RNA–Protein interactions for RNA: ENST00000551706.1

CDK4-208, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best)

Gene CDK4, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-208ENST00000551706 TPRX1Q8N7U7 411 aa14.18□□□□□ -0.14
CDK4-208ENST00000551706 SIGLECL1Q8N7X8 197 aa14.18□□□□□ -0.14
CDK4-208ENST00000551706 NCOR1P1Q9H4R4 102 aa14.18□□□□□ -0.14
CDK4-208ENST00000551706 OR6C3Q9NZP0 311 aa14.18□□□□□ -0.14
CDK4-208ENST00000551706 ODAMA1E959 279 aa14.17□□□□□ -0.14
CDK4-208ENST00000551706 FAM90A10PA6NDY2 464 aa14.17□□□□□ -0.14
CDK4-208ENST00000551706 FAM90A18PA6NE21 464 aa14.17□□□□□ -0.14
CDK4-208ENST00000551706 FAM90A16PA6NEW6 464 aa14.17□□□□□ -0.14
CDK4-208ENST00000551706 FAM90A20PA6NIJ5 464 aa14.17□□□□□ -0.14
CDK4-208ENST00000551706 FAM90A8PA6NJQ4 464 aa14.17□□□□□ -0.14
CDK4-208ENST00000551706 FAM90A7PA6NKC0 464 aa14.17□□□□□ -0.14
CDK4-208ENST00000551706 FAM90A22PA8MWA6 464 aa14.17□□□□□ -0.14
CDK4-208ENST00000551706 FAM90A12PA8MX19 464 aa14.17□□□□□ -0.14
CDK4-208ENST00000551706 FAM90A5PA8MXJ8 464 aa14.17□□□□□ -0.14
CDK4-208ENST00000551706 FAM90A23PA8MXZ1 464 aa14.17□□□□□ -0.14
CDK4-208ENST00000551706 HSPB6O14558 160 aa14.17□□□□□ -0.14
CDK4-208ENST00000551706 PDCD5O14737 125 aa14.17□□□□□ -0.14
CDK4-208ENST00000551706 FAM90A15PP0C7V4 464 aa14.17□□□□□ -0.14
CDK4-208ENST00000551706 FAM90A13PP0C7W8 464 aa14.17□□□□□ -0.14
CDK4-208ENST00000551706 FAM90A14PP0C7W9 464 aa14.17□□□□□ -0.14
CDK4-208ENST00000551706 FAM90A24PP0C7X0 464 aa14.17□□□□□ -0.14
CDK4-208ENST00000551706 MGMTP16455 207 aa14.17□□□□□ -0.14
CDK4-208ENST00000551706 MYL9P24844 172 aa14.17□□□□□ -0.14
CDK4-208ENST00000551706 ATXN7L3Q14CW9 347 aaPredicted RBP14.17□□□□□ -0.14
CDK4-208ENST00000551706 NEDD8Q15843 81 aa14.17□□□□□ -0.14
CDK4-208ENST00000551706 TAF9Q16594 264 aa14.17□□□□□ -0.14
CDK4-208ENST00000551706 RUSC1-AS1Q66K80 236 aa14.17□□□□□ -0.14
CDK4-208ENST00000551706 TCF23Q7RTU1 214 aa14.17□□□□□ -0.14
CDK4-208ENST00000551706 PDZD9Q8IXQ8 264 aa14.17□□□□□ -0.14
CDK4-208ENST00000551706 C11orf42Q8N5U0 333 aa14.17□□□□□ -0.14
CDK4-208ENST00000551706 SUMF2Q8NBJ7 301 aa14.17□□□□□ -0.14
CDK4-208ENST00000551706 TSPAN14Q8NG11 270 aa14.17□□□□□ -0.14
CDK4-208ENST00000551706 ZFAND2BQ8WV99 257 aa14.17□□□□□ -0.14
CDK4-208ENST00000551706 CORO2AQ92828 525 aa14.17□□□□□ -0.14
CDK4-208ENST00000551706 DPCDQ9BVM2 203 aaPredicted RBP14.17□□□□□ -0.14
CDK4-208ENST00000551706 SELENOIQ9C0D9 397 aa14.17□□□□□ -0.14
CDK4-208ENST00000551706 GAL3ST2Q9H3Q3 398 aa14.17□□□□□ -0.14
CDK4-208ENST00000551706 PLGRKTQ9HBL7 147 aa14.17□□□□□ -0.14
CDK4-208ENST00000551706 STUB1Q9UNE7 303 aa14.17□□□□□ -0.14
CDK4-208ENST00000551706 AK6Q9Y3D8 172 aaKnown RBP14.17□□□□□ -0.14
CDK4-208ENST00000551706 SLC17A2O00624 439 aa14.16□□□□□ -0.14
CDK4-208ENST00000551706 NPFFO15130 113 aa14.16□□□□□ -0.14
CDK4-208ENST00000551706 VENTXO95231 258 aa14.16□□□□□ -0.14
CDK4-208ENST00000551706 BPNT1O95861 308 aa14.16□□□□□ -0.14
CDK4-208ENST00000551706 FGF9P31371 208 aaPredicted RBP14.16□□□□□ -0.14
CDK4-208ENST00000551706 GLIPR1P48060 266 aa14.16□□□□□ -0.14
CDK4-208ENST00000551706 COMPP49747 757 aaPredicted RBP14.16□□□□□ -0.14
CDK4-208ENST00000551706 KCNG3Q8TAE7 436 aa14.16□□□□□ -0.14
CDK4-208ENST00000551706 ZDHHC16Q969W1 377 aa14.16□□□□□ -0.14
CDK4-208ENST00000551706 COQ2Q96H96 371 aa14.16□□□□□ -0.14
CDK4-208ENST00000551706 ZNF48Q96MX3 618 aaPredicted RBP14.16□□□□□ -0.14
CDK4-208ENST00000551706 PRDM13Q9H4Q3 707 aa14.16□□□□□ -0.14
CDK4-208ENST00000551706 BANF2Q9H503 90 aa14.16□□□□□ -0.14
CDK4-208ENST00000551706 ZNF696Q9H7X3 374 aa14.16□□□□□ -0.14
CDK4-208ENST00000551706 ZMAT3Q9HA38 289 aaKnown RBP14.16□□□□□ -0.14
CDK4-208ENST00000551706 TAS2R3Q9NYW6 316 aa14.16□□□□□ -0.14
CDK4-208ENST00000551706 V9GY05 133 aa14.16□□□□□ -0.14
CDK4-208ENST00000551706 TRIM77I1YAP6 450 aa14.15□□□□□ -0.14
CDK4-208ENST00000551706 CLPXO76031 633 aa14.15□□□□□ -0.14
CDK4-208ENST00000551706 IGHV1-8P0DP01 117 aa14.15□□□□□ -0.14
CDK4-208ENST00000551706 DLX1P56177 255 aa14.15□□□□□ -0.14
CDK4-208ENST00000551706 BAMBIQ13145 260 aa14.15□□□□□ -0.14
CDK4-208ENST00000551706 KLRD1Q13241 179 aa14.15□□□□□ -0.14
CDK4-208ENST00000551706 RBM39Q14498 530 aaKnown RBP14.15□□□□□ -0.14
CDK4-208ENST00000551706 RAB11BQ15907 218 aa14.15□□□□□ -0.14
CDK4-208ENST00000551706 DEFB112Q30KQ8 113 aa14.15□□□□□ -0.14
CDK4-208ENST00000551706 MIDNQ504T8 468 aa14.15□□□□□ -0.14
CDK4-208ENST00000551706 ATAD3CQ5T2N8 411 aa14.15□□□□□ -0.14
CDK4-208ENST00000551706 PIP4P2Q8N4L2 257 aa14.15□□□□□ -0.14
CDK4-208ENST00000551706 ZNF565Q8N9K5 539 aa14.15□□□□□ -0.14
CDK4-208ENST00000551706 TMEM104Q8NE00 496 aa14.15□□□□□ -0.14
CDK4-208ENST00000551706 OR13D1Q8NGV5 346 aa14.15□□□□□ -0.14
CDK4-208ENST00000551706 FAM46BQ96A09 425 aa14.15□□□□□ -0.14
CDK4-208ENST00000551706 Q96M66 194 aa14.15□□□□□ -0.14
CDK4-208ENST00000551706 RCC2Q9P258 522 aaKnown RBP14.15□□□□□ -0.14
CDK4-208ENST00000551706 SSR3Q9UNL2 185 aa14.15□□□□□ -0.14
CDK4-208ENST00000551706 FAM96BQ9Y3D0 163 aa14.15□□□□□ -0.14
CDK4-208ENST00000551706 MEIKINA0A087WXM9 373 aa14.14□□□□□ -0.15
CDK4-208ENST00000551706 MEX3AA1L020 520 aaKnown RBP14.14□□□□□ -0.15
CDK4-208ENST00000551706 MCRIP1C9JLW8 97 aa14.14□□□□□ -0.15
CDK4-208ENST00000551706 MPIG6BO95866 241 aa14.14□□□□□ -0.15
CDK4-208ENST00000551706 GLAP06280 429 aa14.14□□□□□ -0.15
CDK4-208ENST00000551706 VSIG8P0DPA2 414 aa14.14□□□□□ -0.15
CDK4-208ENST00000551706 ARSBP15848 533 aa14.14□□□□□ -0.15
CDK4-208ENST00000551706 ACTG1P63261 375 aa14.14□□□□□ -0.15
CDK4-208ENST00000551706 PRB3Q04118 309 aaPredicted RBP14.14□□□□□ -0.15
CDK4-208ENST00000551706 C22orf42Q6IC83 251 aa14.14□□□□□ -0.15
CDK4-208ENST00000551706 SLC35E4Q6ICL7 350 aa14.14□□□□□ -0.15
CDK4-208ENST00000551706 HCP5Q6MZN7 132 aa14.14□□□□□ -0.15
CDK4-208ENST00000551706 NEK7Q8TDX7 302 aa14.14□□□□□ -0.15
CDK4-208ENST00000551706 SLC25A28Q96A46 364 aa14.14□□□□□ -0.15
CDK4-208ENST00000551706 GFI1Q99684 422 aa14.14□□□□□ -0.15
CDK4-208ENST00000551706 TMEM59Q9BXS4 323 aa14.14□□□□□ -0.15
CDK4-208ENST00000551706 ING3Q9NXR8 418 aa14.14□□□□□ -0.15
CDK4-208ENST00000551706 SOX21Q9Y651 276 aaPredicted RBP14.14□□□□□ -0.15
CDK4-208ENST00000551706 SESN1Q9Y6P5 492 aa14.14□□□□□ -0.15
CDK4-208ENST00000551706 TRRAPQ9Y4A5 3859 aa14.14□□□□□ -0.15
CDK4-208ENST00000551706 A0A0U1RQK1 487 aa14.13□□□□□ -0.15
CDK4-208ENST00000551706 TMEM30CPA0ZSE6 113 aa14.13□□□□□ -0.15
CDK4-208ENST00000551706 MEIOCA2RUB1 952 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms