RNA–Protein interactions for RNA: ENST00000550075.5

CPSF6-205, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-205ENST00000550075 TRAV24A0A0B4J272 114 aa21.19■□□□□ 0.98
CPSF6-205ENST00000550075 MELTFP08582 738 aa21.19■□□□□ 0.98
CPSF6-205ENST00000550075 IGHV1-8P0DP01 117 aa21.19■□□□□ 0.98
CPSF6-205ENST00000550075 COX7A1P24310 79 aa21.19■□□□□ 0.98
CPSF6-205ENST00000550075 HCP5Q6MZN7 132 aa21.19■□□□□ 0.98
CPSF6-205ENST00000550075 LRRTM1Q86UE6 522 aa21.19■□□□□ 0.98
CPSF6-205ENST00000550075 LYPD6Q86Y78 171 aa21.19■□□□□ 0.98
CPSF6-205ENST00000550075 C1orf147Q96MC9 270 aaPredicted RBP21.19■□□□□ 0.98
CPSF6-205ENST00000550075 BARHL1Q9BZE3 327 aa21.19■□□□□ 0.98
CPSF6-205ENST00000550075 CST11Q9H112 138 aa21.19■□□□□ 0.98
CPSF6-205ENST00000550075 SPACA1Q9HBV2 294 aa21.19■□□□□ 0.98
CPSF6-205ENST00000550075 TAS2R3Q9NYW6 316 aa21.19■□□□□ 0.98
CPSF6-205ENST00000550075 STAB1Q9NY15 2570 aa21.18■□□□□ 0.98
CPSF6-205ENST00000550075 GEMIN2O14893 280 aaKnown RBP21.18■□□□□ 0.98
CPSF6-205ENST00000550075 RRP9O43818 475 aaKnown RBP21.18■□□□□ 0.98
CPSF6-205ENST00000550075 GLIPR1P48060 266 aa21.18■□□□□ 0.98
CPSF6-205ENST00000550075 GP2P55259 537 aaKnown RBP21.18■□□□□ 0.98
CPSF6-205ENST00000550075 LGALS4P56470 323 aa21.18■□□□□ 0.98
CPSF6-205ENST00000550075 TMEM91Q6ZNR0 172 aa21.18■□□□□ 0.98
CPSF6-205ENST00000550075 SPARTQ8N0X7 666 aa21.18■□□□□ 0.98
CPSF6-205ENST00000550075 PNKDQ8N490 385 aa21.18■□□□□ 0.98
CPSF6-205ENST00000550075 COQ2Q96H96 371 aa21.18■□□□□ 0.98
CPSF6-205ENST00000550075 DPCDQ9BVM2 203 aaPredicted RBP21.18■□□□□ 0.98
CPSF6-205ENST00000550075 NDUFB11Q9NX14 153 aa21.18■□□□□ 0.98
CPSF6-205ENST00000550075 ING3Q9NXR8 418 aa21.18■□□□□ 0.98
CPSF6-205ENST00000550075 SESN1Q9Y6P5 492 aa21.18■□□□□ 0.98
CPSF6-205ENST00000550075 BTBD17A6NE02 478 aa21.17■□□□□ 0.98
CPSF6-205ENST00000550075 CRTAPO75718 401 aaPredicted RBP21.17■□□□□ 0.98
CPSF6-205ENST00000550075 UBE2UQ5VVX9 321 aa21.17■□□□□ 0.98
CPSF6-205ENST00000550075 ZNF773Q6PK81 442 aa21.17■□□□□ 0.98
CPSF6-205ENST00000550075 SUMF2Q8NBJ7 301 aa21.17■□□□□ 0.98
CPSF6-205ENST00000550075 CORO2AQ92828 525 aa21.17■□□□□ 0.98
CPSF6-205ENST00000550075 DPAGT1Q9H3H5 408 aa21.17■□□□□ 0.98
CPSF6-205ENST00000550075 NCOR1P1Q9H4R4 102 aa21.17■□□□□ 0.98
CPSF6-205ENST00000550075 ZNRD1Q9P1U0 126 aa21.17■□□□□ 0.98
CPSF6-205ENST00000550075 A0A1W2PP11 408 aa21.16■□□□□ 0.98
CPSF6-205ENST00000550075 FAM90A10PA6NDY2 464 aa21.16■□□□□ 0.98
CPSF6-205ENST00000550075 FAM90A18PA6NE21 464 aa21.16■□□□□ 0.98
CPSF6-205ENST00000550075 FAM90A16PA6NEW6 464 aa21.16■□□□□ 0.98
CPSF6-205ENST00000550075 FAM90A20PA6NIJ5 464 aa21.16■□□□□ 0.98
CPSF6-205ENST00000550075 FAM90A8PA6NJQ4 464 aa21.16■□□□□ 0.98
CPSF6-205ENST00000550075 FAM90A7PA6NKC0 464 aa21.16■□□□□ 0.98
CPSF6-205ENST00000550075 FAM90A22PA8MWA6 464 aa21.16■□□□□ 0.98
CPSF6-205ENST00000550075 FAM90A12PA8MX19 464 aa21.16■□□□□ 0.98
CPSF6-205ENST00000550075 FAM90A5PA8MXJ8 464 aa21.16■□□□□ 0.98
CPSF6-205ENST00000550075 FAM90A23PA8MXZ1 464 aa21.16■□□□□ 0.98
CPSF6-205ENST00000550075 H3BUI4 141 aa21.16■□□□□ 0.98
CPSF6-205ENST00000550075 FAM90A15PP0C7V4 464 aa21.16■□□□□ 0.98
CPSF6-205ENST00000550075 FAM90A13PP0C7W8 464 aa21.16■□□□□ 0.98
CPSF6-205ENST00000550075 FAM90A14PP0C7W9 464 aa21.16■□□□□ 0.98
CPSF6-205ENST00000550075 FAM90A24PP0C7X0 464 aa21.16■□□□□ 0.98
CPSF6-205ENST00000550075 MGMTP16455 207 aa21.16■□□□□ 0.98
CPSF6-205ENST00000550075 PSMB9P28065 219 aa21.16■□□□□ 0.98
CPSF6-205ENST00000550075 RANBP1P43487 201 aa21.16■□□□□ 0.98
CPSF6-205ENST00000550075 FABP5Q01469 135 aa21.16■□□□□ 0.98
CPSF6-205ENST00000550075 PAX5Q02548 391 aa21.16■□□□□ 0.98
CPSF6-205ENST00000550075 SSX1Q16384 188 aa21.16■□□□□ 0.98
CPSF6-205ENST00000550075 KCTD21Q4G0X4 260 aa21.16■□□□□ 0.98
CPSF6-205ENST00000550075 C1orf100Q5SVJ3 147 aa21.16■□□□□ 0.98
CPSF6-205ENST00000550075 ATAD3CQ5T2N8 411 aa21.16■□□□□ 0.98
CPSF6-205ENST00000550075 OR52W1Q6IF63 320 aa21.16■□□□□ 0.98
CPSF6-205ENST00000550075 OR6M1Q8NGM8 313 aa21.16■□□□□ 0.98
CPSF6-205ENST00000550075 NEK7Q8TDX7 302 aa21.16■□□□□ 0.98
CPSF6-205ENST00000550075 GCDHQ92947 438 aaPredicted RBP21.16■□□□□ 0.98
CPSF6-205ENST00000550075 PPIL3Q9H2H8 161 aaKnown RBP21.16■□□□□ 0.98
CPSF6-205ENST00000550075 KIF25Q9UIL4 384 aa21.16■□□□□ 0.98
CPSF6-205ENST00000550075 MEIKINA0A087WXM9 373 aa21.15■□□□□ 0.98
CPSF6-205ENST00000550075 CCRL2O00421 344 aa21.15■□□□□ 0.98
CPSF6-205ENST00000550075 CALRP27797 417 aaKnown RBP21.15■□□□□ 0.98
CPSF6-205ENST00000550075 GLP1RP43220 463 aa21.15■□□□□ 0.98
CPSF6-205ENST00000550075 TAF9Q16594 264 aa21.15■□□□□ 0.98
CPSF6-205ENST00000550075 SELENOIQ9C0D9 397 aa21.15■□□□□ 0.98
CPSF6-205ENST00000550075 KIAA2026Q5HYC2 2103 aa21.14■□□□□ 0.98
CPSF6-205ENST00000550075 ZNF729A6NN14 1252 aaPredicted RBP21.14■□□□□ 0.97
CPSF6-205ENST00000550075 HTR2CP28335 458 aa21.14■□□□□ 0.97
CPSF6-205ENST00000550075 C16orf87Q6PH81 154 aa21.14■□□□□ 0.97
CPSF6-205ENST00000550075 HEPN1Q6WQI6 88 aa21.14■□□□□ 0.97
CPSF6-205ENST00000550075 ZNF565Q8N9K5 539 aa21.14■□□□□ 0.97
CPSF6-205ENST00000550075 BANF2Q9H503 90 aa21.14■□□□□ 0.97
CPSF6-205ENST00000550075 PLGRKTQ9HBL7 147 aa21.14■□□□□ 0.97
CPSF6-205ENST00000550075 TBL2Q9Y4P3 447 aaKnown RBP21.14■□□□□ 0.97
CPSF6-205ENST00000550075 TMEM30CPA0ZSE6 113 aa21.13■□□□□ 0.97
CPSF6-205ENST00000550075 ARG1P05089 322 aa21.13■□□□□ 0.97
CPSF6-205ENST00000550075 RBM39Q14498 530 aaKnown RBP21.13■□□□□ 0.97
CPSF6-205ENST00000550075 RSBN1Q5VWQ0 802 aaPredicted RBP21.13■□□□□ 0.97
CPSF6-205ENST00000550075 BEND2Q8NDZ0 799 aa21.13■□□□□ 0.97
CPSF6-205ENST00000550075 OR11H6Q8NGC7 330 aa21.13■□□□□ 0.97
CPSF6-205ENST00000550075 Q96M66 194 aa21.13■□□□□ 0.97
CPSF6-205ENST00000550075 TMEM133Q9H2Q1 129 aa21.13■□□□□ 0.97
CPSF6-205ENST00000550075 TNFRSF19Q9NS68 423 aa21.13■□□□□ 0.97
CPSF6-205ENST00000550075 SLC22A1O15245 554 aa21.12■□□□□ 0.97
CPSF6-205ENST00000550075 IGHV4-59P01825 116 aa21.12■□□□□ 0.97
CPSF6-205ENST00000550075 GALP22466 123 aa21.12■□□□□ 0.97
CPSF6-205ENST00000550075 MYL9P24844 172 aa21.12■□□□□ 0.97
CPSF6-205ENST00000550075 CDK2P24941 298 aa21.12■□□□□ 0.97
CPSF6-205ENST00000550075 IER3P46695 156 aa21.12■□□□□ 0.97
CPSF6-205ENST00000550075 PSMD7P51665 324 aa21.12■□□□□ 0.97
CPSF6-205ENST00000550075 DYNC1I2Q13409 638 aaKnown RBP21.12■□□□□ 0.97
CPSF6-205ENST00000550075 PRAMEF5Q5TYX0 476 aa21.12■□□□□ 0.97
CPSF6-205ENST00000550075 ZNF626Q68DY1 528 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms