RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 TMEM42Q69YG0 159 aa2.42□□□□□ -2.02
SLIRP-202ENST00000553981 GLYATQ6IB77 296 aa2.42□□□□□ -2.02
SLIRP-202ENST00000553981 ERICH5Q6P6B1 374 aa2.42□□□□□ -2.02
SLIRP-202ENST00000553981 C11orf88Q6PI97 169 aa2.42□□□□□ -2.02
SLIRP-202ENST00000553981 Q6ZSR3 168 aa2.42□□□□□ -2.02
SLIRP-202ENST00000553981 KCTD8Q6ZWB6 473 aa2.42□□□□□ -2.02
SLIRP-202ENST00000553981 MOB3CQ70IA8 216 aa2.42□□□□□ -2.02
SLIRP-202ENST00000553981 SSX6Q7RTT6 188 aa2.42□□□□□ -2.02
SLIRP-202ENST00000553981 CENPVQ7Z7K6 275 aaPredicted RBP2.42□□□□□ -2.02
SLIRP-202ENST00000553981 HS3ST5Q8IZT8 346 aa2.42□□□□□ -2.02
SLIRP-202ENST00000553981 OSR2Q8N2R0 312 aa2.42□□□□□ -2.02
SLIRP-202ENST00000553981 OR5D13Q8NGL4 314 aa2.42□□□□□ -2.02
SLIRP-202ENST00000553981 OR6N2Q8NGY6 317 aa2.42□□□□□ -2.02
SLIRP-202ENST00000553981 OR2AJ1Q8NGZ0 328 aa2.42□□□□□ -2.02
SLIRP-202ENST00000553981 LEAP2Q969E1 77 aa2.42□□□□□ -2.02
SLIRP-202ENST00000553981 ITFG2Q969R8 447 aa2.42□□□□□ -2.02
SLIRP-202ENST00000553981 MALSU1Q96EH3 234 aa2.42□□□□□ -2.02
SLIRP-202ENST00000553981 PGAM5Q96HS1 289 aa2.42□□□□□ -2.02
SLIRP-202ENST00000553981 RBM14Q96PK6 669 aaKnown RBP2.42□□□□□ -2.02
SLIRP-202ENST00000553981 TEAD3Q99594 435 aa2.42□□□□□ -2.02
SLIRP-202ENST00000553981 NRIP2Q9BQI9 281 aa2.42□□□□□ -2.02
SLIRP-202ENST00000553981 HSPB9Q9BQS6 159 aa2.42□□□□□ -2.02
SLIRP-202ENST00000553981 ZNF649Q9BS31 505 aa2.42□□□□□ -2.02
SLIRP-202ENST00000553981 CHST6Q9GZX3 395 aa2.42□□□□□ -2.02
SLIRP-202ENST00000553981 NSRP1Q9H0G5 558 aaKnown RBP2.42□□□□□ -2.02
SLIRP-202ENST00000553981 ALX4Q9H161 411 aaPredicted RBP2.42□□□□□ -2.02
SLIRP-202ENST00000553981 ANKRD19PQ9H560 264 aa2.42□□□□□ -2.02
SLIRP-202ENST00000553981 DCLRE1BQ9H816 532 aa2.42□□□□□ -2.02
SLIRP-202ENST00000553981 PLSCR3Q9NRY6 295 aa2.42□□□□□ -2.02
SLIRP-202ENST00000553981 NKIRAS1Q9NYS0 192 aa2.42□□□□□ -2.02
SLIRP-202ENST00000553981 IL20Q9NYY1 176 aa2.42□□□□□ -2.02
SLIRP-202ENST00000553981 USE1Q9NZ43 259 aa2.42□□□□□ -2.02
SLIRP-202ENST00000553981 OR14J1Q9UGF5 321 aa2.42□□□□□ -2.02
SLIRP-202ENST00000553981 CD300AQ9UGN4 299 aa2.42□□□□□ -2.02
SLIRP-202ENST00000553981 SLC22A13Q9Y226 551 aa2.42□□□□□ -2.02
SLIRP-202ENST00000553981 TMEM5Q9Y2B1 443 aa2.42□□□□□ -2.02
SLIRP-202ENST00000553981 TBL2Q9Y4P3 447 aaKnown RBP2.42□□□□□ -2.02
SLIRP-202ENST00000553981 LYVE1Q9Y5Y7 322 aa2.42□□□□□ -2.02
SLIRP-202ENST00000553981 U3KQV3 271 aa2.42□□□□□ -2.02
SLIRP-202ENST00000553981 ABCA13Q86UQ4 5058 aa2.42□□□□□ -2.02
SLIRP-202ENST00000553981 HSPG2P98160 4391 aa2.41□□□□□ -2.02
SLIRP-202ENST00000553981 IGHV3-72A0A0B4J1Y9 119 aa2.41□□□□□ -2.02
SLIRP-202ENST00000553981 TRAV39A0A0B4J263 110 aa2.41□□□□□ -2.02
SLIRP-202ENST00000553981 IGKV1-9A0A0C4DH69 117 aa2.41□□□□□ -2.02
SLIRP-202ENST00000553981 A0A1B0GVY2 172 aa2.41□□□□□ -2.02
SLIRP-202ENST00000553981 A0A1W2PPE3 182 aa2.41□□□□□ -2.02
SLIRP-202ENST00000553981 PSMB11A5LHX3 300 aa2.41□□□□□ -2.02
SLIRP-202ENST00000553981 MAGEA13PA6NCF6 341 aa2.41□□□□□ -2.02
SLIRP-202ENST00000553981 TMEM210A6NLX4 147 aa2.41□□□□□ -2.02
SLIRP-202ENST00000553981 PRAC2D3DTV9 90 aa2.41□□□□□ -2.02
SLIRP-202ENST00000553981 CCL24O00175 119 aa2.41□□□□□ -2.02
SLIRP-202ENST00000553981 HSPB6O14558 160 aa2.41□□□□□ -2.02
SLIRP-202ENST00000553981 SLC22A2O15244 555 aa2.41□□□□□ -2.02
SLIRP-202ENST00000553981 NOS1APO75052 506 aaPredicted RBP2.41□□□□□ -2.02
SLIRP-202ENST00000553981 PEX14O75381 377 aa2.41□□□□□ -2.02
SLIRP-202ENST00000553981 TIPRLO75663 272 aa2.41□□□□□ -2.02
SLIRP-202ENST00000553981 OR2F2O95006 317 aa2.41□□□□□ -2.02
SLIRP-202ENST00000553981 GADD45GO95257 159 aa2.41□□□□□ -2.02
SLIRP-202ENST00000553981 FRMD6-AS1P0C7T7 363 aa2.41□□□□□ -2.02
SLIRP-202ENST00000553981 COX4I1P13073 169 aa2.41□□□□□ -2.02
SLIRP-202ENST00000553981 SPNP16150 400 aa2.41□□□□□ -2.02
SLIRP-202ENST00000553981 ALOX5APP20292 161 aa2.41□□□□□ -2.02
SLIRP-202ENST00000553981 ATP6V1B2P21281 511 aa2.41□□□□□ -2.02
SLIRP-202ENST00000553981 MPZP25189 248 aa2.41□□□□□ -2.02
SLIRP-202ENST00000553981 C21orf33P30042 268 aaPredicted RBP2.41□□□□□ -2.02
SLIRP-202ENST00000553981 MYCNOSP40205 109 aa2.41□□□□□ -2.02
SLIRP-202ENST00000553981 VHLP40337 213 aa2.41□□□□□ -2.02
SLIRP-202ENST00000553981 NAA10P41227 235 aaPredicted RBP2.41□□□□□ -2.02
SLIRP-202ENST00000553981 HAAOP46952 286 aa2.41□□□□□ -2.02
SLIRP-202ENST00000553981 OR3A1P47881 315 aa2.41□□□□□ -2.02
SLIRP-202ENST00000553981 OR3A4PP47883 348 aa2.41□□□□□ -2.02
SLIRP-202ENST00000553981 CAPZA1P52907 286 aa2.41□□□□□ -2.02
SLIRP-202ENST00000553981 GNB1P62873 340 aa2.41□□□□□ -2.02
SLIRP-202ENST00000553981 GRB2P62993 217 aaKnown RBP2.41□□□□□ -2.02
SLIRP-202ENST00000553981 EWSR1Q01844 656 aaKnown RBP eCLIP2.41□□□□□ -2.02
SLIRP-202ENST00000553981 HLA-DRB5Q30154 266 aa2.41□□□□□ -2.02
SLIRP-202ENST00000553981 CEACAM21Q3KPI0 293 aa2.41□□□□□ -2.02
SLIRP-202ENST00000553981 SLC36A3Q495N2 470 aa2.41□□□□□ -2.02
SLIRP-202ENST00000553981 C9orf152Q5JTZ5 239 aa2.41□□□□□ -2.02
SLIRP-202ENST00000553981 METTL21CQ5VZV1 264 aa2.41□□□□□ -2.02
SLIRP-202ENST00000553981 TMEM236Q5W0B7 351 aa2.41□□□□□ -2.02
SLIRP-202ENST00000553981 LCN8Q6JVE9 175 aa2.41□□□□□ -2.02
SLIRP-202ENST00000553981 Q6P435 159 aa2.41□□□□□ -2.02
SLIRP-202ENST00000553981 DNM1P34Q6PK57 102 aa2.41□□□□□ -2.02
SLIRP-202ENST00000553981 RASSF6Q6ZTQ3 369 aa2.41□□□□□ -2.02
SLIRP-202ENST00000553981 ERI1Q8IV48 349 aaKnown RBP2.41□□□□□ -2.02
SLIRP-202ENST00000553981 ZDHHC23Q8IYP9 409 aa2.41□□□□□ -2.02
SLIRP-202ENST00000553981 ZNF561Q8N587 486 aa2.41□□□□□ -2.02
SLIRP-202ENST00000553981 C5orf56Q8N8D9 126 aa2.41□□□□□ -2.02
SLIRP-202ENST00000553981 KLHL30-AS1Q8NEE0 82 aa2.41□□□□□ -2.02
SLIRP-202ENST00000553981 PROKR2Q8NFJ6 384 aa2.41□□□□□ -2.02
SLIRP-202ENST00000553981 OR5A2Q8NGI9 324 aa2.41□□□□□ -2.02
SLIRP-202ENST00000553981 OR52H1Q8NGJ2 320 aa2.41□□□□□ -2.02
SLIRP-202ENST00000553981 OR6K6Q8NGW6 343 aa2.41□□□□□ -2.02
SLIRP-202ENST00000553981 OTOSQ8NHW6 89 aa2.41□□□□□ -2.02
SLIRP-202ENST00000553981 TRMT10AQ8TBZ6 339 aaKnown RBP2.41□□□□□ -2.02
SLIRP-202ENST00000553981 OR51E1Q8TCB6 317 aa2.41□□□□□ -2.02
SLIRP-202ENST00000553981 RPS4Y2Q8TD47 263 aa2.41□□□□□ -2.02
SLIRP-202ENST00000553981 MYOZ3Q8TDC0 251 aa2.41□□□□□ -2.02
SLIRP-202ENST00000553981 GNPDA2Q8TDQ7 276 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms