RNA–Protein interactions for RNA: ENST00000556029.5

TMPO-212, Transcript of thymopoietin, human

TSL 1 (best) BASIC

Gene TMPO, Length 4,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMPO-212	ENST00000556029	SNRPC	P09234	159 aa	Known RBP	10.79	□□□□□ -0.68
TMPO-212	ENST00000556029	METTL15P1	P0C7V9	234 aa		10.79	□□□□□ -0.68
TMPO-212	ENST00000556029	OR8G1	Q15617	311 aa		10.79	□□□□□ -0.68
TMPO-212	ENST00000556029	SPINK14	Q6IE38	97 aa		10.79	□□□□□ -0.68
TMPO-212	ENST00000556029	OR5C1	Q8NGR4	320 aa		10.79	□□□□□ -0.68
TMPO-212	ENST00000556029	MRPS24	Q96EL2	167 aa	Known RBP	10.79	□□□□□ -0.68
TMPO-212	ENST00000556029	ADGRG7	Q96K78	797 aa		10.79	□□□□□ -0.68
TMPO-212	ENST00000556029	ZNF107	Q9UII5	783 aa	Predicted RBP	10.79	□□□□□ -0.68
TMPO-212	ENST00000556029	ZNF835	Q9Y2P0	537 aa		10.79	□□□□□ -0.68
TMPO-212	ENST00000556029	CDH23	Q9H251	3354 aa		10.78	□□□□□ -0.68
TMPO-212	ENST00000556029	CD74	P04233	296 aa		10.78	□□□□□ -0.68
TMPO-212	ENST00000556029	HNRNPA3	P51991	378 aa	Known RBP	10.78	□□□□□ -0.68
TMPO-212	ENST00000556029	TMEM267	Q0VDI3	215 aa	Predicted RBP	10.78	□□□□□ -0.68
TMPO-212	ENST00000556029	PJVK	Q0ZLH3	352 aa		10.78	□□□□□ -0.68
TMPO-212	ENST00000556029	ACER2	Q5QJU3	275 aa		10.78	□□□□□ -0.68
TMPO-212	ENST00000556029	C1orf100	Q5SVJ3	147 aa		10.78	□□□□□ -0.68
TMPO-212	ENST00000556029	THEM4	Q5T1C6	240 aa		10.78	□□□□□ -0.68
TMPO-212	ENST00000556029	DEGS2	Q6QHC5	323 aa		10.78	□□□□□ -0.68
TMPO-212	ENST00000556029	BTNL8	Q6UX41	500 aa		10.78	□□□□□ -0.68
TMPO-212	ENST00000556029	NDRG3	Q9UGV2	375 aa		10.78	□□□□□ -0.68
TMPO-212	ENST00000556029	SPAAR	A0A1B0GVQ0	90 aa		10.78	□□□□□ -0.68
TMPO-212	ENST00000556029	MB	P02144	154 aa		10.78	□□□□□ -0.68
TMPO-212	ENST00000556029	ETFRF1	Q6IPR1	90 aa		10.78	□□□□□ -0.68
TMPO-212	ENST00000556029	ZDHHC22	Q8N966	263 aa		10.78	□□□□□ -0.68
TMPO-212	ENST00000556029	ERRFI1	Q9UJM3	462 aa	Predicted RBP	10.78	□□□□□ -0.68
TMPO-212	ENST00000556029	MS4A18	H0YCH9	400 aa		10.78	□□□□□ -0.68
TMPO-212	ENST00000556029	TCAP	O15273	167 aa		10.78	□□□□□ -0.68
TMPO-212	ENST00000556029	NPIPB7	O75200	414 aa		10.78	□□□□□ -0.68
TMPO-212	ENST00000556029	ISG15	P05161	165 aa		10.78	□□□□□ -0.68
TMPO-212	ENST00000556029	ZNF735	P0CB33	412 aa		10.78	□□□□□ -0.68
TMPO-212	ENST00000556029	NOVA1	P51513	510 aa	Known RBP	10.78	□□□□□ -0.68
TMPO-212	ENST00000556029	GPM6A	P51674	278 aa		10.78	□□□□□ -0.68
TMPO-212	ENST00000556029	KISS1	Q15726	138 aa		10.78	□□□□□ -0.68
TMPO-212	ENST00000556029	MS4A18	Q3C1V0	323 aa		10.78	□□□□□ -0.68
TMPO-212	ENST00000556029	ZNF260	Q3ZCT1	412 aa		10.78	□□□□□ -0.68
TMPO-212	ENST00000556029	ZNF880	Q6PDB4	577 aa		10.78	□□□□□ -0.68
TMPO-212	ENST00000556029	ADAD2	Q8NCV1	583 aa	Known RBP	10.78	□□□□□ -0.68
TMPO-212	ENST00000556029	OR10V1	Q8NGI7	309 aa		10.78	□□□□□ -0.68
TMPO-212	ENST00000556029	SAP25	Q8TEE9	199 aa		10.78	□□□□□ -0.68
TMPO-212	ENST00000556029	ADAT3	Q96EY9	351 aa	Predicted RBP	10.78	□□□□□ -0.68
TMPO-212	ENST00000556029	ACY3	Q96HD9	319 aa		10.78	□□□□□ -0.68
TMPO-212	ENST00000556029	DMRTA2	Q96SC8	542 aa		10.78	□□□□□ -0.68
TMPO-212	ENST00000556029	RAB33B	Q9H082	229 aa		10.78	□□□□□ -0.68
TMPO-212	ENST00000556029	ZNF586	Q9NXT0	402 aa		10.78	□□□□□ -0.68
TMPO-212	ENST00000556029	TIMM10B	Q9Y5J6	103 aa		10.78	□□□□□ -0.68
TMPO-212	ENST00000556029	TRAV39	A0A0B4J263	110 aa		10.77	□□□□□ -0.68
TMPO-212	ENST00000556029	CD8A	P01732	235 aa		10.77	□□□□□ -0.68
TMPO-212	ENST00000556029	MELTF	P08582	738 aa		10.77	□□□□□ -0.68
TMPO-212	ENST00000556029	CT45A6	P0DMU7	189 aa		10.77	□□□□□ -0.68
TMPO-212	ENST00000556029	CT45A5	P0DMU8	189 aa		10.77	□□□□□ -0.68
TMPO-212	ENST00000556029	CT45A7	P0DMV0	189 aa		10.77	□□□□□ -0.68
TMPO-212	ENST00000556029	CCL3	P10147	92 aa		10.77	□□□□□ -0.68
TMPO-212	ENST00000556029	ZNF17	P17021	662 aa		10.77	□□□□□ -0.68
TMPO-212	ENST00000556029	POLR2G	P62487	172 aa	Known RBP eCLIP	10.77	□□□□□ -0.68
TMPO-212	ENST00000556029	CT45A1	Q5HYN5	189 aa		10.77	□□□□□ -0.68
TMPO-212	ENST00000556029	JMJD6	Q6NYC1	403 aa	Predicted RBP	10.77	□□□□□ -0.68
TMPO-212	ENST00000556029	CT45A3	Q8NHU0	189 aa		10.77	□□□□□ -0.68
TMPO-212	ENST00000556029	AQP3	Q92482	292 aa		10.77	□□□□□ -0.68
TMPO-212	ENST00000556029	PTX4	Q96A99	478 aa		10.77	□□□□□ -0.68
TMPO-212	ENST00000556029	FBXL17	Q9UF56	701 aa		10.77	□□□□□ -0.68
TMPO-212	ENST00000556029	FREM3	P0C091	2139 aa		10.77	□□□□□ -0.69
TMPO-212	ENST00000556029	CCDC187	A0A096LP49	1063 aa		10.77	□□□□□ -0.69
TMPO-212	ENST00000556029	CRYM-AS1	A6NIL9	109 aa		10.77	□□□□□ -0.69
TMPO-212	ENST00000556029	VSIG8	P0DPA2	414 aa		10.77	□□□□□ -0.69
TMPO-212	ENST00000556029	ZBTB25	P24278	435 aa		10.77	□□□□□ -0.69
TMPO-212	ENST00000556029	CFP	P27918	469 aa		10.77	□□□□□ -0.69
TMPO-212	ENST00000556029	GPR12	P47775	334 aa		10.77	□□□□□ -0.69
TMPO-212	ENST00000556029	COL19A1	Q14993	1142 aa		10.77	□□□□□ -0.69
TMPO-212	ENST00000556029	RNF133	Q8WVZ7	376 aa		10.77	□□□□□ -0.69
TMPO-212	ENST00000556029	TAAR9	Q96RI9	348 aa		10.77	□□□□□ -0.69
TMPO-212	ENST00000556029	RAB9B	Q9NP90	201 aa		10.77	□□□□□ -0.69
TMPO-212	ENST00000556029	KCNIP2	Q9NS61	270 aa		10.77	□□□□□ -0.69
TMPO-212	ENST00000556029	SLC35D1	Q9NTN3	355 aa		10.77	□□□□□ -0.69
TMPO-212	ENST00000556029	STRAP	Q9Y3F4	350 aa	Known RBP	10.77	□□□□□ -0.69
TMPO-212	ENST00000556029	IGKV1D-43	A0A0B4J1Z2	117 aa		10.77	□□□□□ -0.69
TMPO-212	ENST00000556029	CHEK1	O14757	476 aa		10.77	□□□□□ -0.69
TMPO-212	ENST00000556029	ZNHIT1	O43257	154 aa		10.77	□□□□□ -0.69
TMPO-212	ENST00000556029	IGHM	P01871	453 aa		10.77	□□□□□ -0.69
TMPO-212	ENST00000556029	RAB13	P51153	203 aa		10.77	□□□□□ -0.69
TMPO-212	ENST00000556029	MMP16	P51512	607 aa		10.77	□□□□□ -0.69
TMPO-212	ENST00000556029	ERVFC1-1	P60608	527 aa		10.77	□□□□□ -0.69
TMPO-212	ENST00000556029	DEFB109B	Q30KR1	87 aa		10.77	□□□□□ -0.69
TMPO-212	ENST00000556029	UNC80	Q8N2C7	3258 aa		10.77	□□□□□ -0.69
TMPO-212	ENST00000556029		A0A1W2PPH5	198 aa		10.76	□□□□□ -0.69
TMPO-212	ENST00000556029	BMPR1B	O00238	502 aa		10.76	□□□□□ -0.69
TMPO-212	ENST00000556029	ZNF345	Q14585	488 aa		10.76	□□□□□ -0.69
TMPO-212	ENST00000556029	ADPRHL1	Q8NDY3	354 aa		10.76	□□□□□ -0.69
TMPO-212	ENST00000556029	OR2Y1	Q8NGV0	311 aa		10.76	□□□□□ -0.69
TMPO-212	ENST00000556029	CT55	Q8WUE5	264 aa		10.76	□□□□□ -0.69
TMPO-212	ENST00000556029	FAM122A	Q96E09	287 aa		10.76	□□□□□ -0.69
TMPO-212	ENST00000556029	WBP1	Q96G27	269 aa		10.76	□□□□□ -0.69
TMPO-212	ENST00000556029	ACTR3C	Q9C0K3	210 aa	Predicted RBP	10.76	□□□□□ -0.69
TMPO-212	ENST00000556029	PILRB	Q9UKJ0	227 aa		10.76	□□□□□ -0.69
TMPO-212	ENST00000556029	OR2J3	O76001	311 aa		10.76	□□□□□ -0.69
TMPO-212	ENST00000556029	TMEM33	P57088	247 aa		10.76	□□□□□ -0.69
TMPO-212	ENST00000556029	DHRS7B	Q6IAN0	325 aa	Predicted RBP	10.76	□□□□□ -0.69
TMPO-212	ENST00000556029	ATRAID	Q6UW56	229 aa		10.76	□□□□□ -0.69
TMPO-212	ENST00000556029	SMIM15	Q7Z3B0	74 aa		10.76	□□□□□ -0.69
TMPO-212	ENST00000556029	OSR2	Q8N2R0	312 aa		10.76	□□□□□ -0.69
TMPO-212	ENST00000556029	EXTL1	Q92935	676 aa		10.76	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms