RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 CD79AP11912 226 aa14.82□□□□□ -0.04
SHOX-204ENST00000554971 ZNF83P51522 516 aa14.82□□□□□ -0.04
SHOX-204ENST00000554971 LUMP51884 338 aaPredicted RBP14.82□□□□□ -0.04
SHOX-204ENST00000554971 RAB1AP62820 205 aa14.82□□□□□ -0.04
SHOX-204ENST00000554971 RSU1Q15404 277 aa14.82□□□□□ -0.04
SHOX-204ENST00000554971 LRRC37A5PQ49AS3 106 aa14.82□□□□□ -0.04
SHOX-204ENST00000554971 PRSS54Q6PEW0 395 aa14.82□□□□□ -0.04
SHOX-204ENST00000554971 RTN4RL2Q86UN3 420 aa14.82□□□□□ -0.04
SHOX-204ENST00000554971 PIGTQ969N2 578 aa14.82□□□□□ -0.04
SHOX-204ENST00000554971 C2orf50Q96LR7 162 aa14.82□□□□□ -0.04
SHOX-204ENST00000554971 HS3ST6Q96QI5 342 aa14.82□□□□□ -0.04
SHOX-204ENST00000554971 OR2H1Q9GZK4 316 aa14.82□□□□□ -0.04
SHOX-204ENST00000554971 ELL3Q9HB65 397 aaPredicted RBP14.82□□□□□ -0.04
SHOX-204ENST00000554971 DPRXA6NFQ7 191 aa14.82□□□□□ -0.04
SHOX-204ENST00000554971 NUDT19A8MXV4 375 aa14.82□□□□□ -0.04
SHOX-204ENST00000554971 F5H0A9 414 aaPredicted RBP14.82□□□□□ -0.04
SHOX-204ENST00000554971 XRCC2O43543 280 aa14.82□□□□□ -0.04
SHOX-204ENST00000554971 IGLV1-44P01699 117 aa14.82□□□□□ -0.04
SHOX-204ENST00000554971 LCATP04180 440 aa14.82□□□□□ -0.04
SHOX-204ENST00000554971 ZNF32P17041 273 aa14.82□□□□□ -0.04
SHOX-204ENST00000554971 FUT6P51993 359 aa14.82□□□□□ -0.04
SHOX-204ENST00000554971 SUPT4H1P63272 117 aaKnown RBP14.82□□□□□ -0.04
SHOX-204ENST00000554971 DAZAP2Q15038 168 aaPredicted RBP14.82□□□□□ -0.04
SHOX-204ENST00000554971 ZNF774Q6NX45 483 aa14.82□□□□□ -0.04
SHOX-204ENST00000554971 UQCC3Q6UW78 93 aa14.82□□□□□ -0.04
SHOX-204ENST00000554971 NPRL2Q8WTW4 380 aa14.82□□□□□ -0.04
SHOX-204ENST00000554971 PIK3IP1Q96FE7 263 aa14.82□□□□□ -0.04
SHOX-204ENST00000554971 LINC00052Q96N35 136 aa14.82□□□□□ -0.04
SHOX-204ENST00000554971 RNF126Q9BV68 326 aa14.82□□□□□ -0.04
SHOX-204ENST00000554971 IGHV1-18A0A0C4DH31 117 aa14.81□□□□□ -0.04
SHOX-204ENST00000554971 A6NNC1 897 aa14.81□□□□□ -0.04
SHOX-204ENST00000554971 POM121CA8CG34 1229 aa14.81□□□□□ -0.04
SHOX-204ENST00000554971 CTSDP07339 412 aaPredicted RBP14.81□□□□□ -0.04
SHOX-204ENST00000554971 TPT1P13693 172 aaKnown RBP14.81□□□□□ -0.04
SHOX-204ENST00000554971 ZNF14P17017 642 aaPredicted RBP14.81□□□□□ -0.04
SHOX-204ENST00000554971 EIF5AP63241 154 aaKnown RBP14.81□□□□□ -0.04
SHOX-204ENST00000554971 PSG4Q00888 419 aa14.81□□□□□ -0.04
SHOX-204ENST00000554971 TAGLNQ01995 201 aaKnown RBP14.81□□□□□ -0.04
SHOX-204ENST00000554971 BSPH1Q075Z2 132 aa14.81□□□□□ -0.04
SHOX-204ENST00000554971 TUSC1Q2TAM9 212 aa14.81□□□□□ -0.04
SHOX-204ENST00000554971 ZSCAN4Q8NAM6 433 aaPredicted RBP14.81□□□□□ -0.04
SHOX-204ENST00000554971 BORCS8Q96FH0 119 aa14.81□□□□□ -0.04
SHOX-204ENST00000554971 WDR13Q9H1Z4 485 aa14.81□□□□□ -0.04
SHOX-204ENST00000554971 GPR173Q9NS66 373 aa14.81□□□□□ -0.04
SHOX-204ENST00000554971 SLC7A11Q9UPY5 501 aa14.81□□□□□ -0.04
SHOX-204ENST00000554971 RAI1Q7Z5J4 1906 aaPredicted RBP14.81□□□□□ -0.04
SHOX-204ENST00000554971 NRASP01111 189 aa14.8□□□□□ -0.04
SHOX-204ENST00000554971 RPS2P15880 293 aaKnown RBP14.8□□□□□ -0.04
SHOX-204ENST00000554971 CBR1P16152 277 aa14.8□□□□□ -0.04
SHOX-204ENST00000554971 ACKR3P25106 362 aa14.8□□□□□ -0.04
SHOX-204ENST00000554971 HTR5AP47898 357 aa14.8□□□□□ -0.04
SHOX-204ENST00000554971 IDH3GP51553 393 aaPredicted RBP14.8□□□□□ -0.04
SHOX-204ENST00000554971 FAM169BQ8N8A8 192 aa14.8□□□□□ -0.04
SHOX-204ENST00000554971 CPEB3Q8NE35 698 aaKnown RBP14.8□□□□□ -0.04
SHOX-204ENST00000554971 SLC30A7Q8NEW0 376 aa14.8□□□□□ -0.04
SHOX-204ENST00000554971 DCUN1D4Q92564 292 aa14.8□□□□□ -0.04
SHOX-204ENST00000554971 SPSB4Q96A44 273 aa14.8□□□□□ -0.04
SHOX-204ENST00000554971 PLPPR2Q96GM1 343 aa14.8□□□□□ -0.04
SHOX-204ENST00000554971 BARX1Q9HBU1 254 aaPredicted RBP14.8□□□□□ -0.04
SHOX-204ENST00000554971 C1orf123Q9NWV4 160 aa14.8□□□□□ -0.04
SHOX-204ENST00000554971 ANXA10Q9UJ72 324 aa14.8□□□□□ -0.04
SHOX-204ENST00000554971 RAB19A4D1S5 217 aa14.8□□□□□ -0.04
SHOX-204ENST00000554971 TEX46H3BTG2 121 aa14.8□□□□□ -0.04
SHOX-204ENST00000554971 TPD52L2O43399 206 aaKnown RBP14.8□□□□□ -0.04
SHOX-204ENST00000554971 IFNA2P01563 188 aa14.8□□□□□ -0.04
SHOX-204ENST00000554971 CECR9P0C854 216 aa14.8□□□□□ -0.04
SHOX-204ENST00000554971 IL15RAQ13261 267 aa14.8□□□□□ -0.04
SHOX-204ENST00000554971 OR8B8Q15620 311 aa14.8□□□□□ -0.04
SHOX-204ENST00000554971 DHRS11Q6UWP2 260 aa14.8□□□□□ -0.04
SHOX-204ENST00000554971 SSX8Q7RTT4 187 aa14.8□□□□□ -0.04
SHOX-204ENST00000554971 AQP10Q96PS8 301 aa14.8□□□□□ -0.04
SHOX-204ENST00000554971 WNT5BQ9H1J7 359 aa14.8□□□□□ -0.04
SHOX-204ENST00000554971 hCG_38984A0A1B0GV85 526 aa14.79□□□□□ -0.04
SHOX-204ENST00000554971 M0R1B8 84 aa14.79□□□□□ -0.04
SHOX-204ENST00000554971 TAAR5O14804 337 aa14.79□□□□□ -0.04
SHOX-204ENST00000554971 HTR3BO95264 441 aa14.79□□□□□ -0.04
SHOX-204ENST00000554971 CD40P25942 277 aa14.79□□□□□ -0.04
SHOX-204ENST00000554971 SLC9A3R2Q15599 337 aa14.79□□□□□ -0.04
SHOX-204ENST00000554971 BEX5Q5H9J7 111 aa14.79□□□□□ -0.04
SHOX-204ENST00000554971 PABPC1L2AQ5JQF8 200 aa14.79□□□□□ -0.04
SHOX-204ENST00000554971 NCMAPQ5T1S8 102 aa14.79□□□□□ -0.04
SHOX-204ENST00000554971 BAP18Q8IXM2 172 aa14.79□□□□□ -0.04
SHOX-204ENST00000554971 NANOS1Q8WY41 292 aaKnown RBP14.79□□□□□ -0.04
SHOX-204ENST00000554971 METTL8Q9H825 291 aaKnown RBP14.79□□□□□ -0.04
SHOX-204ENST00000554971 NECAP2Q9NVZ3 263 aa14.79□□□□□ -0.04
SHOX-204ENST00000554971 DSCAMO60469 2012 aa14.79□□□□□ -0.04
SHOX-204ENST00000554971 ZNF469Q96JG9 3925 aaPredicted RBP14.79□□□□□ -0.04
SHOX-204ENST00000554971 CELSR1Q9NYQ6 3014 aa14.78□□□□□ -0.04
SHOX-204ENST00000554971 ZNF816-ZNF321PA0A0X1KG74 233 aa14.78□□□□□ -0.04
SHOX-204ENST00000554971 FGF16O43320 207 aa14.78□□□□□ -0.04
SHOX-204ENST00000554971 PLAUP00749 431 aa14.78□□□□□ -0.04
SHOX-204ENST00000554971 PGAM2P15259 253 aa14.78□□□□□ -0.04
SHOX-204ENST00000554971 GLRA1P23415 457 aa14.78□□□□□ -0.04
SHOX-204ENST00000554971 ARR3P36575 388 aa14.78□□□□□ -0.04
SHOX-204ENST00000554971 RBMXP38159 391 aaKnown RBP14.78□□□□□ -0.04
SHOX-204ENST00000554971 ATXN7L3Q14CW9 347 aaPredicted RBP14.78□□□□□ -0.04
SHOX-204ENST00000554971 ANKRD55Q3KP44 614 aa14.78□□□□□ -0.04
SHOX-204ENST00000554971 C6orf201Q7Z4U5 140 aa14.78□□□□□ -0.04
SHOX-204ENST00000554971 SGPP2Q8IWX5 399 aa14.78□□□□□ -0.04
SHOX-204ENST00000554971 POC1AQ8NBT0 407 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms