RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 MED30Q96HR3 178 aa6.4□□□□□ -1.38
TDP1-209ENST00000554180 CCL19Q99731 98 aa6.4□□□□□ -1.38
TDP1-209ENST00000554180 C11orf54Q9H0W9 315 aaPredicted RBP6.4□□□□□ -1.38
TDP1-209ENST00000554180 PPA2Q9H2U2 334 aa6.4□□□□□ -1.38
TDP1-209ENST00000554180 NCOR1P1Q9H4R4 102 aa6.4□□□□□ -1.38
TDP1-209ENST00000554180 ZNF665Q9H7R5 613 aa6.4□□□□□ -1.38
TDP1-209ENST00000554180 CHODLQ9H9P2 273 aa6.4□□□□□ -1.38
TDP1-209ENST00000554180 ZNF286AQ9HBT8 521 aa6.4□□□□□ -1.38
TDP1-209ENST00000554180 TMEM165Q9HC07 324 aa6.4□□□□□ -1.38
TDP1-209ENST00000554180 DCAF16Q9NXF7 216 aa6.4□□□□□ -1.38
TDP1-209ENST00000554180 COPZ2Q9P299 210 aa6.4□□□□□ -1.38
TDP1-209ENST00000554180 KAAG1Q9UBP8 84 aa6.4□□□□□ -1.38
TDP1-209ENST00000554180 CACNG2Q9Y698 323 aa6.4□□□□□ -1.38
TDP1-209ENST00000554180 CENPEQ02224 2701 aa6.4□□□□□ -1.39
TDP1-209ENST00000554180 DCHS2Q6V1P9 2916 aa6.39□□□□□ -1.39
TDP1-209ENST00000554180 DOPEY2Q9Y3R5 2298 aa6.39□□□□□ -1.39
TDP1-209ENST00000554180 GCN1Q92616 2671 aaKnown RBP6.39□□□□□ -1.39
TDP1-209ENST00000554180 TANC2Q9HCD6 1990 aa6.39□□□□□ -1.39
TDP1-209ENST00000554180 CHD3Q12873 2000 aaKnown RBP6.39□□□□□ -1.39
TDP1-209ENST00000554180 IGHV3OR15-7A0A075B7D8 119 aa6.39□□□□□ -1.39
TDP1-209ENST00000554180 TMEM82A0PJX8 343 aa6.39□□□□□ -1.39
TDP1-209ENST00000554180 MEIS3P1A6NDR6 274 aa6.39□□□□□ -1.39
TDP1-209ENST00000554180 HSPB6O14558 160 aa6.39□□□□□ -1.39
TDP1-209ENST00000554180 DIRAS3O95661 229 aa6.39□□□□□ -1.39
TDP1-209ENST00000554180 RAB3DO95716 219 aa6.39□□□□□ -1.39
TDP1-209ENST00000554180 IGHV2-70P01814 119 aa6.39□□□□□ -1.39
TDP1-209ENST00000554180 CD3DP04234 171 aa6.39□□□□□ -1.39
TDP1-209ENST00000554180 PAX1P15863 534 aa6.39□□□□□ -1.39
TDP1-209ENST00000554180 AMY2BP19961 511 aa6.39□□□□□ -1.39
TDP1-209ENST00000554180 ERP29P30040 261 aaKnown RBP6.39□□□□□ -1.39
TDP1-209ENST00000554180 SLC6A1P30531 599 aa6.39□□□□□ -1.39
TDP1-209ENST00000554180 CDKN1AP38936 164 aa6.39□□□□□ -1.39
TDP1-209ENST00000554180 GABRA2P47869 451 aa6.39□□□□□ -1.39
TDP1-209ENST00000554180 CEBPDP49716 269 aaPredicted RBP6.39□□□□□ -1.39
TDP1-209ENST00000554180 HOXA4Q00056 320 aaPredicted RBP6.39□□□□□ -1.39
TDP1-209ENST00000554180 TRIM16LQ309B1 348 aa6.39□□□□□ -1.39
TDP1-209ENST00000554180 TMEM155Q4W5P6 130 aa6.39□□□□□ -1.39
TDP1-209ENST00000554180 RNASE10Q5GAN6 216 aaKnown RBP6.39□□□□□ -1.39
TDP1-209ENST00000554180 VAX1Q5SQQ9 334 aa6.39□□□□□ -1.39
TDP1-209ENST00000554180 FAM201AQ5SY85 155 aa6.39□□□□□ -1.39
TDP1-209ENST00000554180 RSBN1Q5VWQ0 802 aaPredicted RBP6.39□□□□□ -1.39
TDP1-209ENST00000554180 SLC35E4Q6ICL7 350 aa6.39□□□□□ -1.39
TDP1-209ENST00000554180 STEAP1BQ6NZ63 245 aa6.39□□□□□ -1.39
TDP1-209ENST00000554180 TRAT1Q6PIZ9 186 aa6.39□□□□□ -1.39
TDP1-209ENST00000554180 BRICD5Q6PL45 260 aa6.39□□□□□ -1.39
TDP1-209ENST00000554180 DCDC5Q6ZRR9 648 aa6.39□□□□□ -1.39
TDP1-209ENST00000554180 TGIF2LYQ8IUE0 185 aa6.39□□□□□ -1.39
TDP1-209ENST00000554180 ZNF295-AS1Q8N0V1 137 aa6.39□□□□□ -1.39
TDP1-209ENST00000554180 BPIFB2Q8N4F0 458 aa6.39□□□□□ -1.39
TDP1-209ENST00000554180 ARRDC1Q8N5I2 433 aa6.39□□□□□ -1.39
TDP1-209ENST00000554180 GVQW1Q8N7I0 195 aa6.39□□□□□ -1.39
TDP1-209ENST00000554180 OR5AP2Q8NGF4 316 aa6.39□□□□□ -1.39
TDP1-209ENST00000554180 OR5T2Q8NGG2 359 aa6.39□□□□□ -1.39
TDP1-209ENST00000554180 OR4C16Q8NGL9 310 aa6.39□□□□□ -1.39
TDP1-209ENST00000554180 PLPPR1Q8TBJ4 325 aa6.39□□□□□ -1.39
TDP1-209ENST00000554180 MRPL30Q8TCC3 161 aaKnown RBP6.39□□□□□ -1.39
TDP1-209ENST00000554180 DYRK2Q92630 601 aa6.39□□□□□ -1.39
TDP1-209ENST00000554180 RAB1CQ92928 201 aa6.39□□□□□ -1.39
TDP1-209ENST00000554180 GAFA1Q96PS6 74 aa6.39□□□□□ -1.39
TDP1-209ENST00000554180 HDHD3Q9BSH5 251 aaPredicted RBP6.39□□□□□ -1.39
TDP1-209ENST00000554180 ST6GALNAC5Q9BVH7 336 aa6.39□□□□□ -1.39
TDP1-209ENST00000554180 SHARPINQ9H0F6 387 aa6.39□□□□□ -1.39
TDP1-209ENST00000554180 BARX1Q9HBU1 254 aaPredicted RBP6.39□□□□□ -1.39
TDP1-209ENST00000554180 CHMP1AQ9HD42 196 aaPredicted RBP6.39□□□□□ -1.39
TDP1-209ENST00000554180 HRASLSQ9HDD0 168 aa6.39□□□□□ -1.39
TDP1-209ENST00000554180 Q9N2K0 584 aa6.39□□□□□ -1.39
TDP1-209ENST00000554180 MBNL3Q9NUK0 354 aaKnown RBP6.39□□□□□ -1.39
TDP1-209ENST00000554180 SLC2A8Q9NY64 477 aa6.39□□□□□ -1.39
TDP1-209ENST00000554180 ANXA10Q9UJ72 324 aa6.39□□□□□ -1.39
TDP1-209ENST00000554180 MAB21L2Q9Y586 359 aa6.39□□□□□ -1.39
TDP1-209ENST00000554180 ABCA12Q86UK0 2595 aa6.39□□□□□ -1.39
TDP1-209ENST00000554180 DISC1C4P0D8 188 aa6.38□□□□□ -1.39
TDP1-209ENST00000554180 TNFRSF13BO14836 293 aaPredicted RBP6.38□□□□□ -1.39
TDP1-209ENST00000554180 TMPRSS2O15393 492 aa6.38□□□□□ -1.39
TDP1-209ENST00000554180 GYPAP02724 150 aa6.38□□□□□ -1.39
TDP1-209ENST00000554180 MT-ND4P03905 459 aa6.38□□□□□ -1.39
TDP1-209ENST00000554180 TK1P04183 234 aa6.38□□□□□ -1.39
TDP1-209ENST00000554180 CTXN2P0C2S0 81 aa6.38□□□□□ -1.39
TDP1-209ENST00000554180 COL8A2P25067 703 aa6.38□□□□□ -1.39
TDP1-209ENST00000554180 HLA-DMAP28067 261 aa6.38□□□□□ -1.39
TDP1-209ENST00000554180 BTCP35070 178 aa6.38□□□□□ -1.39
TDP1-209ENST00000554180 HRH1P35367 487 aa6.38□□□□□ -1.39
TDP1-209ENST00000554180 RFX2P48378 723 aa6.38□□□□□ -1.39
TDP1-209ENST00000554180 P2RX3P56373 397 aa6.38□□□□□ -1.39
TDP1-209ENST00000554180 ARPC4P59998 168 aa6.38□□□□□ -1.39
TDP1-209ENST00000554180 ATXN7L3Q14CW9 347 aaPredicted RBP6.38□□□□□ -1.39
TDP1-209ENST00000554180 GRK1Q15835 563 aa6.38□□□□□ -1.39
TDP1-209ENST00000554180 CHRFAM7AQ494W8 412 aa6.38□□□□□ -1.39
TDP1-209ENST00000554180 C6orf183Q5T699 404 aa6.38□□□□□ -1.39
TDP1-209ENST00000554180 OR52W1Q6IF63 320 aa6.38□□□□□ -1.39
TDP1-209ENST00000554180 GDPD3Q7L5L3 318 aa6.38□□□□□ -1.39
TDP1-209ENST00000554180 OVCH2Q7RTZ1 564 aa6.38□□□□□ -1.39
TDP1-209ENST00000554180 NRARPQ7Z6K4 114 aa6.38□□□□□ -1.39
TDP1-209ENST00000554180 TMEM17Q86X19 198 aa6.38□□□□□ -1.39
TDP1-209ENST00000554180 SPICQ8N5J4 248 aa6.38□□□□□ -1.39
TDP1-209ENST00000554180 DUSP18Q8NEJ0 188 aa6.38□□□□□ -1.39
TDP1-209ENST00000554180 DEFB108BQ8NET1 73 aa6.38□□□□□ -1.39
TDP1-209ENST00000554180 TMEM185AQ8NFB2 350 aa6.38□□□□□ -1.39
TDP1-209ENST00000554180 OR4S1Q8NGB4 309 aa6.38□□□□□ -1.39
TDP1-209ENST00000554180 OR5H2Q8NGV7 314 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms