN3-241ENST00000556374 C15orf54Q8N8G6 183 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 ZSCAN4Q8NAM6 433 aaPredicted RBP3.8□□□□□ -1.8
ATXN3-241ENST00000556374 CLEC18CQ8NCF0 446 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 TMEM104Q8NE00 496 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 OR2M3Q8NG83 312 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 OR10G3Q8NGC4 313 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 OR5D18Q8NGL1 313 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 OR13G1Q8NGZ3 307 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 NPRL2Q8WTW4 380 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 TOMM40LQ969M1 308 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 PIGTQ969N2 578 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 RAB24Q969Q5 203 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 SPACA9Q96E40 222 aaPredicted RBP3.8□□□□□ -1.8
ATXN3-241ENST00000556374 BORCS8Q96FH0 119 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 ZNF799Q96GE5 643 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 ZNF48Q96MX3 618 aaPredicted RBP3.8□□□□□ -1.8
ATXN3-241ENST00000556374 TECTBQ96PL2 329 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 CMSS1Q9BQ75 279 aaKnown RBP3.8□□□□□ -1.8
ATXN3-241ENST00000556374 WDR77Q9BQA1 342 aaPredicted RBP3.8□□□□□ -1.8
ATXN3-241ENST00000556374 ZNF2Q9BSG1 426 aaPredicted RBP3.8□□□□□ -1.8
ATXN3-241ENST00000556374 TM2D1Q9BX74 207 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 SUCNR1Q9BXA5 334 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 MRPL13Q9BYD1 178 aaKnown RBP3.8□□□□□ -1.8
ATXN3-241ENST00000556374 CHST5Q9GZS9 411 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 SLC5A7Q9GZV3 580 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 C5orf66Q9H5L9 145 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 TMEM231Q9H6L2 316 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 RHOFQ9HBH0 211 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 TMEM100Q9NV29 134 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 PLEKHJ1Q9NW61 149 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 PLEK2Q9NYT0 353 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 OR5AC2Q9NZP5 309 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 FBXL17Q9UF56 701 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 ZNF391Q9UJN7 358 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 PADI1Q9ULC6 663 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 SLC7A11Q9UPY5 501 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 OSGIN2Q9Y236 505 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 PIGLQ9Y2B2 252 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 NSG2Q9Y328 171 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 RHBDD3Q9Y3P4 386 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 EXPH5Q8NEV8 1989 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 SETD2Q9BYW2 2564 aaPredicted RBP3.79□□□□□ -1.8
ATXN3-241ENST00000556374 UTP20O75691 2785 aaKnown RBP3.79□□□□□ -1.8
ATXN3-241ENST00000556374 IGLV3-12A0A075B6K2 115 aa3.79□□□□□ -1.8
ATXN3-241ENST00000556374 A0A0A6YYD4 124 aa3.79□□□□□ -1.8
ATXN3-241ENST00000556374 FAM230AA0A1W2PPH8 454 aa3.79□□□□□ -1.8
ATXN3-241ENST00000556374 PQLC2LA1A4F0 135 aa3.79□□□□□ -1.8
ATXN3-241ENST00000556374 CRYM-AS1A6NIL9 109 aa3.79□□□□□ -1.8
ATXN3-241ENST00000556374 DHRS7CA6NNS2 312 aa3.79□□□□□ -1.8
ATXN3-241ENST00000556374 CEACAM18A8MTB9 384 aa3.79□□□□□ -1.8
ATXN3-241ENST00000556374 RNASEK-C17orf49H0YIS7 233 aa3.79□□□□□ -1.8
ATXN3-241ENST00000556374 H3BMH7 237 aa3.79□□□□□ -1.8
ATXN3-241ENST00000556374 M0R036 132 aa3.79□□□□□ -1.8
ATXN3-241ENST00000556374 WRBO00258 174 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms