RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 MED22Q15528 200 aa9.38□□□□□ -0.91
SLIRP-205ENST00000556310 TAF9Q16594 264 aa9.38□□□□□ -0.91
SLIRP-205ENST00000556310 PIGYQ3MUY2 71 aa9.38□□□□□ -0.91
SLIRP-205ENST00000556310 PAN3Q58A45 887 aaKnown RBP9.38□□□□□ -0.91
SLIRP-205ENST00000556310 ZNF626Q68DY1 528 aa9.38□□□□□ -0.91
SLIRP-205ENST00000556310 PRSS48Q7RTY5 328 aa9.38□□□□□ -0.91
SLIRP-205ENST00000556310 LINC00596Q86U02 117 aa9.38□□□□□ -0.91
SLIRP-205ENST00000556310 CDH26Q8IXH8 852 aa9.38□□□□□ -0.91
SLIRP-205ENST00000556310 OSR2Q8N2R0 312 aa9.38□□□□□ -0.91
SLIRP-205ENST00000556310 MS4A15Q8N5U1 240 aa9.38□□□□□ -0.91
SLIRP-205ENST00000556310 C3orf56Q8N813 242 aa9.38□□□□□ -0.91
SLIRP-205ENST00000556310 NKAIN3Q8N8D7 197 aa9.38□□□□□ -0.91
SLIRP-205ENST00000556310 OR11H6Q8NGC7 330 aa9.38□□□□□ -0.91
SLIRP-205ENST00000556310 OR5R1Q8NH85 324 aa9.38□□□□□ -0.91
SLIRP-205ENST00000556310 COQ2Q96H96 371 aa9.38□□□□□ -0.91
SLIRP-205ENST00000556310 AJUBAQ96IF1 538 aa9.38□□□□□ -0.91
SLIRP-205ENST00000556310 CNBD2Q96M20 576 aa9.38□□□□□ -0.91
SLIRP-205ENST00000556310 NR1H4Q96RI1 486 aaPredicted RBP9.38□□□□□ -0.91
SLIRP-205ENST00000556310 S100A13Q99584 98 aa9.38□□□□□ -0.91
SLIRP-205ENST00000556310 GAL3ST2Q9H3Q3 398 aa9.38□□□□□ -0.91
SLIRP-205ENST00000556310 IFT22Q9H7X7 185 aa9.38□□□□□ -0.91
SLIRP-205ENST00000556310 VPREB3Q9UKI3 123 aa9.38□□□□□ -0.91
SLIRP-205ENST00000556310 BLOC1S6Q9UL45 172 aa9.38□□□□□ -0.91
SLIRP-205ENST00000556310 ING4Q9UNL4 249 aa9.38□□□□□ -0.91
SLIRP-205ENST00000556310 SESN1Q9Y6P5 492 aa9.38□□□□□ -0.91
SLIRP-205ENST00000556310 TRAV24A0A0B4J272 114 aa9.37□□□□□ -0.91
SLIRP-205ENST00000556310 NDUFA7O95182 113 aa9.37□□□□□ -0.91
SLIRP-205ENST00000556310 CRYBA1P05813 215 aa9.37□□□□□ -0.91
SLIRP-205ENST00000556310 SERPINA2P20848 420 aa9.37□□□□□ -0.91
SLIRP-205ENST00000556310 GLIPR1P48060 266 aa9.37□□□□□ -0.91
SLIRP-205ENST00000556310 KCNJ3P48549 501 aa9.37□□□□□ -0.91
SLIRP-205ENST00000556310 RAG2P55895 527 aa9.37□□□□□ -0.91
SLIRP-205ENST00000556310 LGALS4P56470 323 aa9.37□□□□□ -0.91
SLIRP-205ENST00000556310 PAX5Q02548 391 aa9.37□□□□□ -0.91
SLIRP-205ENST00000556310 GPR50Q13585 617 aa9.37□□□□□ -0.91
SLIRP-205ENST00000556310 GPR176Q14439 515 aa9.37□□□□□ -0.91
SLIRP-205ENST00000556310 AANATQ16613 207 aa9.37□□□□□ -0.91
SLIRP-205ENST00000556310 KRBOX4Q5JUW0 171 aa9.37□□□□□ -0.91
SLIRP-205ENST00000556310 RBM48Q5RL73 367 aaKnown RBP9.37□□□□□ -0.91
SLIRP-205ENST00000556310 GDPGP1Q6ZNW5 385 aa9.37□□□□□ -0.91
SLIRP-205ENST00000556310 JAGN1Q8N5M9 183 aa9.37□□□□□ -0.91
SLIRP-205ENST00000556310 C17orf50Q8WW18 174 aa9.37□□□□□ -0.91
SLIRP-205ENST00000556310 CORO2AQ92828 525 aa9.37□□□□□ -0.91
SLIRP-205ENST00000556310 UFD1Q92890 307 aa9.37□□□□□ -0.91
SLIRP-205ENST00000556310 MUL1Q969V5 352 aa9.37□□□□□ -0.91
SLIRP-205ENST00000556310 FOXRED1Q96CU9 486 aaPredicted RBP9.37□□□□□ -0.91
SLIRP-205ENST00000556310 TMED9Q9BVK6 235 aa9.37□□□□□ -0.91
SLIRP-205ENST00000556310 MEGF9Q9H1U4 602 aa9.37□□□□□ -0.91
SLIRP-205ENST00000556310 ISYNA1Q9NPH2 558 aa9.37□□□□□ -0.91
SLIRP-205ENST00000556310 PCDHB16Q9NRJ7 776 aa9.37□□□□□ -0.91
SLIRP-205ENST00000556310 TAS2R3Q9NYW6 316 aa9.37□□□□□ -0.91
SLIRP-205ENST00000556310 C1RLQ9NZP8 487 aa9.37□□□□□ -0.91
SLIRP-205ENST00000556310 ST3GAL6Q9Y274 331 aa9.37□□□□□ -0.91
SLIRP-205ENST00000556310 MRPS28Q9Y2Q9 187 aaKnown RBP9.37□□□□□ -0.91
SLIRP-205ENST00000556310 TBL2Q9Y4P3 447 aaKnown RBP9.37□□□□□ -0.91
SLIRP-205ENST00000556310 IGHV2-26A0A0B4J1V2 119 aa9.36□□□□□ -0.91
SLIRP-205ENST00000556310 A0A1B0GUS0 222 aa9.36□□□□□ -0.91
SLIRP-205ENST00000556310 TMEM238LA0A1B0GVL6 79 aa9.36□□□□□ -0.91
SLIRP-205ENST00000556310 FAM90A8PA6NJQ4 464 aa9.36□□□□□ -0.91
SLIRP-205ENST00000556310 HSPB6O14558 160 aa9.36□□□□□ -0.91
SLIRP-205ENST00000556310 SC5DO75845 299 aa9.36□□□□□ -0.91
SLIRP-205ENST00000556310 OR7C1O76099 320 aaPredicted RBP9.36□□□□□ -0.91
SLIRP-205ENST00000556310 MAS1P04201 325 aa9.36□□□□□ -0.91
SLIRP-205ENST00000556310 ARG1P05089 322 aa9.36□□□□□ -0.91
SLIRP-205ENST00000556310 GTF2F2P13984 249 aa9.36□□□□□ -0.91
SLIRP-205ENST00000556310 TPBGQ13641 420 aa9.36□□□□□ -0.91
SLIRP-205ENST00000556310 INSL4Q14641 139 aa9.36□□□□□ -0.91
SLIRP-205ENST00000556310 TBCEQ15813 527 aaPredicted RBP9.36□□□□□ -0.91
SLIRP-205ENST00000556310 MPV17LQ2QL34 196 aa9.36□□□□□ -0.91
SLIRP-205ENST00000556310 LRRC75BQ2VPJ9 315 aa9.36□□□□□ -0.91
SLIRP-205ENST00000556310 SLC22A6Q4U2R8 563 aa9.36□□□□□ -0.91
SLIRP-205ENST00000556310 ACSM3Q53FZ2 586 aa9.36□□□□□ -0.91
SLIRP-205ENST00000556310 LIPKQ5VXJ0 399 aa9.36□□□□□ -0.91
SLIRP-205ENST00000556310 AWAT2Q6E213 333 aa9.36□□□□□ -0.91
SLIRP-205ENST00000556310 UNQ9370/PRO34162Q6UXP9 181 aa9.36□□□□□ -0.91
SLIRP-205ENST00000556310 HEPN1Q6WQI6 88 aa9.36□□□□□ -0.91
SLIRP-205ENST00000556310 LYPD6Q86Y78 171 aa9.36□□□□□ -0.91
SLIRP-205ENST00000556310 OR4F5Q8NH21 305 aa9.36□□□□□ -0.91
SLIRP-205ENST00000556310 PHYHIPQ92561 330 aa9.36□□□□□ -0.91
SLIRP-205ENST00000556310 UQCC2Q9BRT2 126 aa9.36□□□□□ -0.91
SLIRP-205ENST00000556310 CLEC7AQ9BXN2 247 aa9.36□□□□□ -0.91
SLIRP-205ENST00000556310 CCDC90BQ9GZT6 254 aa9.36□□□□□ -0.91
SLIRP-205ENST00000556310 PPIL3Q9H2H8 161 aaKnown RBP9.36□□□□□ -0.91
SLIRP-205ENST00000556310 TMEM133Q9H2Q1 129 aa9.36□□□□□ -0.91
SLIRP-205ENST00000556310 NCOR1P1Q9H4R4 102 aa9.36□□□□□ -0.91
SLIRP-205ENST00000556310 OR6C3Q9NZP0 311 aa9.36□□□□□ -0.91
SLIRP-205ENST00000556310 MMP24Q9Y5R2 645 aa9.36□□□□□ -0.91
SLIRP-205ENST00000556310 A0A1W2PP11 408 aa9.35□□□□□ -0.91
SLIRP-205ENST00000556310 MEGF11A6BM72 1044 aa9.35□□□□□ -0.91
SLIRP-205ENST00000556310 ZNF729A6NN14 1252 aaPredicted RBP9.35□□□□□ -0.91
SLIRP-205ENST00000556310 H3BUX3 64 aa9.35□□□□□ -0.91
SLIRP-205ENST00000556310 GEMIN2O14893 280 aaKnown RBP9.35□□□□□ -0.91
SLIRP-205ENST00000556310 HSMCR30P0CW71 290 aa9.35□□□□□ -0.91
SLIRP-205ENST00000556310 MDKP21741 143 aaPredicted RBP9.35□□□□□ -0.91
SLIRP-205ENST00000556310 OMGP23515 440 aa9.35□□□□□ -0.91
SLIRP-205ENST00000556310 CDK2P24941 298 aa9.35□□□□□ -0.91
SLIRP-205ENST00000556310 GLP1RP43220 463 aa9.35□□□□□ -0.91
SLIRP-205ENST00000556310 MLLT11Q13015 90 aaPredicted RBP9.35□□□□□ -0.91
SLIRP-205ENST00000556310 TRAM1Q15629 374 aa9.35□□□□□ -0.91
SLIRP-205ENST00000556310 FAM27D1Q5T7N8 215 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms