RNA–Protein interactions for RNA: ENST00000554673.5

ATXN3-230, Transcript of ataxin 3, humanhuman

TSL 5

Gene ATXN3, Length 981 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-230ENST00000554673 TMEM200AQ86VY9 491 aa4.88□□□□□ -1.63
ATXN3-230ENST00000554673 CROCCP3Q8IVE0 287 aa4.88□□□□□ -1.63
ATXN3-230ENST00000554673 CCDC36Q8IYA8 594 aa4.88□□□□□ -1.63
ATXN3-230ENST00000554673 ZDHHC23Q8IYP9 409 aa4.88□□□□□ -1.63
ATXN3-230ENST00000554673 OR51T1Q8NGJ9 327 aa4.88□□□□□ -1.63
ATXN3-230ENST00000554673 ITLN1Q8WWA0 313 aa4.88□□□□□ -1.63
ATXN3-230ENST00000554673 EMG1Q92979 244 aaKnown RBP4.88□□□□□ -1.63
ATXN3-230ENST00000554673 RNASE6Q93091 150 aaKnown RBP4.88□□□□□ -1.63
ATXN3-230ENST00000554673 MRPL24Q96A35 216 aaKnown RBP4.88□□□□□ -1.63
ATXN3-230ENST00000554673 TMEM230Q96A57 120 aa4.88□□□□□ -1.63
ATXN3-230ENST00000554673 SPSB1Q96BD6 273 aa4.88□□□□□ -1.63
ATXN3-230ENST00000554673 C10orf35Q96D05 121 aa4.88□□□□□ -1.63
ATXN3-230ENST00000554673 COQ2Q96H96 371 aa4.88□□□□□ -1.63
ATXN3-230ENST00000554673 AJUBAQ96IF1 538 aa4.88□□□□□ -1.63
ATXN3-230ENST00000554673 SORCS2Q96PQ0 1159 aa4.88□□□□□ -1.63
ATXN3-230ENST00000554673 FAAP24Q9BTP7 215 aa4.88□□□□□ -1.63
ATXN3-230ENST00000554673 ATG5Q9H1Y0 275 aa4.88□□□□□ -1.63
ATXN3-230ENST00000554673 FAIMQ9NVQ4 179 aa4.88□□□□□ -1.63
ATXN3-230ENST00000554673 ELOVL5Q9NYP7 299 aa4.88□□□□□ -1.63
ATXN3-230ENST00000554673 KCNN3Q9UGI6 736 aa4.88□□□□□ -1.63
ATXN3-230ENST00000554673 AK3Q9UIJ7 227 aa4.88□□□□□ -1.63
ATXN3-230ENST00000554673 RAB22AQ9UL26 194 aa4.88□□□□□ -1.63
ATXN3-230ENST00000554673 ING4Q9UNL4 249 aa4.88□□□□□ -1.63
ATXN3-230ENST00000554673 MRPS7Q9Y2R9 242 aaKnown RBP4.88□□□□□ -1.63
ATXN3-230ENST00000554673 MED13LQ71F56 2210 aa4.88□□□□□ -1.63
ATXN3-230ENST00000554673 IGHV3OR15-7A0A075B7D8 119 aa4.87□□□□□ -1.63
ATXN3-230ENST00000554673 MEX3AA1L020 520 aaKnown RBP4.87□□□□□ -1.63
ATXN3-230ENST00000554673 FUOMA2VDF0 154 aa4.87□□□□□ -1.63
ATXN3-230ENST00000554673 A8MZ25 164 aa4.87□□□□□ -1.63
ATXN3-230ENST00000554673 TEX22C9J3V5 150 aa4.87□□□□□ -1.63
ATXN3-230ENST00000554673 LYNX1G3V0Z9 82 aa4.87□□□□□ -1.63
ATXN3-230ENST00000554673 CDIPTO14735 213 aa4.87□□□□□ -1.63
ATXN3-230ENST00000554673 LYRM1O43325 122 aa4.87□□□□□ -1.63
ATXN3-230ENST00000554673 NOS1APO75052 506 aaPredicted RBP4.87□□□□□ -1.63
ATXN3-230ENST00000554673 NDUFS7O75251 213 aa4.87□□□□□ -1.63
ATXN3-230ENST00000554673 ZNF737O75373 536 aa4.87□□□□□ -1.63
ATXN3-230ENST00000554673 CLDN1O95832 211 aa4.87□□□□□ -1.63
ATXN3-230ENST00000554673 NAPSAO96009 420 aa4.87□□□□□ -1.63
ATXN3-230ENST00000554673 APOC1P02654 83 aa4.87□□□□□ -1.63
ATXN3-230ENST00000554673 CD3DP04234 171 aa4.87□□□□□ -1.63
ATXN3-230ENST00000554673 TMEM225BP0DP42 221 aa4.87□□□□□ -1.63
ATXN3-230ENST00000554673 LYNX1P0DP58 116 aa4.87□□□□□ -1.63
ATXN3-230ENST00000554673 RPS2P15880 293 aaKnown RBP4.87□□□□□ -1.63
ATXN3-230ENST00000554673 CHRNB4P30926 498 aa4.87□□□□□ -1.63
ATXN3-230ENST00000554673 CD200P41217 278 aa4.87□□□□□ -1.63
ATXN3-230ENST00000554673 GUCA1AP43080 201 aaPredicted RBP4.87□□□□□ -1.63
ATXN3-230ENST00000554673 NR4A2P43354 598 aa4.87□□□□□ -1.63
ATXN3-230ENST00000554673 HAAOP46952 286 aa4.87□□□□□ -1.63
ATXN3-230ENST00000554673 FUT6P51993 359 aa4.87□□□□□ -1.63
ATXN3-230ENST00000554673 FGF12P61328 243 aa4.87□□□□□ -1.63
ATXN3-230ENST00000554673 MICBQ29980 383 aa4.87□□□□□ -1.63
ATXN3-230ENST00000554673 NHLRC3Q5JS37 347 aa4.87□□□□□ -1.63
ATXN3-230ENST00000554673 SPANXN2Q5MJ10 180 aa4.87□□□□□ -1.63
ATXN3-230ENST00000554673 TMEM69Q5SWH9 247 aa4.87□□□□□ -1.63
ATXN3-230ENST00000554673 FAM90A2PQ658T7 463 aa4.87□□□□□ -1.63
ATXN3-230ENST00000554673 HIST2H2BCQ6DN03 193 aa4.87□□□□□ -1.63
ATXN3-230ENST00000554673 ZNF880Q6PDB4 577 aa4.87□□□□□ -1.63
ATXN3-230ENST00000554673 C11orf88Q6PI97 169 aa4.87□□□□□ -1.63
ATXN3-230ENST00000554673 BAIAP2L2Q6UXY1 529 aa4.87□□□□□ -1.63
ATXN3-230ENST00000554673 C17orf107Q6ZR85 190 aa4.87□□□□□ -1.63
ATXN3-230ENST00000554673 GAPTQ8N292 157 aa4.87□□□□□ -1.63
ATXN3-230ENST00000554673 POC5Q8NA72 575 aa4.87□□□□□ -1.63
ATXN3-230ENST00000554673 DUSP18Q8NEJ0 188 aa4.87□□□□□ -1.63
ATXN3-230ENST00000554673 NUP37Q8NFH4 326 aa4.87□□□□□ -1.63
ATXN3-230ENST00000554673 STEAP2Q8NFT2 490 aa4.87□□□□□ -1.63
ATXN3-230ENST00000554673 OR5A2Q8NGI9 324 aa4.87□□□□□ -1.63
ATXN3-230ENST00000554673 OR13G1Q8NGZ3 307 aa4.87□□□□□ -1.63
ATXN3-230ENST00000554673 OR51F2Q8NH61 342 aa4.87□□□□□ -1.63
ATXN3-230ENST00000554673 OR56B4Q8NH76 319 aa4.87□□□□□ -1.63
ATXN3-230ENST00000554673 MRPL30Q8TCC3 161 aaKnown RBP4.87□□□□□ -1.63
ATXN3-230ENST00000554673 RAB40AQ8WXH6 277 aa4.87□□□□□ -1.63
ATXN3-230ENST00000554673 AP3S1Q92572 193 aa4.87□□□□□ -1.63
ATXN3-230ENST00000554673 ADAT1Q9BUB4 502 aaKnown RBP4.87□□□□□ -1.63
ATXN3-230ENST00000554673 TMEM59Q9BXS4 323 aa4.87□□□□□ -1.63
ATXN3-230ENST00000554673 SHARPINQ9H0F6 387 aa4.87□□□□□ -1.63
ATXN3-230ENST00000554673 ELL3Q9HB65 397 aaPredicted RBP4.87□□□□□ -1.63
ATXN3-230ENST00000554673 CA10Q9NS85 328 aa4.87□□□□□ -1.63
ATXN3-230ENST00000554673 UFSP2Q9NUQ7 469 aa4.87□□□□□ -1.63
ATXN3-230ENST00000554673 TREM2Q9NZC2 230 aa4.87□□□□□ -1.63
ATXN3-230ENST00000554673 NLKQ9UBE8 527 aa4.87□□□□□ -1.63
ATXN3-230ENST00000554673 ZNF391Q9UJN7 358 aa4.87□□□□□ -1.63
ATXN3-230ENST00000554673 VSIG4Q9Y279 399 aa4.87□□□□□ -1.63
ATXN3-230ENST00000554673 CRYBG3Q68DQ2 2970 aa4.87□□□□□ -1.63
ATXN3-230ENST00000554673 DOPEY2Q9Y3R5 2298 aa4.86□□□□□ -1.63
ATXN3-230ENST00000554673 UBE2QL1A1L167 161 aa4.86□□□□□ -1.63
ATXN3-230ENST00000554673 C7orf66A4D0T2 115 aa4.86□□□□□ -1.63
ATXN3-230ENST00000554673 LRP5LA4QPB2 252 aa4.86□□□□□ -1.63
ATXN3-230ENST00000554673 BOLA2-SMG1P6H3BVE0 249 aa4.86□□□□□ -1.63
ATXN3-230ENST00000554673 J3QT63 122 aa4.86□□□□□ -1.63
ATXN3-230ENST00000554673 SLC33A1O00400 549 aaPredicted RBP4.86□□□□□ -1.63
ATXN3-230ENST00000554673 HOXA3O43365 443 aaPredicted RBP4.86□□□□□ -1.63
ATXN3-230ENST00000554673 MTRF1O75570 445 aaKnown RBP4.86□□□□□ -1.63
ATXN3-230ENST00000554673 RP2O75695 350 aa4.86□□□□□ -1.63
ATXN3-230ENST00000554673 SOD3P08294 240 aa4.86□□□□□ -1.63
ATXN3-230ENST00000554673 ADH4P08319 380 aa4.86□□□□□ -1.63
ATXN3-230ENST00000554673 OR4A8P0C604 315 aa4.86□□□□□ -1.63
ATXN3-230ENST00000554673 DANCRP0C864 163 aa4.86□□□□□ -1.63
ATXN3-230ENST00000554673 CGB3P0DN86 165 aa4.86□□□□□ -1.63
ATXN3-230ENST00000554673 CGB7P0DN87 165 aa4.86□□□□□ -1.63
ATXN3-230ENST00000554673 PRKACBP22694 351 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms