RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 NUDT16L1Q9BRJ7 211 aaKnown RBP12.23□□□□□ -0.45
MTHFD1-204ENST00000553405 DPPA5A6NC42 116 aa12.22□□□□□ -0.45
MTHFD1-204ENST00000553405 ZNF701M0R085 212 aaPredicted RBP12.22□□□□□ -0.45
MTHFD1-204ENST00000553405 ENSAO43768 121 aaKnown RBP12.22□□□□□ -0.45
MTHFD1-204ENST00000553405 GLAP06280 429 aa12.22□□□□□ -0.45
MTHFD1-204ENST00000553405 MMP9P14780 707 aa12.22□□□□□ -0.45
MTHFD1-204ENST00000553405 FUT3P21217 361 aa12.22□□□□□ -0.45
MTHFD1-204ENST00000553405 KCNJ3P48549 501 aa12.22□□□□□ -0.45
MTHFD1-204ENST00000553405 P2RX3P56373 397 aa12.22□□□□□ -0.45
MTHFD1-204ENST00000553405 ZNF273Q14593 569 aa12.22□□□□□ -0.45
MTHFD1-204ENST00000553405 ATXN7L3Q14CW9 347 aaPredicted RBP12.22□□□□□ -0.45
MTHFD1-204ENST00000553405 PLAC9Q5JTB6 97 aa12.22□□□□□ -0.45
MTHFD1-204ENST00000553405 TMEM200BQ69YZ2 307 aa12.22□□□□□ -0.45
MTHFD1-204ENST00000553405 RAB12Q6IQ22 244 aa12.22□□□□□ -0.45
MTHFD1-204ENST00000553405 CLEC9AQ6UXN8 241 aa12.22□□□□□ -0.45
MTHFD1-204ENST00000553405 Q6ZPA2 131 aa12.22□□□□□ -0.45
MTHFD1-204ENST00000553405 GLCCI1Q86VQ1 547 aa12.22□□□□□ -0.45
MTHFD1-204ENST00000553405 Q8N7P7 452 aa12.22□□□□□ -0.45
MTHFD1-204ENST00000553405 TPRX1Q8N7U7 411 aa12.22□□□□□ -0.45
MTHFD1-204ENST00000553405 OR4M1Q8NGD0 313 aa12.22□□□□□ -0.45
MTHFD1-204ENST00000553405 SULT4A1Q9BR01 284 aa12.22□□□□□ -0.45
MTHFD1-204ENST00000553405 SIRPDQ9H106 197 aa12.22□□□□□ -0.45
MTHFD1-204ENST00000553405 NCOR1P1Q9H4R4 102 aa12.22□□□□□ -0.45
MTHFD1-204ENST00000553405 SPACA1Q9HBV2 294 aa12.22□□□□□ -0.45
MTHFD1-204ENST00000553405 ABRACLQ9P1F3 81 aa12.22□□□□□ -0.45
MTHFD1-204ENST00000553405 SPATA2Q9UM82 520 aa12.22□□□□□ -0.45
MTHFD1-204ENST00000553405 KCNK7Q9Y2U2 307 aa12.22□□□□□ -0.45
MTHFD1-204ENST00000553405 ETV7Q9Y603 341 aa12.22□□□□□ -0.45
MTHFD1-204ENST00000553405 HSPB6O14558 160 aa12.21□□□□□ -0.45
MTHFD1-204ENST00000553405 FSHBP01225 129 aa12.21□□□□□ -0.45
MTHFD1-204ENST00000553405 CGB3P0DN86 165 aa12.21□□□□□ -0.45
MTHFD1-204ENST00000553405 CGB7P0DN87 165 aa12.21□□□□□ -0.45
MTHFD1-204ENST00000553405 GATA3P23771 443 aa12.21□□□□□ -0.45
MTHFD1-204ENST00000553405 RANBP1P43487 201 aa12.21□□□□□ -0.45
MTHFD1-204ENST00000553405 GLIPR1P48060 266 aa12.21□□□□□ -0.45
MTHFD1-204ENST00000553405 RPL31P62899 125 aaKnown RBP12.21□□□□□ -0.45
MTHFD1-204ENST00000553405 AESQ08117 197 aa12.21□□□□□ -0.45
MTHFD1-204ENST00000553405 DYNC1I2Q13409 638 aaKnown RBP12.21□□□□□ -0.45
MTHFD1-204ENST00000553405 ZNF497Q6ZNH5 498 aa12.21□□□□□ -0.45
MTHFD1-204ENST00000553405 DYRK2Q92630 601 aa12.21□□□□□ -0.45
MTHFD1-204ENST00000553405 KCTD12Q96CX2 325 aaKnown RBP12.21□□□□□ -0.45
MTHFD1-204ENST00000553405 URM1Q9BTM9 101 aaKnown RBP12.21□□□□□ -0.45
MTHFD1-204ENST00000553405 RHBDL2Q9NX52 303 aa12.21□□□□□ -0.45
MTHFD1-204ENST00000553405 HSF4Q9ULV5 492 aa12.21□□□□□ -0.45
MTHFD1-204ENST00000553405 PEX16Q9Y5Y5 336 aa12.21□□□□□ -0.45
MTHFD1-204ENST00000553405 A0A0G2JMP0 313 aa12.2□□□□□ -0.46
MTHFD1-204ENST00000553405 A0A0X1KG70 313 aa12.2□□□□□ -0.46
MTHFD1-204ENST00000553405 SMIM31A0A1B0GVY4 71 aa12.2□□□□□ -0.46
MTHFD1-204ENST00000553405 ODAMA1E959 279 aa12.2□□□□□ -0.46
MTHFD1-204ENST00000553405 J3QLI3 93 aa12.2□□□□□ -0.46
MTHFD1-204ENST00000553405 PPIAL4GP0DN37 164 aa12.2□□□□□ -0.46
MTHFD1-204ENST00000553405 BLVRBP30043 206 aaPredicted RBP12.2□□□□□ -0.46
MTHFD1-204ENST00000553405 VEGFCP49767 419 aa12.2□□□□□ -0.46
MTHFD1-204ENST00000553405 MEF2CQ06413 473 aaPredicted RBP12.2□□□□□ -0.46
MTHFD1-204ENST00000553405 EDDM3AQ14507 147 aa12.2□□□□□ -0.46
MTHFD1-204ENST00000553405 CR1LQ2VPA4 569 aa12.2□□□□□ -0.46
MTHFD1-204ENST00000553405 ATAD3CQ5T2N8 411 aa12.2□□□□□ -0.46
MTHFD1-204ENST00000553405 DCAF12L2Q5VW00 463 aa12.2□□□□□ -0.46
MTHFD1-204ENST00000553405 GDPD3Q7L5L3 318 aa12.2□□□□□ -0.46
MTHFD1-204ENST00000553405 C6orf201Q7Z4U5 140 aa12.2□□□□□ -0.46
MTHFD1-204ENST00000553405 KIR3DL3Q8N743 410 aa12.2□□□□□ -0.46
MTHFD1-204ENST00000553405 OR4M2Q8NGB6 313 aa12.2□□□□□ -0.46
MTHFD1-204ENST00000553405 PPP1R35Q8TAP8 253 aa12.2□□□□□ -0.46
MTHFD1-204ENST00000553405 H1FXQ92522 213 aaKnown RBP12.2□□□□□ -0.46
MTHFD1-204ENST00000553405 CORO2AQ92828 525 aa12.2□□□□□ -0.46
MTHFD1-204ENST00000553405 ARHGAP5-AS1Q96IT6 56 aa12.2□□□□□ -0.46
MTHFD1-204ENST00000553405 TMEM160Q9NX00 188 aa12.2□□□□□ -0.46
MTHFD1-204ENST00000553405 CCDC59Q9P031 241 aaKnown RBP12.2□□□□□ -0.46
MTHFD1-204ENST00000553405 KIF25Q9UIL4 384 aa12.2□□□□□ -0.46
MTHFD1-204ENST00000553405 KIAA2026Q5HYC2 2103 aa12.2□□□□□ -0.46
MTHFD1-204ENST00000553405 NAV3Q8IVL0 2385 aa12.19□□□□□ -0.46
MTHFD1-204ENST00000553405 SETD2Q9BYW2 2564 aaPredicted RBP12.19□□□□□ -0.46
MTHFD1-204ENST00000553405 MEX3AA1L020 520 aaKnown RBP12.19□□□□□ -0.46
MTHFD1-204ENST00000553405 A6NHS1 94 aa12.19□□□□□ -0.46
MTHFD1-204ENST00000553405 A8MV72 311 aaPredicted RBP12.19□□□□□ -0.46
MTHFD1-204ENST00000553405 MFNGO00587 321 aa12.19□□□□□ -0.46
MTHFD1-204ENST00000553405 MT-ND4P03905 459 aa12.19□□□□□ -0.46
MTHFD1-204ENST00000553405 LIPFP07098 398 aa12.19□□□□□ -0.46
MTHFD1-204ENST00000553405 CCL3L1P16619 93 aa12.19□□□□□ -0.46
MTHFD1-204ENST00000553405 ZNF182P17025 639 aaPredicted RBP12.19□□□□□ -0.46
MTHFD1-204ENST00000553405 RORCP51449 518 aa12.19□□□□□ -0.46
MTHFD1-204ENST00000553405 KRBOX4Q5JUW0 171 aa12.19□□□□□ -0.46
MTHFD1-204ENST00000553405 OLFML2AQ68BL7 652 aa12.19□□□□□ -0.46
MTHFD1-204ENST00000553405 SLC35E4Q6ICL7 350 aa12.19□□□□□ -0.46
MTHFD1-204ENST00000553405 C1orf122Q6ZSJ8 110 aa12.19□□□□□ -0.46
MTHFD1-204ENST00000553405 OR56B1Q8NGI3 324 aa12.19□□□□□ -0.46
MTHFD1-204ENST00000553405 OR10R2Q8NGX6 335 aa12.19□□□□□ -0.46
MTHFD1-204ENST00000553405 TNFRSF14Q92956 283 aa12.19□□□□□ -0.46
MTHFD1-204ENST00000553405 TBX15Q96SF7 602 aa12.19□□□□□ -0.46
MTHFD1-204ENST00000553405 FAAP24Q9BTP7 215 aa12.19□□□□□ -0.46
MTHFD1-204ENST00000553405 PECRQ9BY49 303 aa12.19□□□□□ -0.46
MTHFD1-204ENST00000553405 SLIRPQ9GZT3 109 aaKnown RBP12.19□□□□□ -0.46
MTHFD1-204ENST00000553405 NXF2Q9GZY0 626 aaKnown RBP12.19□□□□□ -0.46
MTHFD1-204ENST00000553405 ABCG5Q9H222 651 aa12.19□□□□□ -0.46
MTHFD1-204ENST00000553405 LINC00574Q9H8X3 128 aa12.19□□□□□ -0.46
MTHFD1-204ENST00000553405 UNKLQ9H9P5 680 aaKnown RBP12.19□□□□□ -0.46
MTHFD1-204ENST00000553405 RSL24D1Q9UHA3 163 aaKnown RBP12.19□□□□□ -0.46
MTHFD1-204ENST00000553405 KPTNQ9Y664 436 aa12.19□□□□□ -0.46
MTHFD1-204ENST00000553405 LINC00312Q9Y6C7 94 aa12.19□□□□□ -0.46
MTHFD1-204ENST00000553405 C17orf98A8MV24 154 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms