RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 PFN2P35080 140 aa2.87□□□□□ -1.95
LIMA1-205ENST00000550592 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.87□□□□□ -1.95
LIMA1-205ENST00000550592 KHDRBS2Q5VWX1 349 aaKnown RBP2.87□□□□□ -1.95
LIMA1-205ENST00000550592 KCTD16Q68DU8 428 aa2.87□□□□□ -1.95
LIMA1-205ENST00000550592 CLEC20AQ6ZU45 233 aa2.87□□□□□ -1.95
LIMA1-205ENST00000550592 SLC16A13Q7RTY0 426 aa2.87□□□□□ -1.95
LIMA1-205ENST00000550592 C10orf67Q8IYJ2 551 aa2.87□□□□□ -1.95
LIMA1-205ENST00000550592 ARRDC1Q8N5I2 433 aa2.87□□□□□ -1.95
LIMA1-205ENST00000550592 OR4K5Q8NGD3 323 aa2.87□□□□□ -1.95
LIMA1-205ENST00000550592 PATE1Q8WXA2 126 aa2.87□□□□□ -1.95
LIMA1-205ENST00000550592 GPR21Q99679 349 aa2.87□□□□□ -1.95
LIMA1-205ENST00000550592 SAMD10Q9BYL1 202 aa2.87□□□□□ -1.95
LIMA1-205ENST00000550592 REG4Q9BYZ8 158 aa2.87□□□□□ -1.95
LIMA1-205ENST00000550592 TMEM27Q9HBJ8 222 aa2.87□□□□□ -1.95
LIMA1-205ENST00000550592 ZNF282Q9UDV7 671 aaPredicted RBP2.87□□□□□ -1.95
LIMA1-205ENST00000550592 PCLOQ9Y6V0 5065 aa2.87□□□□□ -1.95
LIMA1-205ENST00000550592 CCDC88CQ9P219 2028 aa2.86□□□□□ -1.95
LIMA1-205ENST00000550592 GOLGA6L4A6NEF3 574 aa2.86□□□□□ -1.95
LIMA1-205ENST00000550592 H0YC42 278 aa2.86□□□□□ -1.95
LIMA1-205ENST00000550592 GABRPO00591 440 aa2.86□□□□□ -1.95
LIMA1-205ENST00000550592 PLPP1O14494 284 aa2.86□□□□□ -1.95
LIMA1-205ENST00000550592 XRCC2O43543 280 aa2.86□□□□□ -1.95
LIMA1-205ENST00000550592 DEXIO95424 95 aa2.86□□□□□ -1.95
LIMA1-205ENST00000550592 HLA-DQA1P01909 254 aa2.86□□□□□ -1.95
LIMA1-205ENST00000550592 IVLP07476 585 aa2.86□□□□□ -1.95
LIMA1-205ENST00000550592 KRT16P08779 473 aa2.86□□□□□ -1.95
LIMA1-205ENST00000550592 RPSAP08865 295 aaKnown RBP2.86□□□□□ -1.95
LIMA1-205ENST00000550592 OR8U9P0C7N5 309 aa2.86□□□□□ -1.95
LIMA1-205ENST00000550592 MUC1P15941 1255 aaPredicted RBP2.86□□□□□ -1.95
LIMA1-205ENST00000550592 ACTR1BP42025 376 aa2.86□□□□□ -1.95
LIMA1-205ENST00000550592 GPR1P46091 355 aa2.86□□□□□ -1.95
LIMA1-205ENST00000550592 GFERP55789 205 aa2.86□□□□□ -1.95
LIMA1-205ENST00000550592 ACTG1P63261 375 aa2.86□□□□□ -1.95
LIMA1-205ENST00000550592 SNRNP35Q16560 246 aaKnown RBP2.86□□□□□ -1.95
LIMA1-205ENST00000550592 SLC25A35Q3KQZ1 300 aa2.86□□□□□ -1.95
LIMA1-205ENST00000550592 ABCA11PQ4W5N1 156 aa2.86□□□□□ -1.95
LIMA1-205ENST00000550592 HIKESHIQ53FT3 197 aa2.86□□□□□ -1.95
LIMA1-205ENST00000550592 ADNP2Q6IQ32 1131 aa2.86□□□□□ -1.95
LIMA1-205ENST00000550592 SNX20Q7Z614 316 aa2.86□□□□□ -1.95
LIMA1-205ENST00000550592 NKAIN4Q8IVV8 208 aa2.86□□□□□ -1.95
LIMA1-205ENST00000550592 INO80EQ8NBZ0 244 aaPredicted RBP2.86□□□□□ -1.95
LIMA1-205ENST00000550592 OR10W1Q8NGF6 305 aa2.86□□□□□ -1.95
LIMA1-205ENST00000550592 OR5AR1Q8NGP9 310 aa2.86□□□□□ -1.95
LIMA1-205ENST00000550592 SYNPRQ8TBG9 265 aa2.86□□□□□ -1.95
LIMA1-205ENST00000550592 LRRC45Q96CN5 670 aa2.86□□□□□ -1.95
LIMA1-205ENST00000550592 CSPG4P5Q96PW8 444 aa2.86□□□□□ -1.95
LIMA1-205ENST00000550592 CCL19Q99731 98 aa2.86□□□□□ -1.95
LIMA1-205ENST00000550592 SPIN2AQ99865 258 aa2.86□□□□□ -1.95
LIMA1-205ENST00000550592 SPIN2BQ9BPZ2 258 aa2.86□□□□□ -1.95
LIMA1-205ENST00000550592 SLIRPQ9GZT3 109 aaKnown RBP2.86□□□□□ -1.95
LIMA1-205ENST00000550592 BLZF1Q9H2G9 400 aa2.86□□□□□ -1.95
LIMA1-205ENST00000550592 MYOZ1Q9NP98 299 aaPredicted RBP2.86□□□□□ -1.95
LIMA1-205ENST00000550592 ZC4H2Q9NQZ6 224 aa2.86□□□□□ -1.95
LIMA1-205ENST00000550592 HS3ST2Q9Y278 367 aa2.86□□□□□ -1.95
LIMA1-205ENST00000550592 V9GYY5 206 aaPredicted RBP2.86□□□□□ -1.95
LIMA1-205ENST00000550592 DNAJC13O75165 2243 aa2.86□□□□□ -1.95
LIMA1-205ENST00000550592 TENM1Q9UKZ4 2725 aa2.86□□□□□ -1.95
LIMA1-205ENST00000550592 DSCAMO60469 2012 aa2.86□□□□□ -1.95
LIMA1-205ENST00000550592 PRKDCP78527 4128 aaKnown RBP2.86□□□□□ -1.95
LIMA1-205ENST00000550592 RYR1P21817 5038 aa2.85□□□□□ -1.95
LIMA1-205ENST00000550592 IGHV1-69DA0A0B4J2H0 117 aa2.85□□□□□ -1.95
LIMA1-205ENST00000550592 LINC00854A0A1B0GVQ3 168 aa2.85□□□□□ -1.95
LIMA1-205ENST00000550592 ZNF99A8MXY4 864 aaPredicted RBP2.85□□□□□ -1.95
LIMA1-205ENST00000550592 ANKRD65E5RJM6 399 aa2.85□□□□□ -1.95
LIMA1-205ENST00000550592 RTL8CO15255 209 aa2.85□□□□□ -1.95
LIMA1-205ENST00000550592 SIVA1O15304 175 aa2.85□□□□□ -1.95
LIMA1-205ENST00000550592 KLF7O75840 302 aaPredicted RBP2.85□□□□□ -1.95
LIMA1-205ENST00000550592 SLC22A5O76082 557 aa2.85□□□□□ -1.95
LIMA1-205ENST00000550592 STATHP02808 62 aa2.85□□□□□ -1.95
LIMA1-205ENST00000550592 LINC00869P0C866 280 aa2.85□□□□□ -1.95
LIMA1-205ENST00000550592 RAB5AP20339 215 aa2.85□□□□□ -1.95
LIMA1-205ENST00000550592 TUBG1P23258 451 aa2.85□□□□□ -1.95
LIMA1-205ENST00000550592 BLVRAP53004 296 aa2.85□□□□□ -1.95
LIMA1-205ENST00000550592 DAOAP59103 153 aa2.85□□□□□ -1.95
LIMA1-205ENST00000550592 RPL23P62829 140 aaKnown RBP2.85□□□□□ -1.95
LIMA1-205ENST00000550592 TPM4P67936 248 aa2.85□□□□□ -1.95
LIMA1-205ENST00000550592 GTF2BQ00403 316 aa2.85□□□□□ -1.95
LIMA1-205ENST00000550592 DOC2AQ14183 400 aa2.85□□□□□ -1.95
LIMA1-205ENST00000550592 MPV17L2Q567V2 206 aa2.85□□□□□ -1.95
LIMA1-205ENST00000550592 MLIPQ5VWP3 458 aa2.85□□□□□ -1.95
LIMA1-205ENST00000550592 RWDD4Q6NW29 188 aaKnown RBP2.85□□□□□ -1.95
LIMA1-205ENST00000550592 UNC93AQ86WB7 457 aa2.85□□□□□ -1.95
LIMA1-205ENST00000550592 WDFY1Q8IWB7 410 aa2.85□□□□□ -1.95
LIMA1-205ENST00000550592 FAM57AQ8TBR7 257 aa2.85□□□□□ -1.95
LIMA1-205ENST00000550592 SUN5Q8TC36 379 aa2.85□□□□□ -1.95
LIMA1-205ENST00000550592 SLC37A2Q8TED4 501 aa2.85□□□□□ -1.95
LIMA1-205ENST00000550592 RAB1CQ92928 201 aa2.85□□□□□ -1.95
LIMA1-205ENST00000550592 HAUS1Q96CS2 278 aa2.85□□□□□ -1.95
LIMA1-205ENST00000550592 NEURL3Q96EH8 262 aa2.85□□□□□ -1.95
LIMA1-205ENST00000550592 ZNF514Q96K75 400 aaPredicted RBP2.85□□□□□ -1.95
LIMA1-205ENST00000550592 ZNF488Q96MN9 340 aa2.85□□□□□ -1.95
LIMA1-205ENST00000550592 UQCC2Q9BRT2 126 aa2.85□□□□□ -1.95
LIMA1-205ENST00000550592 WFDC1Q9HC57 220 aa2.85□□□□□ -1.95
LIMA1-205ENST00000550592 RPRD1BQ9NQG5 326 aaKnown RBP2.85□□□□□ -1.95
LIMA1-205ENST00000550592 TUBG2Q9NRH3 451 aa2.85□□□□□ -1.95
LIMA1-205ENST00000550592 RHBDD3Q9Y3P4 386 aa2.85□□□□□ -1.95
LIMA1-205ENST00000550592 MED12Q93074 2177 aa2.85□□□□□ -1.95
LIMA1-205ENST00000550592 TRRAPQ9Y4A5 3859 aa2.85□□□□□ -1.95
LIMA1-205ENST00000550592 ANK3Q12955 4377 aaKnown RBP2.84□□□□□ -1.95
LIMA1-205ENST00000550592 HYDINQ4G0P3 5121 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms