RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 TOMM40LQ969M1 308 aa16.6■□□□□ 0.25
SSH1-209ENST00000551165 FAM122AQ96E09 287 aa16.6■□□□□ 0.25
SSH1-209ENST00000551165 OR2A7Q96R45 310 aa16.6■□□□□ 0.25
SSH1-209ENST00000551165 TMEM165Q9HC07 324 aa16.6■□□□□ 0.25
SSH1-209ENST00000551165 METRNQ9UJH8 293 aa16.6■□□□□ 0.25
SSH1-209ENST00000551165 MGAT4AQ9UM21 535 aa16.6■□□□□ 0.25
SSH1-209ENST00000551165 IGKV1-6A0A0C4DH72 117 aa16.6■□□□□ 0.25
SSH1-209ENST00000551165 PLSCR5A0PG75 271 aa16.6■□□□□ 0.25
SSH1-209ENST00000551165 HAND1O96004 215 aa16.6■□□□□ 0.25
SSH1-209ENST00000551165 ACAA1P09110 424 aaPredicted RBP16.6■□□□□ 0.25
SSH1-209ENST00000551165 SLC9A3R2Q15599 337 aa16.6■□□□□ 0.25
SSH1-209ENST00000551165 TMEM185AQ8NFB2 350 aa16.6■□□□□ 0.25
SSH1-209ENST00000551165 LRRC29Q8WV35 223 aa16.6■□□□□ 0.25
SSH1-209ENST00000551165 MRPL24Q96A35 216 aaKnown RBP16.6■□□□□ 0.25
SSH1-209ENST00000551165 FXYD6Q9H0Q3 95 aa16.6■□□□□ 0.25
SSH1-209ENST00000551165 CACNA1DQ01668 2161 aa16.6■□□□□ 0.25
SSH1-209ENST00000551165 DIDO1Q9BTC0 2240 aaKnown RBP16.6■□□□□ 0.25
SSH1-209ENST00000551165 CD200P41217 278 aa16.59■□□□□ 0.25
SSH1-209ENST00000551165 DHODHQ02127 395 aa16.59■□□□□ 0.25
SSH1-209ENST00000551165 MITD1Q8WV92 249 aa16.59■□□□□ 0.25
SSH1-209ENST00000551165 SH2D1BO14796 132 aa16.59■□□□□ 0.25
SSH1-209ENST00000551165 TPD52L2O43399 206 aaKnown RBP16.59■□□□□ 0.25
SSH1-209ENST00000551165 RPS2P15880 293 aaKnown RBP16.59■□□□□ 0.25
SSH1-209ENST00000551165 DNASE1P24855 282 aa16.59■□□□□ 0.25
SSH1-209ENST00000551165 SEC61A1P61619 476 aaKnown RBP16.59■□□□□ 0.25
SSH1-209ENST00000551165 TMEM128Q5BJH2 165 aa16.59■□□□□ 0.25
SSH1-209ENST00000551165 C11orf88Q6PI97 169 aa16.59■□□□□ 0.25
SSH1-209ENST00000551165 CLEC18BQ6UXF7 455 aa16.59■□□□□ 0.25
SSH1-209ENST00000551165 KCTD9Q7L273 389 aa16.59■□□□□ 0.25
SSH1-209ENST00000551165 NUP37Q8NFH4 326 aa16.59■□□□□ 0.25
SSH1-209ENST00000551165 LINC01560Q8TB33 94 aa16.59■□□□□ 0.25
SSH1-209ENST00000551165 ITLN1Q8WWA0 313 aa16.59■□□□□ 0.25
SSH1-209ENST00000551165 NEUROG1Q92886 237 aa16.59■□□□□ 0.25
SSH1-209ENST00000551165 MEGF10Q96KG7 1140 aa16.59■□□□□ 0.25
SSH1-209ENST00000551165 DECR2Q9NUI1 292 aa16.59■□□□□ 0.25
SSH1-209ENST00000551165 ATP23Q9Y6H3 246 aa16.59■□□□□ 0.25
SSH1-209ENST00000551165 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.58■□□□□ 0.25
SSH1-209ENST00000551165 BET1O15155 118 aa16.58■□□□□ 0.25
SSH1-209ENST00000551165 GIPP09681 153 aaPredicted RBP16.58■□□□□ 0.25
SSH1-209ENST00000551165 AADACP22760 399 aa16.58■□□□□ 0.25
SSH1-209ENST00000551165 ASCL1P50553 236 aa16.58■□□□□ 0.25
SSH1-209ENST00000551165 RPS23P62266 143 aaKnown RBP16.58■□□□□ 0.25
SSH1-209ENST00000551165 ADIPOQQ15848 244 aa16.58■□□□□ 0.25
SSH1-209ENST00000551165 FAHD2BQ6P2I3 314 aaPredicted RBP16.58■□□□□ 0.25
SSH1-209ENST00000551165 MOGAT3Q86VF5 341 aa16.58■□□□□ 0.25
SSH1-209ENST00000551165 ZCCHC24Q8N2G6 241 aaKnown RBP16.58■□□□□ 0.25
SSH1-209ENST00000551165 BOLLQ8N9W6 283 aaKnown RBP16.58■□□□□ 0.25
SSH1-209ENST00000551165 UBALD1Q8TB05 177 aa16.58■□□□□ 0.25
SSH1-209ENST00000551165 ZFAND1Q8TCF1 268 aa16.58■□□□□ 0.25
SSH1-209ENST00000551165 FAHD2AQ96GK7 314 aa16.58■□□□□ 0.25
SSH1-209ENST00000551165 HYLS1Q96M11 299 aa16.58■□□□□ 0.25
SSH1-209ENST00000551165 TREM2Q9NZC2 230 aa16.58■□□□□ 0.25
SSH1-209ENST00000551165 OPN4Q9UHM6 478 aa16.58■□□□□ 0.25
SSH1-209ENST00000551165 RFPL4AA6NLU0 287 aa16.58■□□□□ 0.24
SSH1-209ENST00000551165 RFPL4AL1F8VTS6 287 aa16.58■□□□□ 0.24
SSH1-209ENST00000551165 ZNF81P51508 661 aa16.58■□□□□ 0.24
SSH1-209ENST00000551165 RBM39Q14498 530 aaKnown RBP16.58■□□□□ 0.24
SSH1-209ENST00000551165 SPIN3Q5JUX0 258 aa16.58■□□□□ 0.24
SSH1-209ENST00000551165 Q6ZS49 121 aa16.58■□□□□ 0.24
SSH1-209ENST00000551165 C9orf62Q8N4C0 152 aa16.58■□□□□ 0.24
SSH1-209ENST00000551165 ACACBO00763 2458 aa16.57■□□□□ 0.24
SSH1-209ENST00000551165 IGHV1-46P01743 117 aa16.57■□□□□ 0.24
SSH1-209ENST00000551165 CHRNB4P30926 498 aa16.57■□□□□ 0.24
SSH1-209ENST00000551165 C1QTNF12Q5T7M4 302 aa16.57■□□□□ 0.24
SSH1-209ENST00000551165 TGIF2LYQ8IUE0 185 aa16.57■□□□□ 0.24
SSH1-209ENST00000551165 RANBP3Q9H6Z4 567 aaPredicted RBP16.57■□□□□ 0.24
SSH1-209ENST00000551165 HSPB11Q9Y547 144 aa16.57■□□□□ 0.24
SSH1-209ENST00000551165 TRDCB7Z8K6 153 aa16.57■□□□□ 0.24
SSH1-209ENST00000551165 DUS4LO95620 317 aaKnown RBP16.57■□□□□ 0.24
SSH1-209ENST00000551165 OR4A8P0C604 315 aa16.57■□□□□ 0.24
SSH1-209ENST00000551165 PPP3CBP16298 524 aa16.57■□□□□ 0.24
SSH1-209ENST00000551165 TAS2R31P59538 309 aa16.57■□□□□ 0.24
SSH1-209ENST00000551165 ANKRD55Q3KP44 614 aa16.57■□□□□ 0.24
SSH1-209ENST00000551165 FAM201AQ5SY85 155 aa16.57■□□□□ 0.24
SSH1-209ENST00000551165 TMEM246Q9BRR3 403 aa16.57■□□□□ 0.24
SSH1-209ENST00000551165 IGHV3OR15-7A0A075B7D8 119 aa16.56■□□□□ 0.24
SSH1-209ENST00000551165 SFT2D2O95562 160 aa16.56■□□□□ 0.24
SSH1-209ENST00000551165 GLAP06280 429 aa16.56■□□□□ 0.24
SSH1-209ENST00000551165 ZNF880Q6PDB4 577 aa16.56■□□□□ 0.24
SSH1-209ENST00000551165 ZNF497Q6ZNH5 498 aa16.56■□□□□ 0.24
SSH1-209ENST00000551165 DMRTC2Q8IXT2 367 aaPredicted RBP16.56■□□□□ 0.24
SSH1-209ENST00000551165 GCSAMQ8N6F7 178 aa16.56■□□□□ 0.24
SSH1-209ENST00000551165 SEC22AQ96IW7 307 aa16.56■□□□□ 0.24
SSH1-209ENST00000551165 TRAF4Q9BUZ4 470 aaPredicted RBP16.56■□□□□ 0.24
SSH1-209ENST00000551165 KIAA2026Q5HYC2 2103 aa16.56■□□□□ 0.24
SSH1-209ENST00000551165 SURF2Q15527 256 aaPredicted RBP16.56■□□□□ 0.24
SSH1-209ENST00000551165 CD177Q8N6Q3 437 aa16.56■□□□□ 0.24
SSH1-209ENST00000551165 SCGB3A2Q96PL1 93 aa16.56■□□□□ 0.24
SSH1-209ENST00000551165 PHB2Q99623 299 aa16.56■□□□□ 0.24
SSH1-209ENST00000551165 PKDREJQ9NTG1 2253 aa16.55■□□□□ 0.24
SSH1-209ENST00000551165 ZNF728P0DKX0 622 aa16.55■□□□□ 0.24
SSH1-209ENST00000551165 SFTPCP11686 197 aa16.55■□□□□ 0.24
SSH1-209ENST00000551165 PLA2G5P39877 138 aa16.55■□□□□ 0.24
SSH1-209ENST00000551165 SELENOVP59797 346 aa16.55■□□□□ 0.24
SSH1-209ENST00000551165 RAP2BP61225 183 aa16.55■□□□□ 0.24
SSH1-209ENST00000551165 SRSF7Q16629 238 aaKnown RBP eCLIP16.55■□□□□ 0.24
SSH1-209ENST00000551165 OR5M8Q8NGP6 311 aa16.55■□□□□ 0.24
SSH1-209ENST00000551165 OR11L1Q8NGX0 322 aa16.55■□□□□ 0.24
SSH1-209ENST00000551165 PLPPR2Q96GM1 343 aa16.55■□□□□ 0.24
SSH1-209ENST00000551165 C14orf166Q9Y224 244 aaKnown RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms