RNA–Protein interactions for RNA: ENST00000549915.5

RAB5B-207, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5B, Length 494 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-207ENST00000549915 LYRM2Q9NU23 88 aaPredicted RBP3.28□□□□□ -1.88
RAB5B-207ENST00000549915 ZNF701Q9NV72 531 aaPredicted RBP3.28□□□□□ -1.88
RAB5B-207ENST00000549915 RNF186Q9NXI6 227 aa3.28□□□□□ -1.88
RAB5B-207ENST00000549915 ALKBH4Q9NXW9 302 aa3.28□□□□□ -1.88
RAB5B-207ENST00000549915 LRFN1Q9P244 771 aa3.28□□□□□ -1.88
RAB5B-207ENST00000549915 OR14J1Q9UGF5 321 aa3.28□□□□□ -1.88
RAB5B-207ENST00000549915 VDAC3Q9Y277 283 aa3.28□□□□□ -1.88
RAB5B-207ENST00000549915 RCL1Q9Y2P8 373 aaKnown RBP3.28□□□□□ -1.88
RAB5B-207ENST00000549915 POLR1DQ9Y2S0 133 aa3.28□□□□□ -1.88
RAB5B-207ENST00000549915 CLDN16Q9Y5I7 305 aa3.28□□□□□ -1.88
RAB5B-207ENST00000549915 LIPGQ9Y5X9 500 aa3.28□□□□□ -1.88
RAB5B-207ENST00000549915 PIAS3Q9Y6X2 628 aa3.28□□□□□ -1.88
RAB5B-207ENST00000549915 COL5A1P20908 1838 aaPredicted RBP3.28□□□□□ -1.88
RAB5B-207ENST00000549915 TRANK1O15050 2925 aa3.27□□□□□ -1.89
RAB5B-207ENST00000549915 EML5Q05BV3 1969 aa3.27□□□□□ -1.89
RAB5B-207ENST00000549915 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.27□□□□□ -1.89
RAB5B-207ENST00000549915 IGSF23A1L1A6 192 aa3.27□□□□□ -1.89
RAB5B-207ENST00000549915 ANKUB1A6NFN9 424 aa3.27□□□□□ -1.89
RAB5B-207ENST00000549915 ZNF727A8MUV8 499 aa3.27□□□□□ -1.89
RAB5B-207ENST00000549915 C17orf105B2RV13 164 aa3.27□□□□□ -1.89
RAB5B-207ENST00000549915 TMEM250H0YL14 139 aa3.27□□□□□ -1.89
RAB5B-207ENST00000549915 SDCBPO00560 298 aaPredicted RBP3.27□□□□□ -1.89
RAB5B-207ENST00000549915 DLEU1O43261 78 aa3.27□□□□□ -1.89
RAB5B-207ENST00000549915 XRCC2O43543 280 aa3.27□□□□□ -1.89
RAB5B-207ENST00000549915 C1QL1O75973 258 aa3.27□□□□□ -1.89
RAB5B-207ENST00000549915 DIRAS3O95661 229 aa3.27□□□□□ -1.89
RAB5B-207ENST00000549915 EML2O95834 649 aa3.27□□□□□ -1.89
RAB5B-207ENST00000549915 NUDT14O95848 222 aa3.27□□□□□ -1.89
RAB5B-207ENST00000549915 HRASP01112 189 aa3.27□□□□□ -1.89
RAB5B-207ENST00000549915 IFNA5P01569 189 aa3.27□□□□□ -1.89
RAB5B-207ENST00000549915 IGHG1P01857 330 aa3.27□□□□□ -1.89
RAB5B-207ENST00000549915 IGKV3-11P04433 115 aa3.27□□□□□ -1.89
RAB5B-207ENST00000549915 QDPRP09417 244 aa3.27□□□□□ -1.89
RAB5B-207ENST00000549915 WNT2P09544 360 aa3.27□□□□□ -1.89
RAB5B-207ENST00000549915 TMEM225BP0DP42 221 aa3.27□□□□□ -1.89
RAB5B-207ENST00000549915 SLC25A6P12236 298 aa3.27□□□□□ -1.89
RAB5B-207ENST00000549915 PVRP15151 417 aa3.27□□□□□ -1.89
RAB5B-207ENST00000549915 KLK2P20151 261 aa3.27□□□□□ -1.89
RAB5B-207ENST00000549915 HNRNPA2B1P22626 353 aaKnown RBP3.27□□□□□ -1.89
RAB5B-207ENST00000549915 SRP14P37108 136 aaKnown RBP3.27□□□□□ -1.89
RAB5B-207ENST00000549915 NKX2-1P43699 371 aaPredicted RBP3.27□□□□□ -1.89
RAB5B-207ENST00000549915 OR1D4P47884 311 aa3.27□□□□□ -1.89
RAB5B-207ENST00000549915 FHITP49789 147 aa3.27□□□□□ -1.89
RAB5B-207ENST00000549915 TNFSF10P50591 281 aa3.27□□□□□ -1.89
RAB5B-207ENST00000549915 TDGF1P3P51864 188 aa3.27□□□□□ -1.89
RAB5B-207ENST00000549915 ZNF121P58317 390 aaPredicted RBP3.27□□□□□ -1.89
RAB5B-207ENST00000549915 ERVFC1-1P60608 527 aa3.27□□□□□ -1.89
RAB5B-207ENST00000549915 HERV-K104P61576 105 aa3.27□□□□□ -1.89
RAB5B-207ENST00000549915 HNRNPKP61978 463 aaKnown RBP eCLIP3.27□□□□□ -1.89
RAB5B-207ENST00000549915 LCN2P80188 198 aa3.27□□□□□ -1.89
RAB5B-207ENST00000549915 DEFB103AP81534 67 aa3.27□□□□□ -1.89
RAB5B-207ENST00000549915 PAX5Q02548 391 aa3.27□□□□□ -1.89
RAB5B-207ENST00000549915 TLE3Q04726 772 aa3.27□□□□□ -1.89
RAB5B-207ENST00000549915 PLCXD2Q0VAA5 305 aa3.27□□□□□ -1.89
RAB5B-207ENST00000549915 FOXF1Q12946 379 aa3.27□□□□□ -1.89
RAB5B-207ENST00000549915 GPM6BQ13491 265 aa3.27□□□□□ -1.89
RAB5B-207ENST00000549915 KISS1Q15726 138 aa3.27□□□□□ -1.89
RAB5B-207ENST00000549915 EXT1Q16394 746 aa3.27□□□□□ -1.89
RAB5B-207ENST00000549915 SRSF7Q16629 238 aaKnown RBP eCLIP3.27□□□□□ -1.89
RAB5B-207ENST00000549915 MPV17LQ2QL34 196 aa3.27□□□□□ -1.89
RAB5B-207ENST00000549915 C1orf194Q5T5A4 169 aa3.27□□□□□ -1.89
RAB5B-207ENST00000549915 GFI1BQ5VTD9 330 aa3.27□□□□□ -1.89
RAB5B-207ENST00000549915 ZNF343Q6P1L6 599 aa3.27□□□□□ -1.89
RAB5B-207ENST00000549915 Q6ZS49 121 aa3.27□□□□□ -1.89
RAB5B-207ENST00000549915 GALNTL5Q7Z4T8 443 aa3.27□□□□□ -1.89
RAB5B-207ENST00000549915 CENPVQ7Z7K6 275 aaPredicted RBP3.27□□□□□ -1.89
RAB5B-207ENST00000549915 MRGPRGQ86SM5 289 aa3.27□□□□□ -1.89
RAB5B-207ENST00000549915 COMMD2Q86X83 199 aa3.27□□□□□ -1.89
RAB5B-207ENST00000549915 ZNF573Q86YE8 665 aa3.27□□□□□ -1.89
RAB5B-207ENST00000549915 LINC00346Q8IVM7 164 aa3.27□□□□□ -1.89
RAB5B-207ENST00000549915 ZNF100Q8IYN0 542 aa3.27□□□□□ -1.89
RAB5B-207ENST00000549915 CMTM1Q8IZ96 169 aa3.27□□□□□ -1.89
RAB5B-207ENST00000549915 ZNF664Q8N3J9 261 aa3.27□□□□□ -1.89
RAB5B-207ENST00000549915 TMEM252Q8N6L7 170 aa3.27□□□□□ -1.89
RAB5B-207ENST00000549915 SLC35G3Q8N808 338 aa3.27□□□□□ -1.89
RAB5B-207ENST00000549915 TET1Q8NFU7 2136 aa3.27□□□□□ -1.89
RAB5B-207ENST00000549915 OR10S1Q8NGN2 331 aa3.27□□□□□ -1.89
RAB5B-207ENST00000549915 OR4X1Q8NH49 305 aa3.27□□□□□ -1.89
RAB5B-207ENST00000549915 OR2V1Q8NHB1 315 aa3.27□□□□□ -1.89
RAB5B-207ENST00000549915 OR14C36Q8NHC7 312 aa3.27□□□□□ -1.89
RAB5B-207ENST00000549915 OR51E1Q8TCB6 317 aa3.27□□□□□ -1.89
RAB5B-207ENST00000549915 GPR119Q8TDV5 335 aa3.27□□□□□ -1.89
RAB5B-207ENST00000549915 PTPMT1Q8WUK0 201 aaPredicted RBP3.27□□□□□ -1.89
RAB5B-207ENST00000549915 HAS2Q92819 552 aa3.27□□□□□ -1.89
RAB5B-207ENST00000549915 ADIPOR1Q96A54 375 aa3.27□□□□□ -1.89
RAB5B-207ENST00000549915 PINX1Q96BK5 328 aaKnown RBP3.27□□□□□ -1.89
RAB5B-207ENST00000549915 DDIT4LQ96D03 193 aa3.27□□□□□ -1.89
RAB5B-207ENST00000549915 ZNF845Q96IR2 970 aaPredicted RBP3.27□□□□□ -1.89
RAB5B-207ENST00000549915 RAX2Q96IS3 184 aa3.27□□□□□ -1.89
RAB5B-207ENST00000549915 TMEM56Q96MV1 263 aa3.27□□□□□ -1.89
RAB5B-207ENST00000549915 LRRC3BQ96PB8 259 aa3.27□□□□□ -1.89
RAB5B-207ENST00000549915 GPHA2Q96T91 129 aa3.27□□□□□ -1.89
RAB5B-207ENST00000549915 RARRES2Q99969 163 aa3.27□□□□□ -1.89
RAB5B-207ENST00000549915 C20orf144Q9BQM9 153 aa3.27□□□□□ -1.89
RAB5B-207ENST00000549915 TPSD1Q9BZJ3 242 aa3.27□□□□□ -1.89
RAB5B-207ENST00000549915 PARP12Q9H0J9 701 aaKnown RBP3.27□□□□□ -1.89
RAB5B-207ENST00000549915 TMEM222Q9H0R3 208 aa3.27□□□□□ -1.89
RAB5B-207ENST00000549915 NXF5Q9H1B4 397 aaKnown RBP3.27□□□□□ -1.89
RAB5B-207ENST00000549915 PCED1AQ9H1Q7 454 aa3.27□□□□□ -1.89
RAB5B-207ENST00000549915 PLK3Q9H4B4 646 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms