RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 RAB13P51153 203 aa5.31□□□□□ -1.56
SLIRP-203ENST00000554074 ARHGDIBP52566 201 aa5.31□□□□□ -1.56
SLIRP-203ENST00000554074 DYNC1I2Q13409 638 aaKnown RBP5.31□□□□□ -1.56
SLIRP-203ENST00000554074 IRF3Q14653 427 aa5.31□□□□□ -1.56
SLIRP-203ENST00000554074 TRAM1Q15629 374 aa5.31□□□□□ -1.56
SLIRP-203ENST00000554074 TBCEQ15813 527 aaPredicted RBP5.31□□□□□ -1.56
SLIRP-203ENST00000554074 TMEM219Q86XT9 240 aa5.31□□□□□ -1.56
SLIRP-203ENST00000554074 MS4A15Q8N5U1 240 aa5.31□□□□□ -1.56
SLIRP-203ENST00000554074 PARP16Q8N5Y8 322 aa5.31□□□□□ -1.56
SLIRP-203ENST00000554074 ZNF485Q8NCK3 441 aa5.31□□□□□ -1.56
SLIRP-203ENST00000554074 OR4F17Q8NGA8 305 aa5.31□□□□□ -1.56
SLIRP-203ENST00000554074 OR4P4Q8NGL7 312 aa5.31□□□□□ -1.56
SLIRP-203ENST00000554074 OR5AK2Q8NH90 309 aa5.31□□□□□ -1.56
SLIRP-203ENST00000554074 PHYHIPQ92561 330 aa5.31□□□□□ -1.56
SLIRP-203ENST00000554074 FGGYQ96C11 551 aa5.31□□□□□ -1.56
SLIRP-203ENST00000554074 SMIM19Q96E16 107 aa5.31□□□□□ -1.56
SLIRP-203ENST00000554074 AKR1E2Q96JD6 320 aa5.31□□□□□ -1.56
SLIRP-203ENST00000554074 OR4F4Q96R69 305 aa5.31□□□□□ -1.56
SLIRP-203ENST00000554074 NR1H4Q96RI1 486 aaPredicted RBP5.31□□□□□ -1.56
SLIRP-203ENST00000554074 NKX3-1Q99801 234 aaPredicted RBP5.31□□□□□ -1.56
SLIRP-203ENST00000554074 CHST6Q9GZX3 395 aa5.31□□□□□ -1.56
SLIRP-203ENST00000554074 NCOR1P1Q9H4R4 102 aa5.31□□□□□ -1.56
SLIRP-203ENST00000554074 ZCCHC4Q9H5U6 513 aa5.31□□□□□ -1.56
SLIRP-203ENST00000554074 LIN7BQ9HAP6 207 aa5.31□□□□□ -1.56
SLIRP-203ENST00000554074 EXOSC4Q9NPD3 245 aaKnown RBP5.31□□□□□ -1.56
SLIRP-203ENST00000554074 DPM3Q9P2X0 92 aa5.31□□□□□ -1.56
SLIRP-203ENST00000554074 IL36RNQ9UBH0 155 aa5.31□□□□□ -1.56
SLIRP-203ENST00000554074 ODAMA1E959 279 aa5.3□□□□□ -1.56
SLIRP-203ENST00000554074 ZNF729A6NN14 1252 aaPredicted RBP5.3□□□□□ -1.56
SLIRP-203ENST00000554074 ADARB2-AS1A8MUL3 147 aa5.3□□□□□ -1.56
SLIRP-203ENST00000554074 LEUTXA8MZ59 168 aa5.3□□□□□ -1.56
SLIRP-203ENST00000554074 OOSP1A8MZH6 123 aa5.3□□□□□ -1.56
SLIRP-203ENST00000554074 G3V4G9 280 aa5.3□□□□□ -1.56
SLIRP-203ENST00000554074 PEX14O75381 377 aa5.3□□□□□ -1.56
SLIRP-203ENST00000554074 CD2P06729 351 aa5.3□□□□□ -1.56
SLIRP-203ENST00000554074 OCM2P0CE71 109 aa5.3□□□□□ -1.56
SLIRP-203ENST00000554074 OCMP0CE72 109 aaPredicted RBP5.3□□□□□ -1.56
SLIRP-203ENST00000554074 PSMA1P25786 263 aaKnown RBP5.3□□□□□ -1.56
SLIRP-203ENST00000554074 MAPK3P27361 379 aaPredicted RBP5.3□□□□□ -1.56
SLIRP-203ENST00000554074 DUSP1P28562 367 aa5.3□□□□□ -1.56
SLIRP-203ENST00000554074 C21orf33P30042 268 aaPredicted RBP5.3□□□□□ -1.56
SLIRP-203ENST00000554074 BRS3P32247 399 aa5.3□□□□□ -1.56
SLIRP-203ENST00000554074 CEACAM3P40198 252 aa5.3□□□□□ -1.56
SLIRP-203ENST00000554074 MTNR1BP49286 362 aa5.3□□□□□ -1.56
SLIRP-203ENST00000554074 ZP1P60852 638 aa5.3□□□□□ -1.56
SLIRP-203ENST00000554074 PAX5Q02548 391 aa5.3□□□□□ -1.56
SLIRP-203ENST00000554074 CDK5R1Q15078 307 aa5.3□□□□□ -1.56
SLIRP-203ENST00000554074 SPHARQ15513 63 aa5.3□□□□□ -1.56
SLIRP-203ENST00000554074 PLA1AQ53H76 456 aa5.3□□□□□ -1.56
SLIRP-203ENST00000554074 FBLN7Q53RD9 439 aa5.3□□□□□ -1.56
SLIRP-203ENST00000554074 YIF1BQ5BJH7 314 aa5.3□□□□□ -1.56
SLIRP-203ENST00000554074 DMKNQ6E0U4 476 aaPredicted RBP5.3□□□□□ -1.56
SLIRP-203ENST00000554074 ELP2Q6IA86 826 aa5.3□□□□□ -1.56
SLIRP-203ENST00000554074 Q6P435 159 aa5.3□□□□□ -1.56
SLIRP-203ENST00000554074 ZNF367Q7RTV3 350 aa5.3□□□□□ -1.56
SLIRP-203ENST00000554074 TRAPPC6BQ86SZ2 158 aa5.3□□□□□ -1.56
SLIRP-203ENST00000554074 C1QL4Q86Z23 238 aa5.3□□□□□ -1.56
SLIRP-203ENST00000554074 SERPINA12Q8IW75 414 aa5.3□□□□□ -1.56
SLIRP-203ENST00000554074 ABHD12Q8N2K0 398 aa5.3□□□□□ -1.56
SLIRP-203ENST00000554074 TPRX1Q8N7U7 411 aa5.3□□□□□ -1.56
SLIRP-203ENST00000554074 PXT1Q8NFP0 134 aa5.3□□□□□ -1.56
SLIRP-203ENST00000554074 OR51A4Q8NGJ6 313 aa5.3□□□□□ -1.56
SLIRP-203ENST00000554074 OR5D14Q8NGL3 314 aa5.3□□□□□ -1.56
SLIRP-203ENST00000554074 OR13C3Q8NGS6 347 aa5.3□□□□□ -1.56
SLIRP-203ENST00000554074 NDNFQ8TB73 568 aa5.3□□□□□ -1.56
SLIRP-203ENST00000554074 GPR148Q8TDV2 347 aa5.3□□□□□ -1.56
SLIRP-203ENST00000554074 CPNE2Q96FN4 548 aaPredicted RBP5.3□□□□□ -1.56
SLIRP-203ENST00000554074 OCSTAMPQ9BR26 566 aa5.3□□□□□ -1.56
SLIRP-203ENST00000554074 ISG20L2Q9H9L3 353 aaKnown RBP5.3□□□□□ -1.56
SLIRP-203ENST00000554074 OR6C3Q9NZP0 311 aa5.3□□□□□ -1.56
SLIRP-203ENST00000554074 GSTK1Q9Y2Q3 226 aa5.3□□□□□ -1.56
SLIRP-203ENST00000554074 ZNF281Q9Y2X9 895 aa5.3□□□□□ -1.56
SLIRP-203ENST00000554074 HILPDAQ9Y5L2 63 aa5.3□□□□□ -1.56
SLIRP-203ENST00000554074 A0A087WXM4 84 aa5.29□□□□□ -1.56
SLIRP-203ENST00000554074 MEX3AA1L020 520 aaKnown RBP5.29□□□□□ -1.56
SLIRP-203ENST00000554074 LY6LH3BQJ8 138 aa5.29□□□□□ -1.56
SLIRP-203ENST00000554074 M0QZK8 103 aa5.29□□□□□ -1.56
SLIRP-203ENST00000554074 SIRPB1O00241 398 aa5.29□□□□□ -1.56
SLIRP-203ENST00000554074 SLC33A1O00400 549 aaPredicted RBP5.29□□□□□ -1.56
SLIRP-203ENST00000554074 SULT1B1O43704 296 aa5.29□□□□□ -1.56
SLIRP-203ENST00000554074 MMP23AO75900 390 aa5.29□□□□□ -1.56
SLIRP-203ENST00000554074 OR2F2O95006 317 aa5.29□□□□□ -1.56
SLIRP-203ENST00000554074 INMTO95050 263 aa5.29□□□□□ -1.56
SLIRP-203ENST00000554074 ZFPL1O95159 310 aa5.29□□□□□ -1.56
SLIRP-203ENST00000554074 CGB3P0DN86 165 aa5.29□□□□□ -1.56
SLIRP-203ENST00000554074 CGB7P0DN87 165 aa5.29□□□□□ -1.56
SLIRP-203ENST00000554074 CD28P10747 220 aa5.29□□□□□ -1.56
SLIRP-203ENST00000554074 ZNF44P15621 663 aa5.29□□□□□ -1.56
SLIRP-203ENST00000554074 GALP22466 123 aa5.29□□□□□ -1.56
SLIRP-203ENST00000554074 CDK2P24941 298 aa5.29□□□□□ -1.56
SLIRP-203ENST00000554074 PTGFRP43088 359 aa5.29□□□□□ -1.56
SLIRP-203ENST00000554074 VDAC2P45880 294 aaPredicted RBP5.29□□□□□ -1.56
SLIRP-203ENST00000554074 KCNJ3P48549 501 aa5.29□□□□□ -1.56
SLIRP-203ENST00000554074 PRRX1P54821 245 aa5.29□□□□□ -1.56
SLIRP-203ENST00000554074 BLCAPP62952 87 aa5.29□□□□□ -1.56
SLIRP-203ENST00000554074 CD83Q01151 205 aa5.29□□□□□ -1.56
SLIRP-203ENST00000554074 AESQ08117 197 aa5.29□□□□□ -1.56
SLIRP-203ENST00000554074 MLLT11Q13015 90 aaPredicted RBP5.29□□□□□ -1.56
SLIRP-203ENST00000554074 TPBGQ13641 420 aa5.29□□□□□ -1.56
SLIRP-203ENST00000554074 HABP2Q14520 560 aaPredicted RBP5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms