RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 FAM90A9PA6NNJ1 464 aa7.06□□□□□ -1.28
GTF2A1-204ENST00000556268 FAM90A12PA8MX19 464 aa7.06□□□□□ -1.28
GTF2A1-204ENST00000556268 FAM90A5PA8MXJ8 464 aa7.06□□□□□ -1.28
GTF2A1-204ENST00000556268 E9PQ18 207 aa7.06□□□□□ -1.28
GTF2A1-204ENST00000556268 MAGEB4O15481 346 aaPredicted RBP7.06□□□□□ -1.28
GTF2A1-204ENST00000556268 FAM90A15PP0C7V4 464 aa7.06□□□□□ -1.28
GTF2A1-204ENST00000556268 FAM90A13PP0C7W8 464 aa7.06□□□□□ -1.28
GTF2A1-204ENST00000556268 FAM90A14PP0C7W9 464 aa7.06□□□□□ -1.28
GTF2A1-204ENST00000556268 FAM90A24PP0C7X0 464 aa7.06□□□□□ -1.28
GTF2A1-204ENST00000556268 PEX2P28328 305 aa7.06□□□□□ -1.28
GTF2A1-204ENST00000556268 CD34P28906 385 aa7.06□□□□□ -1.28
GTF2A1-204ENST00000556268 HOXD3P31249 432 aaPredicted RBP7.06□□□□□ -1.28
GTF2A1-204ENST00000556268 THBS3P49746 956 aa7.06□□□□□ -1.28
GTF2A1-204ENST00000556268 MNAT1P51948 309 aa7.06□□□□□ -1.28
GTF2A1-204ENST00000556268 FUT6P51993 359 aa7.06□□□□□ -1.28
GTF2A1-204ENST00000556268 EDDM3BP56851 147 aa7.06□□□□□ -1.28
GTF2A1-204ENST00000556268 SSBP2P81877 361 aaPredicted RBP7.06□□□□□ -1.28
GTF2A1-204ENST00000556268 IL18R1Q13478 541 aa7.06□□□□□ -1.28
GTF2A1-204ENST00000556268 ZNF146Q15072 292 aa7.06□□□□□ -1.28
GTF2A1-204ENST00000556268 SNAPC1Q16533 368 aa7.06□□□□□ -1.28
GTF2A1-204ENST00000556268 ABCA11PQ4W5N1 156 aa7.06□□□□□ -1.28
GTF2A1-204ENST00000556268 TMEM236Q5W0B7 351 aa7.06□□□□□ -1.28
GTF2A1-204ENST00000556268 ZNF322Q6U7Q0 402 aaPredicted RBP7.06□□□□□ -1.28
GTF2A1-204ENST00000556268 HEPN1Q6WQI6 88 aa7.06□□□□□ -1.28
GTF2A1-204ENST00000556268 COMMD2Q86X83 199 aa7.06□□□□□ -1.28
GTF2A1-204ENST00000556268 EGFL6Q8IUX8 553 aa7.06□□□□□ -1.28
GTF2A1-204ENST00000556268 BATF2Q8N1L9 274 aa7.06□□□□□ -1.28
GTF2A1-204ENST00000556268 ABHD12Q8N2K0 398 aa7.06□□□□□ -1.28
GTF2A1-204ENST00000556268 OSR2Q8N2R0 312 aa7.06□□□□□ -1.28
GTF2A1-204ENST00000556268 ZNF676Q8N7Q3 588 aa7.06□□□□□ -1.28
GTF2A1-204ENST00000556268 ASCC1Q8N9N2 400 aaKnown RBP7.06□□□□□ -1.28
GTF2A1-204ENST00000556268 OR4X2Q8NGF9 303 aa7.06□□□□□ -1.28
GTF2A1-204ENST00000556268 NDNFQ8TB73 568 aa7.06□□□□□ -1.28
GTF2A1-204ENST00000556268 STMN2Q93045 179 aa7.06□□□□□ -1.28
GTF2A1-204ENST00000556268 CEP19Q96LK0 163 aa7.06□□□□□ -1.28
GTF2A1-204ENST00000556268 P2RX4Q99571 388 aa7.06□□□□□ -1.28
GTF2A1-204ENST00000556268 APOL4Q9BPW4 351 aa7.06□□□□□ -1.28
GTF2A1-204ENST00000556268 QTRT1Q9BXR0 403 aaKnown RBP7.06□□□□□ -1.28
GTF2A1-204ENST00000556268 MED4Q9NPJ6 270 aa7.06□□□□□ -1.28
GTF2A1-204ENST00000556268 UBE2J1Q9Y385 318 aaPredicted RBP7.06□□□□□ -1.28
GTF2A1-204ENST00000556268 SACSQ9NZJ4 4579 aa7.05□□□□□ -1.28
GTF2A1-204ENST00000556268 A0A087X0M5 115 aa7.05□□□□□ -1.28
GTF2A1-204ENST00000556268 A0A1B0GX30 115 aa7.05□□□□□ -1.28
GTF2A1-204ENST00000556268 LEUTXA8MZ59 168 aa7.05□□□□□ -1.28
GTF2A1-204ENST00000556268 LOC110117498-PIK3R3F6TDL0 507 aa7.05□□□□□ -1.28
GTF2A1-204ENST00000556268 RRP9O43818 475 aaKnown RBP7.05□□□□□ -1.28
GTF2A1-204ENST00000556268 CLIC3O95833 236 aa7.05□□□□□ -1.28
GTF2A1-204ENST00000556268 CST1P01037 141 aa7.05□□□□□ -1.28
GTF2A1-204ENST00000556268 CGB3P0DN86 165 aa7.05□□□□□ -1.28
GTF2A1-204ENST00000556268 CGB7P0DN87 165 aa7.05□□□□□ -1.28
GTF2A1-204ENST00000556268 ANXA8P13928 327 aa7.05□□□□□ -1.28
GTF2A1-204ENST00000556268 PRKACGP22612 351 aa7.05□□□□□ -1.28
GTF2A1-204ENST00000556268 SLC6A1P30531 599 aa7.05□□□□□ -1.28
GTF2A1-204ENST00000556268 ACTR3P61158 418 aa7.05□□□□□ -1.28
GTF2A1-204ENST00000556268 DCTN2Q13561 401 aaKnown RBP7.05□□□□□ -1.28
GTF2A1-204ENST00000556268 AADACL4Q5VUY2 407 aa7.05□□□□□ -1.28
GTF2A1-204ENST00000556268 OR52W1Q6IF63 320 aa7.05□□□□□ -1.28
GTF2A1-204ENST00000556268 BAIAP2L2Q6UXY1 529 aa7.05□□□□□ -1.28
GTF2A1-204ENST00000556268 MEPCEQ7L2J0 689 aaKnown RBP7.05□□□□□ -1.28
GTF2A1-204ENST00000556268 ENTHD1Q8IYW4 607 aa7.05□□□□□ -1.28
GTF2A1-204ENST00000556268 TPRX1Q8N7U7 411 aa7.05□□□□□ -1.28
GTF2A1-204ENST00000556268 ZNF596Q8TC21 504 aa7.05□□□□□ -1.28
GTF2A1-204ENST00000556268 SLC25A33Q9BSK2 321 aa7.05□□□□□ -1.28
GTF2A1-204ENST00000556268 MCRIP2Q9BUT9 160 aaKnown RBP7.05□□□□□ -1.28
GTF2A1-204ENST00000556268 CADM1Q9BY67 442 aaKnown RBP7.05□□□□□ -1.28
GTF2A1-204ENST00000556268 MOB1AQ9H8S9 216 aa7.05□□□□□ -1.28
GTF2A1-204ENST00000556268 ZFP57Q9NU63 452 aa7.05□□□□□ -1.28
GTF2A1-204ENST00000556268 TAS2R3Q9NYW6 316 aa7.05□□□□□ -1.28
GTF2A1-204ENST00000556268 TVP23BQ9NYZ1 205 aa7.05□□□□□ -1.28
GTF2A1-204ENST00000556268 MRM2Q9UI43 246 aaKnown RBP7.05□□□□□ -1.28
GTF2A1-204ENST00000556268 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.05□□□□□ -1.28
GTF2A1-204ENST00000556268 SLC7A11Q9UPY5 501 aa7.05□□□□□ -1.28
GTF2A1-204ENST00000556268 LSM4Q9Y4Z0 139 aaKnown RBP7.05□□□□□ -1.28
GTF2A1-204ENST00000556268 KIAA2026Q5HYC2 2103 aa7.04□□□□□ -1.28
GTF2A1-204ENST00000556268 FAM230AA0A1W2PPH8 454 aa7.04□□□□□ -1.28
GTF2A1-204ENST00000556268 OOSP1A8MZH6 123 aa7.04□□□□□ -1.28
GTF2A1-204ENST00000556268 BUB1B-PAK6H3BSN5 160 aa7.04□□□□□ -1.28
GTF2A1-204ENST00000556268 M0QZK8 103 aa7.04□□□□□ -1.28
GTF2A1-204ENST00000556268 RGS10O43665 173 aa7.04□□□□□ -1.28
GTF2A1-204ENST00000556268 HAND1O96004 215 aa7.04□□□□□ -1.28
GTF2A1-204ENST00000556268 MRPL3P09001 348 aaKnown RBP7.04□□□□□ -1.28
GTF2A1-204ENST00000556268 HOXB6P17509 224 aaKnown RBP7.04□□□□□ -1.28
GTF2A1-204ENST00000556268 MYCNOSP40205 109 aa7.04□□□□□ -1.28
GTF2A1-204ENST00000556268 NPBWR2P48146 333 aa7.04□□□□□ -1.28
GTF2A1-204ENST00000556268 CRISP1P54107 249 aa7.04□□□□□ -1.28
GTF2A1-204ENST00000556268 P2RX3P56373 397 aa7.04□□□□□ -1.28
GTF2A1-204ENST00000556268 CDC42P60953 191 aa7.04□□□□□ -1.28
GTF2A1-204ENST00000556268 CXCR4P61073 352 aa7.04□□□□□ -1.28
GTF2A1-204ENST00000556268 ESRRGP62508 458 aa7.04□□□□□ -1.28
GTF2A1-204ENST00000556268 ZNF91Q05481 1191 aa7.04□□□□□ -1.28
GTF2A1-204ENST00000556268 GRK1Q15835 563 aa7.04□□□□□ -1.28
GTF2A1-204ENST00000556268 HSP90B2PQ58FF3 399 aa7.04□□□□□ -1.28
GTF2A1-204ENST00000556268 BCL2L15Q5TBC7 163 aa7.04□□□□□ -1.28
GTF2A1-204ENST00000556268 SLX4IPQ5VYV7 408 aa7.04□□□□□ -1.28
GTF2A1-204ENST00000556268 SLC25A26Q70HW3 274 aa7.04□□□□□ -1.28
GTF2A1-204ENST00000556268 RNF144BQ7Z419 303 aa7.04□□□□□ -1.28
GTF2A1-204ENST00000556268 CATSPERDQ86XM0 798 aa7.04□□□□□ -1.28
GTF2A1-204ENST00000556268 Q8IYB0 196 aa7.04□□□□□ -1.28
GTF2A1-204ENST00000556268 HS3ST5Q8IZT8 346 aa7.04□□□□□ -1.28
GTF2A1-204ENST00000556268 CCDC54Q8NEL0 328 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms