RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 AIREO43918 545 aa13.59□□□□□ -0.23
NEK9-204ENST00000554258 CALRP27797 417 aaKnown RBP13.59□□□□□ -0.23
NEK9-204ENST00000554258 HAAOP46952 286 aa13.59□□□□□ -0.23
NEK9-204ENST00000554258 ZP1P60852 638 aa13.59□□□□□ -0.23
NEK9-204ENST00000554258 CD83Q01151 205 aa13.59□□□□□ -0.23
NEK9-204ENST00000554258 PDZK1IP1Q13113 114 aa13.59□□□□□ -0.23
NEK9-204ENST00000554258 LRRC75BQ2VPJ9 315 aa13.59□□□□□ -0.23
NEK9-204ENST00000554258 HAGHLQ6PII5 290 aaPredicted RBP13.59□□□□□ -0.23
NEK9-204ENST00000554258 SLC16A12Q6ZSM3 486 aa13.59□□□□□ -0.23
NEK9-204ENST00000554258 ZNF826PQ6ZT77 177 aa13.59□□□□□ -0.23
NEK9-204ENST00000554258 CMTM4Q8IZR5 234 aa13.59□□□□□ -0.23
NEK9-204ENST00000554258 Q8N2B8 174 aa13.59□□□□□ -0.23
NEK9-204ENST00000554258 NKAIN3Q8N8D7 197 aa13.59□□□□□ -0.23
NEK9-204ENST00000554258 OR11L1Q8NGX0 322 aa13.59□□□□□ -0.23
NEK9-204ENST00000554258 SPACA5Q96QH8 159 aa13.59□□□□□ -0.23
NEK9-204ENST00000554258 GFI1Q99684 422 aa13.59□□□□□ -0.23
NEK9-204ENST00000554258 CENPOQ9BU64 300 aa13.59□□□□□ -0.23
NEK9-204ENST00000554258 WNT10AQ9GZT5 417 aa13.59□□□□□ -0.23
NEK9-204ENST00000554258 EXOSC4Q9NPD3 245 aaKnown RBP13.59□□□□□ -0.23
NEK9-204ENST00000554258 C1orf123Q9NWV4 160 aa13.59□□□□□ -0.23
NEK9-204ENST00000554258 RNF7Q9UBF6 113 aa13.59□□□□□ -0.23
NEK9-204ENST00000554258 MAGEB3O15480 346 aa13.58□□□□□ -0.24
NEK9-204ENST00000554258 GABARAPO95166 117 aa13.58□□□□□ -0.24
NEK9-204ENST00000554258 MAS1P04201 325 aa13.58□□□□□ -0.24
NEK9-204ENST00000554258 HCKP08631 526 aa13.58□□□□□ -0.24
NEK9-204ENST00000554258 MTNR1BP49286 362 aa13.58□□□□□ -0.24
NEK9-204ENST00000554258 DLX1P56177 255 aa13.58□□□□□ -0.24
NEK9-204ENST00000554258 ERVK11-1P61568 191 aa13.58□□□□□ -0.24
NEK9-204ENST00000554258 BLMHQ13867 455 aa13.58□□□□□ -0.24
NEK9-204ENST00000554258 C1orf100Q5SVJ3 147 aa13.58□□□□□ -0.24
NEK9-204ENST00000554258 DDI2Q5TDH0 399 aa13.58□□□□□ -0.24
NEK9-204ENST00000554258 TPRA1Q86W33 373 aa13.58□□□□□ -0.24
NEK9-204ENST00000554258 SAXO1Q8IYX7 474 aa13.58□□□□□ -0.24
NEK9-204ENST00000554258 GCSAMQ8N6F7 178 aa13.58□□□□□ -0.24
NEK9-204ENST00000554258 LINC00482Q8N8I6 264 aa13.58□□□□□ -0.24
NEK9-204ENST00000554258 PXT1Q8NFP0 134 aa13.58□□□□□ -0.24
NEK9-204ENST00000554258 ZNF671Q8TAW3 534 aa13.58□□□□□ -0.24
NEK9-204ENST00000554258 FOXRED1Q96CU9 486 aaPredicted RBP13.58□□□□□ -0.24
NEK9-204ENST00000554258 CPNE2Q96FN4 548 aaPredicted RBP13.58□□□□□ -0.24
NEK9-204ENST00000554258 KCTD7Q96MP8 289 aa13.58□□□□□ -0.24
NEK9-204ENST00000554258 UQCC2Q9BRT2 126 aa13.58□□□□□ -0.24
NEK9-204ENST00000554258 A6NLC8 198 aa13.57□□□□□ -0.24
NEK9-204ENST00000554258 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.57□□□□□ -0.24
NEK9-204ENST00000554258 SYNGR1O43759 233 aa13.57□□□□□ -0.24
NEK9-204ENST00000554258 RHBDL1O75783 438 aa13.57□□□□□ -0.24
NEK9-204ENST00000554258 OCMP0CE72 109 aaPredicted RBP13.57□□□□□ -0.24
NEK9-204ENST00000554258 PGA5P0DJD9 388 aa13.57□□□□□ -0.24
NEK9-204ENST00000554258 ZNF93P35789 620 aaPredicted RBP13.57□□□□□ -0.24
NEK9-204ENST00000554258 PSMD7P51665 324 aa13.57□□□□□ -0.24
NEK9-204ENST00000554258 CTF1Q16619 201 aa13.57□□□□□ -0.24
NEK9-204ENST00000554258 C11orf91Q3C1V1 193 aa13.57□□□□□ -0.24
NEK9-204ENST00000554258 ARSJQ5FYB0 599 aaPredicted RBP13.57□□□□□ -0.24
NEK9-204ENST00000554258 SFRP4Q6FHJ7 346 aaPredicted RBP13.57□□□□□ -0.24
NEK9-204ENST00000554258 LIAT1Q6ZQX7 453 aa13.57□□□□□ -0.24
NEK9-204ENST00000554258 POC1AQ8NBT0 407 aa13.57□□□□□ -0.24
NEK9-204ENST00000554258 ST8SIA4Q92187 359 aa13.57□□□□□ -0.24
NEK9-204ENST00000554258 NAA50Q9GZZ1 169 aaKnown RBP13.57□□□□□ -0.24
NEK9-204ENST00000554258 RNF167Q9H6Y7 350 aa13.57□□□□□ -0.24
NEK9-204ENST00000554258 MTCH1Q9NZJ7 389 aa13.57□□□□□ -0.24
NEK9-204ENST00000554258 POLDIP2Q9Y2S7 368 aa13.57□□□□□ -0.24
NEK9-204ENST00000554258 IGKV1-12A0A0C4DH73 117 aa13.56□□□□□ -0.24
NEK9-204ENST00000554258 LOC100506127A0A0U1RQW1 187 aa13.56□□□□□ -0.24
NEK9-204ENST00000554258 DVL1O14640 695 aa13.56□□□□□ -0.24
NEK9-204ENST00000554258 IGKV1D-12P01611 117 aa13.56□□□□□ -0.24
NEK9-204ENST00000554258 PTGFRP43088 359 aa13.56□□□□□ -0.24
NEK9-204ENST00000554258 BMXP51813 675 aa13.56□□□□□ -0.24
NEK9-204ENST00000554258 HOXA4Q00056 320 aaPredicted RBP13.56□□□□□ -0.24
NEK9-204ENST00000554258 GPR107Q5VW38 600 aa13.56□□□□□ -0.24
NEK9-204ENST00000554258 GLT8D1Q68CQ7 371 aa13.56□□□□□ -0.24
NEK9-204ENST00000554258 SATL1Q86VE3 508 aa13.56□□□□□ -0.24
NEK9-204ENST00000554258 MKXQ8IYA7 352 aa13.56□□□□□ -0.24
NEK9-204ENST00000554258 BOLLQ8N9W6 283 aaKnown RBP13.56□□□□□ -0.24
NEK9-204ENST00000554258 OR5AU1Q8NGC0 362 aa13.56□□□□□ -0.24
NEK9-204ENST00000554258 LRRC29Q8WV35 223 aa13.56□□□□□ -0.24
NEK9-204ENST00000554258 BCL7BQ9BQE9 202 aa13.56□□□□□ -0.24
NEK9-204ENST00000554258 NRIP2Q9BQI9 281 aa13.56□□□□□ -0.24
NEK9-204ENST00000554258 MCRIP2Q9BUT9 160 aaKnown RBP13.56□□□□□ -0.24
NEK9-204ENST00000554258 RHOFQ9HBH0 211 aa13.56□□□□□ -0.24
NEK9-204ENST00000554258 HES4Q9HCC6 221 aa13.56□□□□□ -0.24
NEK9-204ENST00000554258 RASL12Q9NYN1 266 aa13.56□□□□□ -0.24
NEK9-204ENST00000554258 AK6Q9Y3D8 172 aaKnown RBP13.56□□□□□ -0.24
NEK9-204ENST00000554258 KIAA1109Q2LD37 5005 aa13.56□□□□□ -0.24
NEK9-204ENST00000554258 ALMS1Q8TCU4 4167 aa13.55□□□□□ -0.24
NEK9-204ENST00000554258 TCRBV4S1A1TA0A5B7 111 aa13.55□□□□□ -0.24
NEK9-204ENST00000554258 LGALS8O00214 317 aa13.55□□□□□ -0.24
NEK9-204ENST00000554258 PDCD5O14737 125 aa13.55□□□□□ -0.24
NEK9-204ENST00000554258 KDM4BO94953 1096 aa13.55□□□□□ -0.24
NEK9-204ENST00000554258 MYL9P24844 172 aa13.55□□□□□ -0.24
NEK9-204ENST00000554258 CHATP28329 748 aa13.55□□□□□ -0.24
NEK9-204ENST00000554258 TMBIM6P55061 237 aa13.55□□□□□ -0.24
NEK9-204ENST00000554258 TEX36Q5VZQ5 186 aa13.55□□□□□ -0.24
NEK9-204ENST00000554258 SLC25A26Q70HW3 274 aa13.55□□□□□ -0.24
NEK9-204ENST00000554258 NR2C2APQ86WQ0 139 aa13.55□□□□□ -0.24
NEK9-204ENST00000554258 C17orf50Q8WW18 174 aa13.55□□□□□ -0.24
NEK9-204ENST00000554258 RFT1Q96AA3 541 aa13.55□□□□□ -0.24
NEK9-204ENST00000554258 IL36GQ9NZH8 169 aa13.55□□□□□ -0.24
NEK9-204ENST00000554258 TSSC4Q9Y5U2 329 aaPredicted RBP13.55□□□□□ -0.24
NEK9-204ENST00000554258 CEPT1Q9Y6K0 416 aa13.55□□□□□ -0.24
NEK9-204ENST00000554258 V9GY05 133 aa13.55□□□□□ -0.24
NEK9-204ENST00000554258 SLC17A2O00624 439 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms