RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 ZNF222Q9UK12 451 aa7.53□□□□□ -1.2
TDP1-210ENST00000554976 IGKV1-6A0A0C4DH72 117 aa7.52□□□□□ -1.21
TDP1-210ENST00000554976 SDCBPO00560 298 aaPredicted RBP7.52□□□□□ -1.21
TDP1-210ENST00000554976 RPL35P42766 123 aaKnown RBP7.52□□□□□ -1.21
TDP1-210ENST00000554976 KCNJ3P48549 501 aa7.52□□□□□ -1.21
TDP1-210ENST00000554976 OR8G1Q15617 311 aa7.52□□□□□ -1.21
TDP1-210ENST00000554976 WDR82Q6UXN9 313 aa7.52□□□□□ -1.21
TDP1-210ENST00000554976 Q8IYB0 196 aa7.52□□□□□ -1.21
TDP1-210ENST00000554976 OR5M8Q8NGP6 311 aa7.52□□□□□ -1.21
TDP1-210ENST00000554976 HEXA-AS1Q9H8Q6 139 aa7.52□□□□□ -1.21
TDP1-210ENST00000554976 ZNF701Q9NV72 531 aaPredicted RBP7.52□□□□□ -1.21
TDP1-210ENST00000554976 EHFQ9NZC4 300 aa7.52□□□□□ -1.21
TDP1-210ENST00000554976 TRAV14DV4A0A0A6YYC5 116 aa7.52□□□□□ -1.21
TDP1-210ENST00000554976 M0R1B8 84 aa7.52□□□□□ -1.21
TDP1-210ENST00000554976 BMP5P22003 454 aa7.52□□□□□ -1.21
TDP1-210ENST00000554976 GLRXP35754 106 aa7.52□□□□□ -1.21
TDP1-210ENST00000554976 NPY4RP50391 375 aa7.52□□□□□ -1.21
TDP1-210ENST00000554976 RAB13P51153 203 aa7.52□□□□□ -1.21
TDP1-210ENST00000554976 KLRB1Q12918 225 aa7.52□□□□□ -1.21
TDP1-210ENST00000554976 C5orf24Q7Z6I8 188 aa7.52□□□□□ -1.21
TDP1-210ENST00000554976 ST6GALNAC3Q8NDV1 305 aa7.52□□□□□ -1.21
TDP1-210ENST00000554976 SEBOXQ9HB31 216 aaPredicted RBP7.52□□□□□ -1.21
TDP1-210ENST00000554976 A0A0B4J2A0 478 aa7.52□□□□□ -1.21
TDP1-210ENST00000554976 PLSCR5A0PG75 271 aa7.52□□□□□ -1.21
TDP1-210ENST00000554976 F5H5P2 479 aa7.52□□□□□ -1.21
TDP1-210ENST00000554976 DUS4LO95620 317 aaKnown RBP7.52□□□□□ -1.21
TDP1-210ENST00000554976 IFNA7P01567 189 aa7.52□□□□□ -1.21
TDP1-210ENST00000554976 FABP1P07148 127 aa7.52□□□□□ -1.21
TDP1-210ENST00000554976 NUP62P37198 522 aaPredicted RBP7.52□□□□□ -1.21
TDP1-210ENST00000554976 CA7P43166 264 aa7.52□□□□□ -1.21
TDP1-210ENST00000554976 AKR1D1P51857 326 aa7.52□□□□□ -1.21
TDP1-210ENST00000554976 PAX5Q02548 391 aa7.52□□□□□ -1.21
TDP1-210ENST00000554976 ZNF718Q3SXZ3 478 aa7.52□□□□□ -1.21
TDP1-210ENST00000554976 LGALSLQ3ZCW2 172 aaPredicted RBP7.52□□□□□ -1.21
TDP1-210ENST00000554976 SPIN3Q5JUX0 258 aa7.52□□□□□ -1.21
TDP1-210ENST00000554976 SLC22A25Q6T423 547 aa7.52□□□□□ -1.21
TDP1-210ENST00000554976 UNQ6126/PRO20091Q6UXV3 157 aa7.52□□□□□ -1.21
TDP1-210ENST00000554976 STX12Q86Y82 276 aa7.52□□□□□ -1.21
TDP1-210ENST00000554976 LDLRAD3Q86YD5 345 aa7.52□□□□□ -1.21
TDP1-210ENST00000554976 C12orf45Q8N5I9 185 aaPredicted RBP7.52□□□□□ -1.21
TDP1-210ENST00000554976 PRR7Q8TB68 274 aa7.52□□□□□ -1.21
TDP1-210ENST00000554976 CABLES2Q9BTV7 478 aa7.52□□□□□ -1.21
TDP1-210ENST00000554976 DPCDQ9BVM2 203 aaPredicted RBP7.52□□□□□ -1.21
TDP1-210ENST00000554976 NECAP2Q9NVZ3 263 aa7.52□□□□□ -1.21
TDP1-210ENST00000554976 SHPKQ9UHJ6 478 aa7.52□□□□□ -1.21
TDP1-210ENST00000554976 FZR1Q9UM11 496 aa7.52□□□□□ -1.21
TDP1-210ENST00000554976 POLDIP2Q9Y2S7 368 aa7.52□□□□□ -1.21
TDP1-210ENST00000554976 HCFC1P51610 2035 aa7.51□□□□□ -1.21
TDP1-210ENST00000554976 FAM221AA4D161 298 aa7.51□□□□□ -1.21
TDP1-210ENST00000554976 KRBOX1C9JBD0 128 aa7.51□□□□□ -1.21
TDP1-210ENST00000554976 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.51□□□□□ -1.21
TDP1-210ENST00000554976 GOSR2O14653 212 aa7.51□□□□□ -1.21
TDP1-210ENST00000554976 CDIPTO14735 213 aa7.51□□□□□ -1.21
TDP1-210ENST00000554976 OR7C1O76099 320 aaPredicted RBP7.51□□□□□ -1.21
TDP1-210ENST00000554976 RGS11O94810 467 aa7.51□□□□□ -1.21
TDP1-210ENST00000554976 SFT2D2O95562 160 aa7.51□□□□□ -1.21
TDP1-210ENST00000554976 CD40P25942 277 aa7.51□□□□□ -1.21
TDP1-210ENST00000554976 CFHR2P36980 270 aa7.51□□□□□ -1.21
TDP1-210ENST00000554976 ECI1P42126 302 aa7.51□□□□□ -1.21
TDP1-210ENST00000554976 UCP3P55916 312 aa7.51□□□□□ -1.21
TDP1-210ENST00000554976 TAS2R31P59538 309 aa7.51□□□□□ -1.21
TDP1-210ENST00000554976 HOXA4Q00056 320 aaPredicted RBP7.51□□□□□ -1.21
TDP1-210ENST00000554976 FBXL19-AS1Q494R0 122 aa7.51□□□□□ -1.21
TDP1-210ENST00000554976 CHRFAM7AQ494W8 412 aa7.51□□□□□ -1.21
TDP1-210ENST00000554976 TMEM128Q5BJH2 165 aa7.51□□□□□ -1.21
TDP1-210ENST00000554976 UNQ6494/PRO21346Q6UXR6 183 aa7.51□□□□□ -1.21
TDP1-210ENST00000554976 ZNF497Q6ZNH5 498 aa7.51□□□□□ -1.21
TDP1-210ENST00000554976 TMED4Q7Z7H5 227 aa7.51□□□□□ -1.21
TDP1-210ENST00000554976 PLPPR1Q8TBJ4 325 aa7.51□□□□□ -1.21
TDP1-210ENST00000554976 MOB3AQ96BX8 217 aa7.51□□□□□ -1.21
TDP1-210ENST00000554976 RSRP1Q9BUV0 290 aa7.51□□□□□ -1.21
TDP1-210ENST00000554976 TUSC2O75896 110 aa7.51□□□□□ -1.21
TDP1-210ENST00000554976 SIX6O95475 246 aa7.51□□□□□ -1.21
TDP1-210ENST00000554976 OR2H2O95918 312 aa7.51□□□□□ -1.21
TDP1-210ENST00000554976 LHBP01229 141 aa7.51□□□□□ -1.21
TDP1-210ENST00000554976 HLA-AP01891 365 aaKnown RBP7.51□□□□□ -1.21
TDP1-210ENST00000554976 CTSDP07339 412 aaPredicted RBP7.51□□□□□ -1.21
TDP1-210ENST00000554976 RAP2BP61225 183 aa7.51□□□□□ -1.21
TDP1-210ENST00000554976 RGS7BPQ6MZT1 257 aaPredicted RBP7.51□□□□□ -1.21
TDP1-210ENST00000554976 ACP7Q6ZNF0 438 aa7.51□□□□□ -1.21
TDP1-210ENST00000554976 DMRTC2Q8IXT2 367 aaPredicted RBP7.51□□□□□ -1.21
TDP1-210ENST00000554976 ZNF2Q9BSG1 426 aaPredicted RBP7.51□□□□□ -1.21
TDP1-210ENST00000554976 SMG1Q96Q15 3661 aaKnown RBP7.5□□□□□ -1.21
TDP1-210ENST00000554976 hCG_1807616A0A1W2PRN6 198 aa7.5□□□□□ -1.21
TDP1-210ENST00000554976 CRYM-AS1A6NIL9 109 aa7.5□□□□□ -1.21
TDP1-210ENST00000554976 NPIPB11E5RHQ5 1161 aa7.5□□□□□ -1.21
TDP1-210ENST00000554976 NUPL2O15504 423 aaKnown RBP7.5□□□□□ -1.21
TDP1-210ENST00000554976 IFNA6P05013 189 aa7.5□□□□□ -1.21
TDP1-210ENST00000554976 OR5H8P0DN80 308 aa7.5□□□□□ -1.21
TDP1-210ENST00000554976 GLRA1P23415 457 aa7.5□□□□□ -1.21
TDP1-210ENST00000554976 GATA4P43694 442 aa7.5□□□□□ -1.21
TDP1-210ENST00000554976 ID4P47928 161 aa7.5□□□□□ -1.21
TDP1-210ENST00000554976 ANKRD55Q3KP44 614 aa7.5□□□□□ -1.21
TDP1-210ENST00000554976 PRAMEF6Q5VXH4 476 aa7.5□□□□□ -1.21
TDP1-210ENST00000554976 ALKBH2Q6NS38 261 aa7.5□□□□□ -1.21
TDP1-210ENST00000554976 CLEC18BQ6UXF7 455 aa7.5□□□□□ -1.21
TDP1-210ENST00000554976 LINC00052Q96N35 136 aa7.5□□□□□ -1.21
TDP1-210ENST00000554976 ZNF286AQ9HBT8 521 aa7.5□□□□□ -1.21
TDP1-210ENST00000554976 MSL2Q9HCI7 577 aa7.5□□□□□ -1.21
TDP1-210ENST00000554976 MBNL3Q9NUK0 354 aaKnown RBP7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms