RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 PTAFRP25105 342 aa12.45□□□□□ -0.42
VPS33B-205ENST00000556096 CA7P43166 264 aa12.45□□□□□ -0.42
VPS33B-205ENST00000556096 GLP1RP43220 463 aa12.45□□□□□ -0.42
VPS33B-205ENST00000556096 KIR2DS4P43632 304 aa12.45□□□□□ -0.42
VPS33B-205ENST00000556096 UCP3P55916 312 aa12.45□□□□□ -0.42
VPS33B-205ENST00000556096 KLF3P57682 345 aaPredicted RBP12.45□□□□□ -0.42
VPS33B-205ENST00000556096 BAMBIQ13145 260 aa12.45□□□□□ -0.42
VPS33B-205ENST00000556096 KIR2DS1Q14954 304 aa12.45□□□□□ -0.42
VPS33B-205ENST00000556096 DCAF12L2Q5VW00 463 aa12.45□□□□□ -0.42
VPS33B-205ENST00000556096 LIN54Q6MZP7 749 aa12.45□□□□□ -0.42
VPS33B-205ENST00000556096 ZNF880Q6PDB4 577 aa12.45□□□□□ -0.42
VPS33B-205ENST00000556096 TMEM108Q6UXF1 575 aa12.45□□□□□ -0.42
VPS33B-205ENST00000556096 LRP11Q86VZ4 500 aa12.45□□□□□ -0.42
VPS33B-205ENST00000556096 RDH5Q92781 318 aa12.45□□□□□ -0.42
VPS33B-205ENST00000556096 CLEC4MQ9H2X3 399 aaPredicted RBP12.45□□□□□ -0.42
VPS33B-205ENST00000556096 LIME1Q9H400 295 aa12.45□□□□□ -0.42
VPS33B-205ENST00000556096 DUSP13Q9UII6 198 aa12.45□□□□□ -0.42
VPS33B-205ENST00000556096 HSPB11Q9Y547 144 aa12.45□□□□□ -0.42
VPS33B-205ENST00000556096 ATP23Q9Y6H3 246 aa12.45□□□□□ -0.42
VPS33B-205ENST00000556096 DBX1A6NMT0 343 aa12.44□□□□□ -0.42
VPS33B-205ENST00000556096 TRDCB7Z8K6 153 aa12.44□□□□□ -0.42
VPS33B-205ENST00000556096 ATP6V1G2-DDX39BF2Z307 99 aa12.44□□□□□ -0.42
VPS33B-205ENST00000556096 H7C1Q1 480 aa12.44□□□□□ -0.42
VPS33B-205ENST00000556096 OR2H2O95918 312 aa12.44□□□□□ -0.42
VPS33B-205ENST00000556096 CTXN2P0C2S0 81 aa12.44□□□□□ -0.42
VPS33B-205ENST00000556096 POLEQ07864 2286 aa12.44□□□□□ -0.42
VPS33B-205ENST00000556096 PRR14LQ5THK1 2151 aa12.44□□□□□ -0.42
VPS33B-205ENST00000556096 WDR82Q6UXN9 313 aa12.44□□□□□ -0.42
VPS33B-205ENST00000556096 ASCC1Q8N9N2 400 aaKnown RBP12.44□□□□□ -0.42
VPS33B-205ENST00000556096 GALNT11Q8NCW6 608 aa12.44□□□□□ -0.42
VPS33B-205ENST00000556096 NUP37Q8NFH4 326 aa12.44□□□□□ -0.42
VPS33B-205ENST00000556096 MRPL30Q8TCC3 161 aaKnown RBP12.44□□□□□ -0.42
VPS33B-205ENST00000556096 SLC23A1Q9UHI7 598 aa12.44□□□□□ -0.42
VPS33B-205ENST00000556096 GLS2Q9UI32 602 aa12.44□□□□□ -0.42
VPS33B-205ENST00000556096 SLC33A1O00400 549 aaPredicted RBP12.43□□□□□ -0.42
VPS33B-205ENST00000556096 HSPB6O14558 160 aa12.43□□□□□ -0.42
VPS33B-205ENST00000556096 RPS2P15880 293 aaKnown RBP12.43□□□□□ -0.42
VPS33B-205ENST00000556096 PI3P19957 117 aa12.43□□□□□ -0.42
VPS33B-205ENST00000556096 LMO1P25800 156 aa12.43□□□□□ -0.42
VPS33B-205ENST00000556096 FCGR2CP31995 323 aa12.43□□□□□ -0.42
VPS33B-205ENST00000556096 SELENOVP59797 346 aa12.43□□□□□ -0.42
VPS33B-205ENST00000556096 SUPT4H1P63272 117 aaKnown RBP12.43□□□□□ -0.42
VPS33B-205ENST00000556096 PRAMEF6Q5VXH4 476 aa12.43□□□□□ -0.42
VPS33B-205ENST00000556096 CLEC18BQ6UXF7 455 aa12.43□□□□□ -0.42
VPS33B-205ENST00000556096 GAPTQ8N292 157 aa12.43□□□□□ -0.42
VPS33B-205ENST00000556096 CASTOR1Q8WTX7 329 aa12.43□□□□□ -0.42
VPS33B-205ENST00000556096 MOB3AQ96BX8 217 aa12.43□□□□□ -0.42
VPS33B-205ENST00000556096 WDR89Q96FK6 387 aaPredicted RBP12.43□□□□□ -0.42
VPS33B-205ENST00000556096 TMEM165Q9HC07 324 aa12.43□□□□□ -0.42
VPS33B-205ENST00000556096 HEATR1Q9H583 2144 aaKnown RBP12.43□□□□□ -0.42
VPS33B-205ENST00000556096 PCNX1Q96RV3 2341 aa12.43□□□□□ -0.42
VPS33B-205ENST00000556096 PLSCR5A0PG75 271 aa12.42□□□□□ -0.42
VPS33B-205ENST00000556096 A6NLC8 198 aa12.42□□□□□ -0.42
VPS33B-205ENST00000556096 C3orf80F5H4A9 247 aa12.42□□□□□ -0.42
VPS33B-205ENST00000556096 CD8AP01732 235 aa12.42□□□□□ -0.42
VPS33B-205ENST00000556096 THBDP07204 575 aa12.42□□□□□ -0.42
VPS33B-205ENST00000556096 ZNF728P0DKX0 622 aa12.42□□□□□ -0.42
VPS33B-205ENST00000556096 CFHR2P36980 270 aa12.42□□□□□ -0.42
VPS33B-205ENST00000556096 PAN3Q58A45 887 aaKnown RBP12.42□□□□□ -0.42
VPS33B-205ENST00000556096 ZNF826PQ6ZT77 177 aa12.42□□□□□ -0.42
VPS33B-205ENST00000556096 OR2Z1Q8NG97 314 aa12.42□□□□□ -0.42
VPS33B-205ENST00000556096 OR10Z1Q8NGY1 313 aa12.42□□□□□ -0.42
VPS33B-205ENST00000556096 COQ8AQ8NI60 647 aa12.42□□□□□ -0.42
VPS33B-205ENST00000556096 PIK3IP1Q96FE7 263 aa12.42□□□□□ -0.42
VPS33B-205ENST00000556096 FXYD6Q9H0Q3 95 aa12.42□□□□□ -0.42
VPS33B-205ENST00000556096 IGHV3-64DA0A0J9YX35 117 aa12.42□□□□□ -0.42
VPS33B-205ENST00000556096 HAND1O96004 215 aa12.42□□□□□ -0.42
VPS33B-205ENST00000556096 SEC61A1P61619 476 aaKnown RBP12.42□□□□□ -0.42
VPS33B-205ENST00000556096 LGALSLQ3ZCW2 172 aaPredicted RBP12.42□□□□□ -0.42
VPS33B-205ENST00000556096 IGSF11Q5DX21 431 aa12.42□□□□□ -0.42
VPS33B-205ENST00000556096 ACP7Q6ZNF0 438 aa12.42□□□□□ -0.42
VPS33B-205ENST00000556096 ZNF497Q6ZNH5 498 aa12.42□□□□□ -0.42
VPS33B-205ENST00000556096 GRPEL2Q8TAA5 225 aa12.42□□□□□ -0.42
VPS33B-205ENST00000556096 RASL12Q9NYN1 266 aa12.42□□□□□ -0.42
VPS33B-205ENST00000556096 DPRXA6NFQ7 191 aa12.41□□□□□ -0.42
VPS33B-205ENST00000556096 CRYM-AS1A6NIL9 109 aa12.41□□□□□ -0.42
VPS33B-205ENST00000556096 ZSCAN5BA6NJL1 495 aa12.41□□□□□ -0.42
VPS33B-205ENST00000556096 HMSDA8MTL9 139 aa12.41□□□□□ -0.42
VPS33B-205ENST00000556096 SIRPB1O00241 398 aa12.41□□□□□ -0.42
VPS33B-205ENST00000556096 CCL21O00585 134 aa12.41□□□□□ -0.42
VPS33B-205ENST00000556096 KNG1P01042 644 aa12.41□□□□□ -0.42
VPS33B-205ENST00000556096 TK1P04183 234 aa12.41□□□□□ -0.42
VPS33B-205ENST00000556096 SCTP09683 121 aa12.41□□□□□ -0.42
VPS33B-205ENST00000556096 GMFBP60983 142 aa12.41□□□□□ -0.42
VPS33B-205ENST00000556096 HERV-K104P61576 105 aa12.41□□□□□ -0.42
VPS33B-205ENST00000556096 SNRPD2P62316 118 aaKnown RBP12.41□□□□□ -0.42
VPS33B-205ENST00000556096 FGL1Q08830 312 aa12.41□□□□□ -0.42
VPS33B-205ENST00000556096 VHLLQ6RSH7 139 aa12.41□□□□□ -0.42
VPS33B-205ENST00000556096 C20orf204Q6ZNR8 217 aa12.41□□□□□ -0.42
VPS33B-205ENST00000556096 KCTD9Q7L273 389 aa12.41□□□□□ -0.42
VPS33B-205ENST00000556096 MOB1BQ7L9L4 216 aa12.41□□□□□ -0.42
VPS33B-205ENST00000556096 WFDC8Q8IUA0 241 aa12.41□□□□□ -0.42
VPS33B-205ENST00000556096 SGPP2Q8IWX5 399 aa12.41□□□□□ -0.42
VPS33B-205ENST00000556096 SLC38A6Q8IZM9 456 aa12.41□□□□□ -0.42
VPS33B-205ENST00000556096 OR4A4PQ8NGN8 299 aa12.41□□□□□ -0.42
VPS33B-205ENST00000556096 MRPL24Q96A35 216 aaKnown RBP12.41□□□□□ -0.42
VPS33B-205ENST00000556096 SYT3Q9BQG1 590 aa12.41□□□□□ -0.42
VPS33B-205ENST00000556096 SEBOXQ9HB31 216 aaPredicted RBP12.41□□□□□ -0.42
VPS33B-205ENST00000556096 RAB18Q9NP72 206 aa12.41□□□□□ -0.42
VPS33B-205ENST00000556096 UFSP2Q9NUQ7 469 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms