RNA–Protein interactions for RNA: ENST00000551425.1

PTCH1-222, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 241 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-222ENST00000551425 KBTBD11-OT1A0A1B0GTJ5 212 aa9.19□□□□□ -0.94
PTCH1-222ENST00000551425 A6NIN4 97 aa9.19□□□□□ -0.94
PTCH1-222ENST00000551425 ZNF254O75437 659 aa9.19□□□□□ -0.94
PTCH1-222ENST00000551425 INMTO95050 263 aa9.19□□□□□ -0.94
PTCH1-222ENST00000551425 CSN2P05814 226 aa9.19□□□□□ -0.94
PTCH1-222ENST00000551425 RAP2AP10114 183 aa9.19□□□□□ -0.94
PTCH1-222ENST00000551425 NFYBP25208 207 aa9.19□□□□□ -0.94
PTCH1-222ENST00000551425 ZP1P60852 638 aa9.19□□□□□ -0.94
PTCH1-222ENST00000551425 ACTR3P61158 418 aa9.19□□□□□ -0.94
PTCH1-222ENST00000551425 ROM1Q03395 351 aa9.19□□□□□ -0.94
PTCH1-222ENST00000551425 MFGE8Q08431 387 aaPredicted RBP9.19□□□□□ -0.94
PTCH1-222ENST00000551425 FAM53AQ6NSI3 398 aaPredicted RBP9.19□□□□□ -0.94
PTCH1-222ENST00000551425 TMEM65Q6PI78 240 aa9.19□□□□□ -0.94
PTCH1-222ENST00000551425 CATSPERDQ86XM0 798 aa9.19□□□□□ -0.94
PTCH1-222ENST00000551425 ADGRG5Q8IZF4 528 aa9.19□□□□□ -0.94
PTCH1-222ENST00000551425 FAM58AQ8N1B3 248 aa9.19□□□□□ -0.94
PTCH1-222ENST00000551425 CANT1Q8WVQ1 401 aa9.19□□□□□ -0.94
PTCH1-222ENST00000551425 ARPC1AQ92747 370 aa9.19□□□□□ -0.94
PTCH1-222ENST00000551425 OR5B12Q96R08 314 aa9.19□□□□□ -0.94
PTCH1-222ENST00000551425 HSPB9Q9BQS6 159 aa9.19□□□□□ -0.94
PTCH1-222ENST00000551425 RBFOX1Q9NWB1 397 aaKnown RBP9.19□□□□□ -0.94
PTCH1-222ENST00000551425 SIRPB1O00241 398 aa9.18□□□□□ -0.94
PTCH1-222ENST00000551425 PRODHO43272 600 aa9.18□□□□□ -0.94
PTCH1-222ENST00000551425 OR2H2O95918 312 aa9.18□□□□□ -0.94
PTCH1-222ENST00000551425 IGLV1-40P01703 118 aa9.18□□□□□ -0.94
PTCH1-222ENST00000551425 CGB3P0DN86 165 aa9.18□□□□□ -0.94
PTCH1-222ENST00000551425 CGB7P0DN87 165 aa9.18□□□□□ -0.94
PTCH1-222ENST00000551425 ARSBP15848 533 aa9.18□□□□□ -0.94
PTCH1-222ENST00000551425 PPIFP30405 207 aaKnown RBP9.18□□□□□ -0.94
PTCH1-222ENST00000551425 MAGEA2P43356 314 aa9.18□□□□□ -0.94
PTCH1-222ENST00000551425 NPBWR2P48146 333 aa9.18□□□□□ -0.94
PTCH1-222ENST00000551425 FUT6P51993 359 aa9.18□□□□□ -0.94
PTCH1-222ENST00000551425 HCCSP53701 268 aa9.18□□□□□ -0.94
PTCH1-222ENST00000551425 SLURP1P55000 103 aa9.18□□□□□ -0.94
PTCH1-222ENST00000551425 ZNF816Q0VGE8 651 aaPredicted RBP9.18□□□□□ -0.94
PTCH1-222ENST00000551425 ZNF679Q8IYX0 411 aa9.18□□□□□ -0.94
PTCH1-222ENST00000551425 AQP11Q8NBQ7 271 aa9.18□□□□□ -0.94
PTCH1-222ENST00000551425 OR2T10Q8NGZ9 312 aa9.18□□□□□ -0.94
PTCH1-222ENST00000551425 OR4C12Q96R67 309 aa9.18□□□□□ -0.94
PTCH1-222ENST00000551425 S1PR3Q99500 378 aa9.18□□□□□ -0.94
PTCH1-222ENST00000551425 RASL11BQ9BPW5 248 aa9.18□□□□□ -0.94
PTCH1-222ENST00000551425 YIPF3Q9GZM5 350 aa9.18□□□□□ -0.94
PTCH1-222ENST00000551425 LINC00574Q9H8X3 128 aa9.18□□□□□ -0.94
PTCH1-222ENST00000551425 KIAA1456Q9P272 454 aa9.18□□□□□ -0.94
PTCH1-222ENST00000551425 PSG11Q9UQ72 335 aa9.18□□□□□ -0.94
PTCH1-222ENST00000551425 IGHV1-3A0A0C4DH29 117 aa9.17□□□□□ -0.94
PTCH1-222ENST00000551425 PRR32B1ATL7 298 aa9.17□□□□□ -0.94
PTCH1-222ENST00000551425 ANKRD65E5RJM6 399 aa9.17□□□□□ -0.94
PTCH1-222ENST00000551425 LINC01619G3V211 115 aa9.17□□□□□ -0.94
PTCH1-222ENST00000551425 TNFRSF11BO00300 401 aa9.17□□□□□ -0.94
PTCH1-222ENST00000551425 HSD17B6O14756 317 aa9.17□□□□□ -0.94
PTCH1-222ENST00000551425 SH2D1BO14796 132 aa9.17□□□□□ -0.94
PTCH1-222ENST00000551425 SRSF10O75494 262 aaKnown RBP9.17□□□□□ -0.94
PTCH1-222ENST00000551425 CCNB2O95067 398 aa9.17□□□□□ -0.94
PTCH1-222ENST00000551425 IGLV1-51P01701 117 aa9.17□□□□□ -0.94
PTCH1-222ENST00000551425 PRKACAP17612 351 aa9.17□□□□□ -0.94
PTCH1-222ENST00000551425 SOX6P35712 828 aa9.17□□□□□ -0.94
PTCH1-222ENST00000551425 UBE2V2Q15819 145 aa9.17□□□□□ -0.94
PTCH1-222ENST00000551425 MOB3BQ86TA1 216 aa9.17□□□□□ -0.94
PTCH1-222ENST00000551425 ELMOD2Q8IZ81 293 aa9.17□□□□□ -0.94
PTCH1-222ENST00000551425 OR8H1Q8NGG4 311 aa9.17□□□□□ -0.94
PTCH1-222ENST00000551425 LEAP2Q969E1 77 aa9.17□□□□□ -0.94
PTCH1-222ENST00000551425 COQ2Q96H96 371 aa9.17□□□□□ -0.94
PTCH1-222ENST00000551425 HIPK2Q9H2X6 1198 aa9.17□□□□□ -0.94
PTCH1-222ENST00000551425 MOB1AQ9H8S9 216 aa9.17□□□□□ -0.94
PTCH1-222ENST00000551425 RETNQ9HD89 108 aa9.17□□□□□ -0.94
PTCH1-222ENST00000551425 HMG20AQ9NP66 347 aa9.17□□□□□ -0.94
PTCH1-222ENST00000551425 EXOSC4Q9NPD3 245 aaKnown RBP9.17□□□□□ -0.94
PTCH1-222ENST00000551425 TPSG1Q9NRR2 321 aa9.17□□□□□ -0.94
PTCH1-222ENST00000551425 KRT84Q9NSB2 600 aa9.17□□□□□ -0.94
PTCH1-222ENST00000551425 OR6C3Q9NZP0 311 aa9.17□□□□□ -0.94
PTCH1-222ENST00000551425 IGHV3-72A0A0B4J1Y9 119 aa9.16□□□□□ -0.94
PTCH1-222ENST00000551425 FAM90A10PA6NDY2 464 aa9.16□□□□□ -0.94
PTCH1-222ENST00000551425 C12orf77C9JDV5 145 aa9.16□□□□□ -0.94
PTCH1-222ENST00000551425 LOC110117498-PIK3R3F6TDL0 507 aa9.16□□□□□ -0.94
PTCH1-222ENST00000551425 FKBP6O75344 327 aa9.16□□□□□ -0.94
PTCH1-222ENST00000551425 MOSP00540 346 aa9.16□□□□□ -0.94
PTCH1-222ENST00000551425 IGHV3-7P01780 117 aa9.16□□□□□ -0.94
PTCH1-222ENST00000551425 GAPDHP04406 335 aaKnown RBP9.16□□□□□ -0.94
PTCH1-222ENST00000551425 BCL3P20749 454 aa9.16□□□□□ -0.94
PTCH1-222ENST00000551425 CCL1P22362 96 aa9.16□□□□□ -0.94
PTCH1-222ENST00000551425 RAB9AP51151 201 aa9.16□□□□□ -0.94
PTCH1-222ENST00000551425 RIDAP52758 137 aaKnown RBP9.16□□□□□ -0.94
PTCH1-222ENST00000551425 PITPNAQ00169 270 aa9.16□□□□□ -0.94
PTCH1-222ENST00000551425 GALEQ14376 348 aa9.16□□□□□ -0.94
PTCH1-222ENST00000551425 KRBOX4Q5JUW0 171 aa9.16□□□□□ -0.94
PTCH1-222ENST00000551425 SLC35D3Q5M8T2 416 aa9.16□□□□□ -0.94
PTCH1-222ENST00000551425 BCL2L15Q5TBC7 163 aa9.16□□□□□ -0.94
PTCH1-222ENST00000551425 RNLSQ5VYX0 342 aa9.16□□□□□ -0.94
PTCH1-222ENST00000551425 ZFP1Q6P2D0 407 aa9.16□□□□□ -0.94
PTCH1-222ENST00000551425 SLC16A12Q6ZSM3 486 aa9.16□□□□□ -0.94
PTCH1-222ENST00000551425 IQCF1Q8N6M8 205 aa9.16□□□□□ -0.94
PTCH1-222ENST00000551425 ASB17Q8WXJ9 295 aa9.16□□□□□ -0.94
PTCH1-222ENST00000551425 RNF166Q96A37 237 aaPredicted RBP9.16□□□□□ -0.94
PTCH1-222ENST00000551425 MNTQ99583 582 aa9.16□□□□□ -0.94
PTCH1-222ENST00000551425 DGCR6LQ9BY27 220 aa9.16□□□□□ -0.94
PTCH1-222ENST00000551425 TOLLIPQ9H0E2 274 aa9.16□□□□□ -0.94
PTCH1-222ENST00000551425 ALX4Q9H161 411 aaPredicted RBP9.16□□□□□ -0.94
PTCH1-222ENST00000551425 STUB1Q9UNE7 303 aa9.16□□□□□ -0.94
PTCH1-222ENST00000551425 MRPS28Q9Y2Q9 187 aaKnown RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms