RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 DYNC1I2Q13409 638 aaKnown RBP9.88□□□□□ -0.83
SRP54-206ENST00000555317 TPBGQ13641 420 aa9.88□□□□□ -0.83
SRP54-206ENST00000555317 INSL4Q14641 139 aa9.88□□□□□ -0.83
SRP54-206ENST00000555317 MPV17LQ2QL34 196 aa9.88□□□□□ -0.83
SRP54-206ENST00000555317 NHLRC3Q5JS37 347 aa9.88□□□□□ -0.83
SRP54-206ENST00000555317 ATAD3CQ5T2N8 411 aa9.88□□□□□ -0.83
SRP54-206ENST00000555317 C16orf87Q6PH81 154 aa9.88□□□□□ -0.83
SRP54-206ENST00000555317 LDLRAD3Q86YD5 345 aa9.88□□□□□ -0.83
SRP54-206ENST00000555317 OR4D6Q8NGJ1 314 aa9.88□□□□□ -0.83
SRP54-206ENST00000555317 C1orf147Q96MC9 270 aaPredicted RBP9.88□□□□□ -0.83
SRP54-206ENST00000555317 DPCDQ9BVM2 203 aaPredicted RBP9.88□□□□□ -0.83
SRP54-206ENST00000555317 YTHDF1Q9BYJ9 559 aaKnown RBP9.88□□□□□ -0.83
SRP54-206ENST00000555317 CST11Q9H112 138 aa9.88□□□□□ -0.83
SRP54-206ENST00000555317 SPACA1Q9HBV2 294 aa9.88□□□□□ -0.83
SRP54-206ENST00000555317 ZNRD1Q9P1U0 126 aa9.88□□□□□ -0.83
SRP54-206ENST00000555317 SESN1Q9Y6P5 492 aa9.88□□□□□ -0.83
SRP54-206ENST00000555317 MEIKINA0A087WXM9 373 aa9.87□□□□□ -0.83
SRP54-206ENST00000555317 TRAV24A0A0B4J272 114 aa9.87□□□□□ -0.83
SRP54-206ENST00000555317 H3BUI4 141 aa9.87□□□□□ -0.83
SRP54-206ENST00000555317 GEMIN2O14893 280 aaKnown RBP9.87□□□□□ -0.83
SRP54-206ENST00000555317 IGHV4-59P01825 116 aa9.87□□□□□ -0.83
SRP54-206ENST00000555317 UBBP0CG47 229 aa9.87□□□□□ -0.83
SRP54-206ENST00000555317 SRMP19623 302 aa9.87□□□□□ -0.83
SRP54-206ENST00000555317 GABRA5P31644 462 aa9.87□□□□□ -0.83
SRP54-206ENST00000555317 IER3P46695 156 aa9.87□□□□□ -0.83
SRP54-206ENST00000555317 DLX6P56179 175 aa9.87□□□□□ -0.83
SRP54-206ENST00000555317 FOXL1Q12952 345 aa9.87□□□□□ -0.83
SRP54-206ENST00000555317 FAM27D1Q5T7N8 215 aa9.87□□□□□ -0.83
SRP54-206ENST00000555317 OR52W1Q6IF63 320 aa9.87□□□□□ -0.83
SRP54-206ENST00000555317 UNQ9370/PRO34162Q6UXP9 181 aa9.87□□□□□ -0.83
SRP54-206ENST00000555317 TCF23Q7RTU1 214 aa9.87□□□□□ -0.83
SRP54-206ENST00000555317 ZNF565Q8N9K5 539 aa9.87□□□□□ -0.83
SRP54-206ENST00000555317 SUMF2Q8NBJ7 301 aa9.87□□□□□ -0.83
SRP54-206ENST00000555317 Q8NFD4 153 aa9.87□□□□□ -0.83
SRP54-206ENST00000555317 OR5R1Q8NH85 324 aa9.87□□□□□ -0.83
SRP54-206ENST00000555317 MRPS24Q96EL2 167 aaKnown RBP9.87□□□□□ -0.83
SRP54-206ENST00000555317 IFT22Q9H7X7 185 aa9.87□□□□□ -0.83
SRP54-206ENST00000555317 ACOT13Q9NPJ3 140 aa9.87□□□□□ -0.83
SRP54-206ENST00000555317 TAS2R3Q9NYW6 316 aa9.87□□□□□ -0.83
SRP54-206ENST00000555317 GHRLQ9UBU3 117 aa9.87□□□□□ -0.83
SRP54-206ENST00000555317 TMEM89A2RUT3 159 aa9.86□□□□□ -0.83
SRP54-206ENST00000555317 FAM181BA6NEQ2 426 aa9.86□□□□□ -0.83
SRP54-206ENST00000555317 ZNF729A6NN14 1252 aaPredicted RBP9.86□□□□□ -0.83
SRP54-206ENST00000555317 UCHL1P09936 223 aa9.86□□□□□ -0.83
SRP54-206ENST00000555317 HKR1P10072 659 aa9.86□□□□□ -0.83
SRP54-206ENST00000555317 MGMTP16455 207 aa9.86□□□□□ -0.83
SRP54-206ENST00000555317 CDK2P24941 298 aa9.86□□□□□ -0.83
SRP54-206ENST00000555317 RANBP1P43487 201 aa9.86□□□□□ -0.83
SRP54-206ENST00000555317 TAF9Q16594 264 aa9.86□□□□□ -0.83
SRP54-206ENST00000555317 PRAMEF5Q5TYX0 476 aa9.86□□□□□ -0.83
SRP54-206ENST00000555317 HCP5Q6MZN7 132 aa9.86□□□□□ -0.83
SRP54-206ENST00000555317 GDPGP1Q6ZNW5 385 aa9.86□□□□□ -0.83
SRP54-206ENST00000555317 C11orf42Q8N5U0 333 aa9.86□□□□□ -0.83
SRP54-206ENST00000555317 C3orf56Q8N813 242 aa9.86□□□□□ -0.83
SRP54-206ENST00000555317 BEND2Q8NDZ0 799 aa9.86□□□□□ -0.83
SRP54-206ENST00000555317 NDNFQ8TB73 568 aa9.86□□□□□ -0.83
SRP54-206ENST00000555317 DYRK2Q92630 601 aa9.86□□□□□ -0.83
SRP54-206ENST00000555317 FCGR1BQ92637 280 aa9.86□□□□□ -0.83
SRP54-206ENST00000555317 CORO2AQ92828 525 aa9.86□□□□□ -0.83
SRP54-206ENST00000555317 COQ2Q96H96 371 aa9.86□□□□□ -0.83
SRP54-206ENST00000555317 CLEC7AQ9BXN2 247 aa9.86□□□□□ -0.83
SRP54-206ENST00000555317 CHIAQ9BZP6 476 aa9.86□□□□□ -0.83
SRP54-206ENST00000555317 SELENOIQ9C0D9 397 aa9.86□□□□□ -0.83
SRP54-206ENST00000555317 PPIL3Q9H2H8 161 aaKnown RBP9.86□□□□□ -0.83
SRP54-206ENST00000555317 TMEM133Q9H2Q1 129 aa9.86□□□□□ -0.83
SRP54-206ENST00000555317 BANF2Q9H503 90 aa9.86□□□□□ -0.83
SRP54-206ENST00000555317 PLGRKTQ9HBL7 147 aa9.86□□□□□ -0.83
SRP54-206ENST00000555317 KIF25Q9UIL4 384 aa9.86□□□□□ -0.83
SRP54-206ENST00000555317 TBL2Q9Y4P3 447 aaKnown RBP9.86□□□□□ -0.83
SRP54-206ENST00000555317 A0A1W2PP11 408 aa9.85□□□□□ -0.83
SRP54-206ENST00000555317 TMEM30CPA0ZSE6 113 aa9.85□□□□□ -0.83
SRP54-206ENST00000555317 MCRIP1C9JLW8 97 aa9.85□□□□□ -0.83
SRP54-206ENST00000555317 SC5DO75845 299 aa9.85□□□□□ -0.83
SRP54-206ENST00000555317 CALRP27797 417 aaKnown RBP9.85□□□□□ -0.83
SRP54-206ENST00000555317 PSMB9P28065 219 aa9.85□□□□□ -0.83
SRP54-206ENST00000555317 HTR2CP28335 458 aa9.85□□□□□ -0.83
SRP54-206ENST00000555317 RPL15P61313 204 aaKnown RBP9.85□□□□□ -0.83
SRP54-206ENST00000555317 EMX1Q04741 257 aaPredicted RBP9.85□□□□□ -0.83
SRP54-206ENST00000555317 RBM39Q14498 530 aaKnown RBP9.85□□□□□ -0.83
SRP54-206ENST00000555317 LRRC75BQ2VPJ9 315 aa9.85□□□□□ -0.83
SRP54-206ENST00000555317 HEPN1Q6WQI6 88 aa9.85□□□□□ -0.83
SRP54-206ENST00000555317 LRRTM1Q86UE6 522 aa9.85□□□□□ -0.83
SRP54-206ENST00000555317 FAM46BQ96A09 425 aa9.85□□□□□ -0.83
SRP54-206ENST00000555317 ABCB10Q9NRK6 738 aa9.85□□□□□ -0.83
SRP54-206ENST00000555317 NDUFB11Q9NX14 153 aa9.85□□□□□ -0.83
SRP54-206ENST00000555317 VPREB3Q9UKI3 123 aa9.85□□□□□ -0.83
SRP54-206ENST00000555317 IGHV2-26A0A0B4J1V2 119 aa9.84□□□□□ -0.83
SRP54-206ENST00000555317 KBTBD11-OT1A0A1B0GTJ5 212 aa9.84□□□□□ -0.83
SRP54-206ENST00000555317 FAM90A10PA6NDY2 464 aa9.84□□□□□ -0.83
SRP54-206ENST00000555317 FAM90A18PA6NE21 464 aa9.84□□□□□ -0.83
SRP54-206ENST00000555317 FAM90A16PA6NEW6 464 aa9.84□□□□□ -0.83
SRP54-206ENST00000555317 FAM90A20PA6NIJ5 464 aa9.84□□□□□ -0.83
SRP54-206ENST00000555317 FAM90A8PA6NJQ4 464 aa9.84□□□□□ -0.83
SRP54-206ENST00000555317 FAM90A7PA6NKC0 464 aa9.84□□□□□ -0.83
SRP54-206ENST00000555317 FAM90A22PA8MWA6 464 aa9.84□□□□□ -0.83
SRP54-206ENST00000555317 FAM90A12PA8MX19 464 aa9.84□□□□□ -0.83
SRP54-206ENST00000555317 FAM90A5PA8MXJ8 464 aa9.84□□□□□ -0.83
SRP54-206ENST00000555317 FAM90A23PA8MXZ1 464 aa9.84□□□□□ -0.83
SRP54-206ENST00000555317 ODF3BA8MYP8 253 aa9.84□□□□□ -0.83
SRP54-206ENST00000555317 H3BUX3 64 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms