RNA–Protein interactions for RNA: ENST00000555550.1

SCFD1-216, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-216ENST00000555550 DSTQ03001 7570 aaKnown RBP0.88□□□□□ -2.27
SCFD1-216ENST00000555550 TVP23AA6NH52 213 aa0.87□□□□□ -2.27
SCFD1-216ENST00000555550 M0R1B8 84 aa0.87□□□□□ -2.27
SCFD1-216ENST00000555550 NEMFO60524 1076 aa0.87□□□□□ -2.27
SCFD1-216ENST00000555550 SHOX2O60902 331 aaPredicted RBP0.87□□□□□ -2.27
SCFD1-216ENST00000555550 SCN2BO60939 215 aa0.87□□□□□ -2.27
SCFD1-216ENST00000555550 PDYNP01213 254 aa0.87□□□□□ -2.27
SCFD1-216ENST00000555550 SCGB1C2P0DMR2 95 aa0.87□□□□□ -2.27
SCFD1-216ENST00000555550 OR12D1P0DN82 309 aa0.87□□□□□ -2.27
SCFD1-216ENST00000555550 CD9P21926 228 aa0.87□□□□□ -2.27
SCFD1-216ENST00000555550 S100A2P29034 98 aa0.87□□□□□ -2.27
SCFD1-216ENST00000555550 EMP2P54851 167 aa0.87□□□□□ -2.27
SCFD1-216ENST00000555550 OR10A3P58181 314 aa0.87□□□□□ -2.27
SCFD1-216ENST00000555550 SLC35B1P78383 322 aa0.87□□□□□ -2.27
SCFD1-216ENST00000555550 C2orf80Q0P641 193 aa0.87□□□□□ -2.27
SCFD1-216ENST00000555550 ST3GAL4Q11206 333 aa0.87□□□□□ -2.27
SCFD1-216ENST00000555550 SS18Q15532 418 aa0.87□□□□□ -2.27
SCFD1-216ENST00000555550 TOMM34Q15785 309 aaPredicted RBP0.87□□□□□ -2.27
SCFD1-216ENST00000555550 VAMP3Q15836 100 aa0.87□□□□□ -2.27
SCFD1-216ENST00000555550 TAL2Q16559 108 aa0.87□□□□□ -2.27
SCFD1-216ENST00000555550 NDUFAF6Q330K2 333 aa0.87□□□□□ -2.27
SCFD1-216ENST00000555550 FBXO48Q5FWF7 155 aa0.87□□□□□ -2.27
SCFD1-216ENST00000555550 FAM27D1Q5T7N8 215 aa0.87□□□□□ -2.27
SCFD1-216ENST00000555550 N4BP2L1Q5TBK1 243 aaPredicted RBP0.87□□□□□ -2.27
SCFD1-216ENST00000555550 NIPAL1Q6NVV3 410 aa0.87□□□□□ -2.27
SCFD1-216ENST00000555550 FAHD1Q6P587 224 aa0.87□□□□□ -2.27
SCFD1-216ENST00000555550 RBM45Q8IUH3 476 aaKnown RBP0.87□□□□□ -2.27
SCFD1-216ENST00000555550 MUC15Q8N387 334 aa0.87□□□□□ -2.27
SCFD1-216ENST00000555550 OR5T3Q8NGG3 340 aa0.87□□□□□ -2.27
SCFD1-216ENST00000555550 NT5CQ8TCD5 201 aa0.87□□□□□ -2.27
SCFD1-216ENST00000555550 SCGB1C1Q8TD33 95 aa0.87□□□□□ -2.27
SCFD1-216ENST00000555550 OR5P2Q8WZ92 322 aa0.87□□□□□ -2.27
SCFD1-216ENST00000555550 CENPNQ96H22 339 aaPredicted RBP0.87□□□□□ -2.27
SCFD1-216ENST00000555550 ACBD6Q9BR61 282 aa0.87□□□□□ -2.27
SCFD1-216ENST00000555550 SHCBP1LQ9BZQ2 653 aa0.87□□□□□ -2.27
SCFD1-216ENST00000555550 TM6SF2Q9BZW4 377 aa0.87□□□□□ -2.27
SCFD1-216ENST00000555550 CXCL16Q9H2A7 254 aa0.87□□□□□ -2.27
SCFD1-216ENST00000555550 OR52A5Q9H2C5 316 aa0.87□□□□□ -2.27
SCFD1-216ENST00000555550 XKR8Q9H6D3 395 aa0.87□□□□□ -2.27
SCFD1-216ENST00000555550 SDHAF3Q9NRP4 125 aa0.87□□□□□ -2.27
SCFD1-216ENST00000555550 MRM2Q9UI43 246 aaKnown RBP0.87□□□□□ -2.27
SCFD1-216ENST00000555550 NXT1Q9UKK6 140 aaKnown RBP0.87□□□□□ -2.27
SCFD1-216ENST00000555550 MYO15BQ96JP2 1530 aa0.86□□□□□ -2.27
SCFD1-216ENST00000555550 FAM240AA0A1B0GVK7 77 aa0.86□□□□□ -2.27
SCFD1-216ENST00000555550 A0A1W2PQL4 384 aaPredicted RBP0.86□□□□□ -2.27
SCFD1-216ENST00000555550 FNDC10F2Z333 226 aa0.86□□□□□ -2.27
SCFD1-216ENST00000555550 F8VP50 259 aa0.86□□□□□ -2.27
SCFD1-216ENST00000555550 PRMT5O14744 637 aaPredicted RBP0.86□□□□□ -2.27
SCFD1-216ENST00000555550 TCAPO15273 167 aa0.86□□□□□ -2.27
SCFD1-216ENST00000555550 GATCO43716 136 aaKnown RBP0.86□□□□□ -2.27
SCFD1-216ENST00000555550 SH2D1AO60880 128 aa0.86□□□□□ -2.27
SCFD1-216ENST00000555550 GPR75O95800 540 aa0.86□□□□□ -2.27
SCFD1-216ENST00000555550 MBP02144 154 aa0.86□□□□□ -2.27
SCFD1-216ENST00000555550 GUSBP08236 651 aa0.86□□□□□ -2.27
SCFD1-216ENST00000555550 OR5AL1P0C617 328 aa0.86□□□□□ -2.27
SCFD1-216ENST00000555550 LIPCP11150 499 aa0.86□□□□□ -2.27
SCFD1-216ENST00000555550 PTNP21246 168 aa0.86□□□□□ -2.27
SCFD1-216ENST00000555550 PSMD4P55036 377 aaKnown RBP0.86□□□□□ -2.27
SCFD1-216ENST00000555550 C1QTNF8P60827 252 aa0.86□□□□□ -2.27
SCFD1-216ENST00000555550 XRCC4Q13426 336 aa0.86□□□□□ -2.27
SCFD1-216ENST00000555550 GUSBP1Q15486 140 aa0.86□□□□□ -2.27
SCFD1-216ENST00000555550 ATP6V1FQ16864 119 aa0.86□□□□□ -2.27
SCFD1-216ENST00000555550 CA13Q8N1Q1 262 aa0.86□□□□□ -2.27
SCFD1-216ENST00000555550 TCAIMQ8N3R3 496 aa0.86□□□□□ -2.27
SCFD1-216ENST00000555550 OR4C16Q8NGL9 310 aa0.86□□□□□ -2.27
SCFD1-216ENST00000555550 DDIT4LQ96D03 193 aa0.86□□□□□ -2.27
SCFD1-216ENST00000555550 QKIQ96PU8 341 aaKnown RBP eCLIP0.86□□□□□ -2.27
SCFD1-216ENST00000555550 ANAPC13Q9BS18 74 aa0.86□□□□□ -2.27
SCFD1-216ENST00000555550 PRRG3Q9BZD7 231 aa0.86□□□□□ -2.27
SCFD1-216ENST00000555550 PRORYQ9H606 182 aa0.86□□□□□ -2.27
SCFD1-216ENST00000555550 ARMC7Q9H6L4 198 aa0.86□□□□□ -2.27
SCFD1-216ENST00000555550 PLEKHA1Q9HB21 404 aa0.86□□□□□ -2.27
SCFD1-216ENST00000555550 RBM12B-AS1Q9P1G2 102 aa0.86□□□□□ -2.27
SCFD1-216ENST00000555550 C14orf166Q9Y224 244 aaKnown RBP0.86□□□□□ -2.27
SCFD1-216ENST00000555550 EIF4G1Q04637 1599 aaKnown RBP0.86□□□□□ -2.27
SCFD1-216ENST00000555550 UBR4Q5T4S7 5183 aa0.85□□□□□ -2.27
SCFD1-216ENST00000555550 LOC100506127A0A0U1RQW1 187 aa0.85□□□□□ -2.27
SCFD1-216ENST00000555550 A0A1W2PRG6 482 aa0.85□□□□□ -2.27
SCFD1-216ENST00000555550 SLC5A10A0PJK1 596 aa0.85□□□□□ -2.27
SCFD1-216ENST00000555550 RNASEK-C17orf49H0YIS7 233 aa0.85□□□□□ -2.27
SCFD1-216ENST00000555550 PSMD11O00231 422 aa0.85□□□□□ -2.27
SCFD1-216ENST00000555550 ZNF593O00488 134 aaPredicted RBP0.85□□□□□ -2.27
SCFD1-216ENST00000555550 PLPP3O14495 311 aa0.85□□□□□ -2.27
SCFD1-216ENST00000555550 EEF1E1O43324 174 aaKnown RBP0.85□□□□□ -2.27
SCFD1-216ENST00000555550 NDUFS6O75380 124 aaKnown RBP0.85□□□□□ -2.27
SCFD1-216ENST00000555550 S100A9P06702 114 aaKnown RBP0.85□□□□□ -2.27
SCFD1-216ENST00000555550 SOD3P08294 240 aa0.85□□□□□ -2.27
SCFD1-216ENST00000555550 NOS1P29475 1434 aa0.85□□□□□ -2.27
SCFD1-216ENST00000555550 CD151P48509 253 aa0.85□□□□□ -2.27
SCFD1-216ENST00000555550 OR2B6P58173 313 aa0.85□□□□□ -2.27
SCFD1-216ENST00000555550 HES1Q14469 280 aa0.85□□□□□ -2.27
SCFD1-216ENST00000555550 CASP8Q14790 479 aa0.85□□□□□ -2.27
SCFD1-216ENST00000555550 Q3ZCU0 254 aa0.85□□□□□ -2.27
SCFD1-216ENST00000555550 IDNKQ5T6J7 187 aa0.85□□□□□ -2.27
SCFD1-216ENST00000555550 RESP18Q5W5W9 173 aa0.85□□□□□ -2.27
SCFD1-216ENST00000555550 UGT2A3Q6UWM9 527 aa0.85□□□□□ -2.27
SCFD1-216ENST00000555550 SCXQ7RTU7 201 aa0.85□□□□□ -2.27
SCFD1-216ENST00000555550 ST13P4Q8IZP2 240 aaPredicted RBP0.85□□□□□ -2.27
SCFD1-216ENST00000555550 ARHGAP18Q8N392 663 aa0.85□□□□□ -2.27
SCFD1-216ENST00000555550 SPICQ8N5J4 248 aa0.85□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms