RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 TMEM56-RWDD3S4R434 201 aa11.08□□□□□ -0.64
SHMT2-205ENST00000553474 C3orf85A0A1B0GTC6 90 aa11.08□□□□□ -0.64
SHMT2-205ENST00000553474 ANKRD30BLA7E2S9 258 aa11.08□□□□□ -0.64
SHMT2-205ENST00000553474 FAM166BA8MTA8 275 aa11.08□□□□□ -0.64
SHMT2-205ENST00000553474 PHF1O43189 567 aaPredicted RBP11.08□□□□□ -0.64
SHMT2-205ENST00000553474 MED6O75586 246 aa11.08□□□□□ -0.64
SHMT2-205ENST00000553474 BCL3P20749 454 aa11.08□□□□□ -0.64
SHMT2-205ENST00000553474 CCNOP22674 350 aa11.08□□□□□ -0.64
SHMT2-205ENST00000553474 CD82P27701 267 aa11.08□□□□□ -0.64
SHMT2-205ENST00000553474 APLNRP35414 380 aa11.08□□□□□ -0.64
SHMT2-205ENST00000553474 KCNJ3P48549 501 aa11.08□□□□□ -0.64
SHMT2-205ENST00000553474 CLN3Q13286 438 aa11.08□□□□□ -0.64
SHMT2-205ENST00000553474 SLC10A1Q14973 349 aa11.08□□□□□ -0.64
SHMT2-205ENST00000553474 SWI5Q1ZZU3 235 aa11.08□□□□□ -0.64
SHMT2-205ENST00000553474 OR2A2Q6IF42 318 aa11.08□□□□□ -0.64
SHMT2-205ENST00000553474 IGF2-ASQ6U949 168 aa11.08□□□□□ -0.64
SHMT2-205ENST00000553474 LYZL2Q7Z4W2 148 aa11.08□□□□□ -0.64
SHMT2-205ENST00000553474 OR4A4PQ8NGN8 299 aa11.08□□□□□ -0.64
SHMT2-205ENST00000553474 IL22RA2Q969J5 263 aa11.08□□□□□ -0.64
SHMT2-205ENST00000553474 PKIBQ9C010 78 aa11.08□□□□□ -0.64
SHMT2-205ENST00000553474 IGF2RP11717 2491 aa11.07□□□□□ -0.64
SHMT2-205ENST00000553474 A0A096LPE4 126 aa11.07□□□□□ -0.64
SHMT2-205ENST00000553474 A0A1W2PPZ6 126 aa11.07□□□□□ -0.64
SHMT2-205ENST00000553474 CLEC18AA5D8T8 446 aa11.07□□□□□ -0.64
SHMT2-205ENST00000553474 CD300LBA8K4G0 201 aa11.07□□□□□ -0.64
SHMT2-205ENST00000553474 ZNF732B4DXR9 585 aa11.07□□□□□ -0.64
SHMT2-205ENST00000553474 TRDCB7Z8K6 153 aa11.07□□□□□ -0.64
SHMT2-205ENST00000553474 GPR31O00270 319 aa11.07□□□□□ -0.64
SHMT2-205ENST00000553474 TUSC2O75896 110 aa11.07□□□□□ -0.64
SHMT2-205ENST00000553474 WNT2P09544 360 aa11.07□□□□□ -0.64
SHMT2-205ENST00000553474 PVALBP20472 110 aaPredicted RBP11.07□□□□□ -0.64
SHMT2-205ENST00000553474 S100GP29377 79 aa11.07□□□□□ -0.64
SHMT2-205ENST00000553474 MEOX1P50221 254 aa11.07□□□□□ -0.64
SHMT2-205ENST00000553474 GPM6AP51674 278 aa11.07□□□□□ -0.64
SHMT2-205ENST00000553474 PRSS12P56730 875 aa11.07□□□□□ -0.64
SHMT2-205ENST00000553474 SOX8P57073 446 aa11.07□□□□□ -0.64
SHMT2-205ENST00000553474 GNG3P63215 75 aa11.07□□□□□ -0.64
SHMT2-205ENST00000553474 IL24Q13007 206 aa11.07□□□□□ -0.64
SHMT2-205ENST00000553474 HMGN3Q15651 99 aa11.07□□□□□ -0.64
SHMT2-205ENST00000553474 SP6Q3SY56 376 aa11.07□□□□□ -0.64
SHMT2-205ENST00000553474 PHLDA2Q53GA4 152 aa11.07□□□□□ -0.64
SHMT2-205ENST00000553474 BTNL8Q6UX41 500 aa11.07□□□□□ -0.64
SHMT2-205ENST00000553474 VASH2Q86V25 355 aa11.07□□□□□ -0.64
SHMT2-205ENST00000553474 ZNF565Q8N9K5 539 aa11.07□□□□□ -0.64
SHMT2-205ENST00000553474 CLEC18CQ8NCF0 446 aa11.07□□□□□ -0.64
SHMT2-205ENST00000553474 OR4D5Q8NGN0 318 aa11.07□□□□□ -0.64
SHMT2-205ENST00000553474 OR5P3Q8WZ94 311 aa11.07□□□□□ -0.64
SHMT2-205ENST00000553474 DYRK2Q92630 601 aa11.07□□□□□ -0.64
SHMT2-205ENST00000553474 AIFM2Q9BRQ8 373 aa11.07□□□□□ -0.64
SHMT2-205ENST00000553474 GINS3Q9BRX5 216 aa11.07□□□□□ -0.64
SHMT2-205ENST00000553474 ZNF175Q9Y473 711 aa11.07□□□□□ -0.64
SHMT2-205ENST00000553474 APC2O95996 2303 aa11.07□□□□□ -0.64
SHMT2-205ENST00000553474 ACACAQ13085 2346 aa11.07□□□□□ -0.64
SHMT2-205ENST00000553474 DNAJC13O75165 2243 aa11.07□□□□□ -0.64
SHMT2-205ENST00000553474 MED19A0JLT2 244 aaPredicted RBP11.06□□□□□ -0.64
SHMT2-205ENST00000553474 FAM221AA4D161 298 aa11.06□□□□□ -0.64
SHMT2-205ENST00000553474 LRP5LA4QPB2 252 aa11.06□□□□□ -0.64
SHMT2-205ENST00000553474 SCGB1D2O95969 90 aa11.06□□□□□ -0.64
SHMT2-205ENST00000553474 CD5P06127 495 aa11.06□□□□□ -0.64
SHMT2-205ENST00000553474 MMP9P14780 707 aa11.06□□□□□ -0.64
SHMT2-205ENST00000553474 ADCYAP1P18509 176 aa11.06□□□□□ -0.64
SHMT2-205ENST00000553474 GNRHRP30968 328 aa11.06□□□□□ -0.64
SHMT2-205ENST00000553474 DVL1P1P54792 670 aaPredicted RBP11.06□□□□□ -0.64
SHMT2-205ENST00000553474 DHRS7BQ6IAN0 325 aaPredicted RBP11.06□□□□□ -0.64
SHMT2-205ENST00000553474 BRICD5Q6PL45 260 aa11.06□□□□□ -0.64
SHMT2-205ENST00000553474 FIP1L1Q6UN15 594 aaKnown RBP11.06□□□□□ -0.64
SHMT2-205ENST00000553474 Q6ZPA2 131 aa11.06□□□□□ -0.64
SHMT2-205ENST00000553474 LINC00696Q6ZRV3 163 aa11.06□□□□□ -0.64
SHMT2-205ENST00000553474 CMTM1Q8IZ96 169 aa11.06□□□□□ -0.64
SHMT2-205ENST00000553474 PUSL1Q8N0Z8 303 aaKnown RBP11.06□□□□□ -0.64
SHMT2-205ENST00000553474 SLAMF9Q96A28 289 aa11.06□□□□□ -0.64
SHMT2-205ENST00000553474 NRIP2Q9BQI9 281 aa11.06□□□□□ -0.64
SHMT2-205ENST00000553474 HES7Q9BYE0 225 aa11.06□□□□□ -0.64
SHMT2-205ENST00000553474 HRH4Q9H3N8 390 aa11.06□□□□□ -0.64
SHMT2-205ENST00000553474 TREM1Q9NP99 234 aa11.06□□□□□ -0.64
SHMT2-205ENST00000553474 GLRX2Q9NS18 164 aa11.06□□□□□ -0.64
SHMT2-205ENST00000553474 TREM2Q9NZC2 230 aa11.06□□□□□ -0.64
SHMT2-205ENST00000553474 MTCH1Q9NZJ7 389 aa11.06□□□□□ -0.64
SHMT2-205ENST00000553474 NDRG3Q9UGV2 375 aa11.06□□□□□ -0.64
SHMT2-205ENST00000553474 STRAPQ9Y3F4 350 aaKnown RBP11.06□□□□□ -0.64
SHMT2-205ENST00000553474 ASPMQ8IZT6 3477 aa11.06□□□□□ -0.64
SHMT2-205ENST00000553474 ZNF407Q9C0G0 2248 aa11.06□□□□□ -0.64
SHMT2-205ENST00000553474 FBXO24O75426 580 aa11.05□□□□□ -0.64
SHMT2-205ENST00000553474 SPP1P10451 314 aa11.05□□□□□ -0.64
SHMT2-205ENST00000553474 BTF3P20290 206 aaKnown RBP11.05□□□□□ -0.64
SHMT2-205ENST00000553474 RFC3P40938 356 aa11.05□□□□□ -0.64
SHMT2-205ENST00000553474 LPAR6P43657 344 aa11.05□□□□□ -0.64
SHMT2-205ENST00000553474 ZNF266Q14584 549 aa11.05□□□□□ -0.64
SHMT2-205ENST00000553474 FBXW9Q5XUX1 488 aa11.05□□□□□ -0.64
SHMT2-205ENST00000553474 Q8IYB0 196 aa11.05□□□□□ -0.64
SHMT2-205ENST00000553474 SLC35G3Q8N808 338 aa11.05□□□□□ -0.64
SHMT2-205ENST00000553474 TMEM178AQ8NBL3 297 aa11.05□□□□□ -0.64
SHMT2-205ENST00000553474 NAXEQ8NCW5 288 aa11.05□□□□□ -0.64
SHMT2-205ENST00000553474 OR1K1Q8NGR3 316 aa11.05□□□□□ -0.64
SHMT2-205ENST00000553474 LUZP4Q9P127 313 aa11.05□□□□□ -0.64
SHMT2-205ENST00000553474 CHD8Q9HCK8 2581 aa11.05□□□□□ -0.64
SHMT2-205ENST00000553474 HEXAP06865 529 aa11.05□□□□□ -0.64
SHMT2-205ENST00000553474 DANCRP0C864 163 aa11.05□□□□□ -0.64
SHMT2-205ENST00000553474 MDH2P40926 338 aaKnown RBP11.05□□□□□ -0.64
SHMT2-205ENST00000553474 UCP2P55851 309 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms