RNA–Protein interactions for RNA: ENST00000553513.1

PCNX4-206, Transcript of pecanex 4, humanhuman

TSL 4

Gene PCNX4, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-206ENST00000553513 MED21Q13503 144 aa2.36□□□□□ -2.03
PCNX4-206ENST00000553513 ZNF678Q5SXM1 525 aa2.36□□□□□ -2.03
PCNX4-206ENST00000553513 MRPL2Q5T653 305 aaKnown RBP2.36□□□□□ -2.03
PCNX4-206ENST00000553513 SLC25A34Q6PIV7 304 aa2.36□□□□□ -2.03
PCNX4-206ENST00000553513 KRTAP5-5Q701N2 237 aaPredicted RBP2.36□□□□□ -2.03
PCNX4-206ENST00000553513 DPPA2Q7Z7J5 298 aa2.36□□□□□ -2.03
PCNX4-206ENST00000553513 NT5DC3Q86UY8 548 aa2.36□□□□□ -2.03
PCNX4-206ENST00000553513 SGPP2Q8IWX5 399 aa2.36□□□□□ -2.03
PCNX4-206ENST00000553513 LINC00337Q8N6G1 96 aa2.36□□□□□ -2.03
PCNX4-206ENST00000553513 SLC35G3Q8N808 338 aa2.36□□□□□ -2.03
PCNX4-206ENST00000553513 ZNF555Q8NEP9 628 aa2.36□□□□□ -2.03
PCNX4-206ENST00000553513 ESR2Q92731 530 aa2.36□□□□□ -2.03
PCNX4-206ENST00000553513 CLDN23Q96B33 292 aa2.36□□□□□ -2.03
PCNX4-206ENST00000553513 CMTM5Q96DZ9 223 aa2.36□□□□□ -2.03
PCNX4-206ENST00000553513 FAM210AQ96ND0 272 aa2.36□□□□□ -2.03
PCNX4-206ENST00000553513 OLFM3Q96PB7 478 aa2.36□□□□□ -2.03
PCNX4-206ENST00000553513 PEBP4Q96S96 227 aa2.36□□□□□ -2.03
PCNX4-206ENST00000553513 TMEM208Q9BTX3 173 aa2.36□□□□□ -2.03
PCNX4-206ENST00000553513 ZNF426Q9BUY5 554 aa2.36□□□□□ -2.03
PCNX4-206ENST00000553513 ZNF436Q9C0F3 470 aaPredicted RBP2.36□□□□□ -2.03
PCNX4-206ENST00000553513 PARVGQ9HBI0 331 aa2.36□□□□□ -2.03
PCNX4-206ENST00000553513 OPN4Q9UHM6 478 aa2.36□□□□□ -2.03
PCNX4-206ENST00000553513 SCML1Q9UN30 329 aa2.36□□□□□ -2.03
PCNX4-206ENST00000553513 BTRCQ9Y297 605 aa2.36□□□□□ -2.03
PCNX4-206ENST00000553513 ZNF835Q9Y2P0 537 aa2.36□□□□□ -2.03
PCNX4-206ENST00000553513 SIGLEC1Q9BZZ2 1709 aa2.35□□□□□ -2.03
PCNX4-206ENST00000553513 IGLV2-18A0A075B6J9 118 aa2.35□□□□□ -2.03
PCNX4-206ENST00000553513 IGHV2-26A0A0B4J1V2 119 aa2.35□□□□□ -2.03
PCNX4-206ENST00000553513 GOLGA6L4A6NEF3 574 aa2.35□□□□□ -2.03
PCNX4-206ENST00000553513 GOLGA8KD6RF30 607 aa2.35□□□□□ -2.03
PCNX4-206ENST00000553513 GOLGA8MH3BSY2 632 aa2.35□□□□□ -2.03
PCNX4-206ENST00000553513 CCRL2O00421 344 aa2.35□□□□□ -2.03
PCNX4-206ENST00000553513 SSNA1O43805 119 aa2.35□□□□□ -2.03
PCNX4-206ENST00000553513 HPGDSO60760 199 aa2.35□□□□□ -2.03
PCNX4-206ENST00000553513 E2F6O75461 281 aa2.35□□□□□ -2.03
PCNX4-206ENST00000553513 CRTAPO75718 401 aaPredicted RBP2.35□□□□□ -2.03
PCNX4-206ENST00000553513 CDRT1O95170 752 aa2.35□□□□□ -2.03
PCNX4-206ENST00000553513 ZNF286BP0CG31 522 aa2.35□□□□□ -2.03
PCNX4-206ENST00000553513 GTF2F2P13984 249 aa2.35□□□□□ -2.03
PCNX4-206ENST00000553513 MAGEA2P43356 314 aa2.35□□□□□ -2.03
PCNX4-206ENST00000553513 TGM4P49221 684 aa2.35□□□□□ -2.03
PCNX4-206ENST00000553513 DYNLL1P63167 89 aaKnown RBP2.35□□□□□ -2.03
PCNX4-206ENST00000553513 GTF2BQ00403 316 aa2.35□□□□□ -2.03
PCNX4-206ENST00000553513 ZNF616Q08AN1 781 aa2.35□□□□□ -2.03
PCNX4-206ENST00000553513 PAFAH1B3Q15102 231 aaKnown RBP2.35□□□□□ -2.03
PCNX4-206ENST00000553513 FAM162BQ5T6X4 162 aa2.35□□□□□ -2.03
PCNX4-206ENST00000553513 FAM104BQ5XKR9 115 aa2.35□□□□□ -2.03
PCNX4-206ENST00000553513 GLYATQ6IB77 296 aa2.35□□□□□ -2.03
PCNX4-206ENST00000553513 FAM131AQ6UXB0 335 aa2.35□□□□□ -2.03
PCNX4-206ENST00000553513 PAGE2Q7Z2X7 111 aa2.35□□□□□ -2.03
PCNX4-206ENST00000553513 ZNF709Q8N972 641 aa2.35□□□□□ -2.03
PCNX4-206ENST00000553513 CYGBQ8WWM9 190 aa2.35□□□□□ -2.03
PCNX4-206ENST00000553513 SLC19A3Q9BZV2 496 aa2.35□□□□□ -2.03
PCNX4-206ENST00000553513 WDR54Q9H977 334 aa2.35□□□□□ -2.03
PCNX4-206ENST00000553513 FAM206AQ9NX38 181 aa2.35□□□□□ -2.03
PCNX4-206ENST00000553513 RBM12B-AS1Q9P1G2 102 aa2.35□□□□□ -2.03
PCNX4-206ENST00000553513 TRAPPC1Q9Y5R8 145 aa2.35□□□□□ -2.03
PCNX4-206ENST00000553513 SNX10Q9Y5X0 201 aa2.35□□□□□ -2.03
PCNX4-206ENST00000553513 S4R3C0 116 aa2.35□□□□□ -2.03
PCNX4-206ENST00000553513 LOXHD1Q8IVV2 1947 aa2.34□□□□□ -2.03
PCNX4-206ENST00000553513 IZUMO1RA6ND01 250 aa2.34□□□□□ -2.03
PCNX4-206ENST00000553513 ARGFXA6NJG6 315 aa2.34□□□□□ -2.03
PCNX4-206ENST00000553513 ZNF233A6NK53 670 aa2.34□□□□□ -2.03
PCNX4-206ENST00000553513 J3QLI3 93 aa2.34□□□□□ -2.03
PCNX4-206ENST00000553513 K7EPK0 472 aa2.34□□□□□ -2.03
PCNX4-206ENST00000553513 FFAR1O14842 300 aa2.34□□□□□ -2.03
PCNX4-206ENST00000553513 ATP8B1O43520 1251 aa2.34□□□□□ -2.03
PCNX4-206ENST00000553513 SYNGR1O43759 233 aa2.34□□□□□ -2.03
PCNX4-206ENST00000553513 NIPSNAP2O75323 286 aa2.34□□□□□ -2.03
PCNX4-206ENST00000553513 CNMDO75829 334 aa2.34□□□□□ -2.03
PCNX4-206ENST00000553513 KCNK2O95069 426 aa2.34□□□□□ -2.03
PCNX4-206ENST00000553513 WISP3O95389 354 aaPredicted RBP2.34□□□□□ -2.03
PCNX4-206ENST00000553513 BRI3O95415 125 aa2.34□□□□□ -2.03
PCNX4-206ENST00000553513 PSMG1O95456 288 aa2.34□□□□□ -2.03
PCNX4-206ENST00000553513 CA2P00918 260 aa2.34□□□□□ -2.03
PCNX4-206ENST00000553513 LHBP01229 141 aa2.34□□□□□ -2.03
PCNX4-206ENST00000553513 HLA-AP01891 365 aaKnown RBP2.34□□□□□ -2.03
PCNX4-206ENST00000553513 OR5AC1P0C628 307 aa2.34□□□□□ -2.03
PCNX4-206ENST00000553513 PTHLHP12272 177 aa2.34□□□□□ -2.03
PCNX4-206ENST00000553513 CD99P14209 185 aa2.34□□□□□ -2.03
PCNX4-206ENST00000553513 CFL1P23528 166 aaKnown RBP2.34□□□□□ -2.03
PCNX4-206ENST00000553513 SULT1A2P50226 295 aa2.34□□□□□ -2.03
PCNX4-206ENST00000553513 RAB2AP61019 212 aa2.34□□□□□ -2.03
PCNX4-206ENST00000553513 ELF3P78545 371 aaPredicted RBP2.34□□□□□ -2.03
PCNX4-206ENST00000553513 PDZD11Q5EBL8 140 aa2.34□□□□□ -2.03
PCNX4-206ENST00000553513 TIMM23BQ5SRD1 257 aa2.34□□□□□ -2.03
PCNX4-206ENST00000553513 PTRHD1Q6GMV3 140 aaKnown RBP2.34□□□□□ -2.03
PCNX4-206ENST00000553513 SPINT4Q6UDR6 99 aa2.34□□□□□ -2.03
PCNX4-206ENST00000553513 CLEC18BQ6UXF7 455 aa2.34□□□□□ -2.03
PCNX4-206ENST00000553513 SPNS3Q6ZMD2 512 aa2.34□□□□□ -2.03
PCNX4-206ENST00000553513 ZBTB8OSQ8IWT0 167 aa2.34□□□□□ -2.03
PCNX4-206ENST00000553513 SLC25A45Q8N413 288 aa2.34□□□□□ -2.03
PCNX4-206ENST00000553513 ST20-AS1Q8NBB2 130 aa2.34□□□□□ -2.03
PCNX4-206ENST00000553513 OR5L1Q8NGL2 311 aa2.34□□□□□ -2.03
PCNX4-206ENST00000553513 OR8S1Q8NH09 359 aa2.34□□□□□ -2.03
PCNX4-206ENST00000553513 ERMNQ8TAM6 284 aa2.34□□□□□ -2.03
PCNX4-206ENST00000553513 STOML3Q8TAV4 291 aa2.34□□□□□ -2.03
PCNX4-206ENST00000553513 GPR22Q99680 433 aa2.34□□□□□ -2.03
PCNX4-206ENST00000553513 SEC22CQ9BRL7 303 aa2.34□□□□□ -2.03
PCNX4-206ENST00000553513 SCRT1Q9BWW7 348 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms