RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 WIPI2Q9Y4P8 454 aa6.77□□□□□ -1.33
DEPDC4-207ENST00000549249 NPTNQ9Y639 398 aa6.77□□□□□ -1.33
DEPDC4-207ENST00000549249 ABCA12Q86UK0 2595 aa6.77□□□□□ -1.33
DEPDC4-207ENST00000549249 AKAP6Q13023 2319 aa6.77□□□□□ -1.33
DEPDC4-207ENST00000549249 IGKV1D-8A0A087WSZ0 117 aa6.76□□□□□ -1.33
DEPDC4-207ENST00000549249 IGHV1-69-2A0A0G2JMI3 117 aa6.76□□□□□ -1.33
DEPDC4-207ENST00000549249 A0A1B0GW55 424 aa6.76□□□□□ -1.33
DEPDC4-207ENST00000549249 TMEM82A0PJX8 343 aa6.76□□□□□ -1.33
DEPDC4-207ENST00000549249 OR2AT4A6NND4 320 aa6.76□□□□□ -1.33
DEPDC4-207ENST00000549249 LYNX1G3V0Z9 82 aa6.76□□□□□ -1.33
DEPDC4-207ENST00000549249 SH2D1BO14796 132 aa6.76□□□□□ -1.33
DEPDC4-207ENST00000549249 RP2O75695 350 aa6.76□□□□□ -1.33
DEPDC4-207ENST00000549249 LY6HO94772 140 aa6.76□□□□□ -1.33
DEPDC4-207ENST00000549249 NAPSAO96009 420 aa6.76□□□□□ -1.33
DEPDC4-207ENST00000549249 MT-ND4P03905 459 aa6.76□□□□□ -1.33
DEPDC4-207ENST00000549249 CD74P04233 296 aa6.76□□□□□ -1.33
DEPDC4-207ENST00000549249 CD3DP04234 171 aa6.76□□□□□ -1.33
DEPDC4-207ENST00000549249 GLAP06280 429 aa6.76□□□□□ -1.33
DEPDC4-207ENST00000549249 DUX4L2P0CJ85 424 aa6.76□□□□□ -1.33
DEPDC4-207ENST00000549249 DUX4L3P0CJ86 424 aa6.76□□□□□ -1.33
DEPDC4-207ENST00000549249 DUX4L4P0CJ87 422 aa6.76□□□□□ -1.33
DEPDC4-207ENST00000549249 DUX4L5P0CJ88 424 aa6.76□□□□□ -1.33
DEPDC4-207ENST00000549249 DUX4L6P0CJ89 424 aa6.76□□□□□ -1.33
DEPDC4-207ENST00000549249 DUX4L7P0CJ90 424 aa6.76□□□□□ -1.33
DEPDC4-207ENST00000549249 LYNX1P0DP58 116 aa6.76□□□□□ -1.33
DEPDC4-207ENST00000549249 SELLP14151 372 aa6.76□□□□□ -1.33
DEPDC4-207ENST00000549249 COX6B1P14854 86 aa6.76□□□□□ -1.33
DEPDC4-207ENST00000549249 DTYMKP23919 212 aa6.76□□□□□ -1.33
DEPDC4-207ENST00000549249 COL8A2P25067 703 aa6.76□□□□□ -1.33
DEPDC4-207ENST00000549249 CDKN1AP38936 164 aa6.76□□□□□ -1.33
DEPDC4-207ENST00000549249 OR3A1P47881 315 aa6.76□□□□□ -1.33
DEPDC4-207ENST00000549249 INPP1P49441 399 aa6.76□□□□□ -1.33
DEPDC4-207ENST00000549249 DEFA1P59665 94 aa6.76□□□□□ -1.33
DEPDC4-207ENST00000549249 DEFA3P59666 94 aa6.76□□□□□ -1.33
DEPDC4-207ENST00000549249 ACTBP60709 375 aa6.76□□□□□ -1.33
DEPDC4-207ENST00000549249 ACTG1P63261 375 aa6.76□□□□□ -1.33
DEPDC4-207ENST00000549249 COL10A1Q03692 680 aa6.76□□□□□ -1.33
DEPDC4-207ENST00000549249 DYRK1AQ13627 763 aa6.76□□□□□ -1.33
DEPDC4-207ENST00000549249 ARL6IP1Q15041 203 aa6.76□□□□□ -1.33
DEPDC4-207ENST00000549249 OXA1LQ15070 435 aa6.76□□□□□ -1.33
DEPDC4-207ENST00000549249 PAN3Q58A45 887 aaKnown RBP6.76□□□□□ -1.33
DEPDC4-207ENST00000549249 SHEQ5VZ18 495 aa6.76□□□□□ -1.33
DEPDC4-207ENST00000549249 OR52W1Q6IF63 320 aa6.76□□□□□ -1.33
DEPDC4-207ENST00000549249 DUX4L9Q6RFH8 374 aaPredicted RBP6.76□□□□□ -1.33
DEPDC4-207ENST00000549249 FIP1L1Q6UN15 594 aaKnown RBP6.76□□□□□ -1.33
DEPDC4-207ENST00000549249 C17orf107Q6ZR85 190 aa6.76□□□□□ -1.33
DEPDC4-207ENST00000549249 GDPD3Q7L5L3 318 aa6.76□□□□□ -1.33
DEPDC4-207ENST00000549249 HOGA1Q86XE5 327 aa6.76□□□□□ -1.33
DEPDC4-207ENST00000549249 CENPSQ8N2Z9 138 aa6.76□□□□□ -1.33
DEPDC4-207ENST00000549249 TMEM229BQ8NBD8 167 aa6.76□□□□□ -1.33
DEPDC4-207ENST00000549249 OR4D10Q8NGI6 311 aa6.76□□□□□ -1.33
DEPDC4-207ENST00000549249 OR4C16Q8NGL9 310 aa6.76□□□□□ -1.33
DEPDC4-207ENST00000549249 ANGPTL6Q8NI99 470 aa6.76□□□□□ -1.33
DEPDC4-207ENST00000549249 CMSS1Q9BQ75 279 aaKnown RBP6.76□□□□□ -1.33
DEPDC4-207ENST00000549249 SPACA1Q9HBV2 294 aa6.76□□□□□ -1.33
DEPDC4-207ENST00000549249 DNAJB11Q9UBS4 358 aa6.76□□□□□ -1.33
DEPDC4-207ENST00000549249 DUX4Q9UBX2 424 aa6.76□□□□□ -1.33
DEPDC4-207ENST00000549249 TRBV6-6A0A0A6YYG2 114 aa6.75□□□□□ -1.33
DEPDC4-207ENST00000549249 A0A1B0GVG6 124 aa6.75□□□□□ -1.33
DEPDC4-207ENST00000549249 OOEPA6NGQ2 149 aa6.75□□□□□ -1.33
DEPDC4-207ENST00000549249 MCRIP1C9JLW8 97 aa6.75□□□□□ -1.33
DEPDC4-207ENST00000549249 IFNL4K9M1U5 179 aa6.75□□□□□ -1.33
DEPDC4-207ENST00000549249 M0QYG6 137 aa6.75□□□□□ -1.33
DEPDC4-207ENST00000549249 OVOL3O00110 214 aa6.75□□□□□ -1.33
DEPDC4-207ENST00000549249 LGALS8O00214 317 aa6.75□□□□□ -1.33
DEPDC4-207ENST00000549249 TNFRSF13BO14836 293 aaPredicted RBP6.75□□□□□ -1.33
DEPDC4-207ENST00000549249 NDUFS7O75251 213 aa6.75□□□□□ -1.33
DEPDC4-207ENST00000549249 ZNF737O75373 536 aa6.75□□□□□ -1.33
DEPDC4-207ENST00000549249 FCN3O75636 299 aa6.75□□□□□ -1.33
DEPDC4-207ENST00000549249 ECDO95905 644 aaPredicted RBP6.75□□□□□ -1.33
DEPDC4-207ENST00000549249 PTTG1O95997 202 aa6.75□□□□□ -1.33
DEPDC4-207ENST00000549249 GYPAP02724 150 aa6.75□□□□□ -1.33
DEPDC4-207ENST00000549249 CSF1P09603 554 aa6.75□□□□□ -1.33
DEPDC4-207ENST00000549249 ZNF735P0CB33 412 aa6.75□□□□□ -1.33
DEPDC4-207ENST00000549249 GSTT2BP0CG30 244 aa6.75□□□□□ -1.33
DEPDC4-207ENST00000549249 IRF2P14316 349 aa6.75□□□□□ -1.33
DEPDC4-207ENST00000549249 HLA-DMAP28067 261 aa6.75□□□□□ -1.33
DEPDC4-207ENST00000549249 PRDX2P32119 198 aa6.75□□□□□ -1.33
DEPDC4-207ENST00000549249 CBX5P45973 191 aa6.75□□□□□ -1.33
DEPDC4-207ENST00000549249 TAS2R19P59542 299 aa6.75□□□□□ -1.33
DEPDC4-207ENST00000549249 AP3S2P59780 193 aa6.75□□□□□ -1.33
DEPDC4-207ENST00000549249 ATXN7L3Q14CW9 347 aaPredicted RBP6.75□□□□□ -1.33
DEPDC4-207ENST00000549249 MICBQ29980 383 aa6.75□□□□□ -1.33
DEPDC4-207ENST00000549249 RSBN1Q5VWQ0 802 aaPredicted RBP6.75□□□□□ -1.33
DEPDC4-207ENST00000549249 STEAP1BQ6NZ63 245 aa6.75□□□□□ -1.33
DEPDC4-207ENST00000549249 ZNF880Q6PDB4 577 aa6.75□□□□□ -1.33
DEPDC4-207ENST00000549249 C5orf24Q7Z6I8 188 aa6.75□□□□□ -1.33
DEPDC4-207ENST00000549249 NRARPQ7Z6K4 114 aa6.75□□□□□ -1.33
DEPDC4-207ENST00000549249 GAPTQ8N292 157 aa6.75□□□□□ -1.33
DEPDC4-207ENST00000549249 DEFB108BQ8NET1 73 aa6.75□□□□□ -1.33
DEPDC4-207ENST00000549249 MRPL30Q8TCC3 161 aaKnown RBP6.75□□□□□ -1.33
DEPDC4-207ENST00000549249 CCL17Q92583 94 aa6.75□□□□□ -1.33
DEPDC4-207ENST00000549249 COQ2Q96H96 371 aa6.75□□□□□ -1.33
DEPDC4-207ENST00000549249 COX4I2Q96KJ9 171 aa6.75□□□□□ -1.33
DEPDC4-207ENST00000549249 GAFA1Q96PS6 74 aa6.75□□□□□ -1.33
DEPDC4-207ENST00000549249 C7orf50Q9BRJ6 194 aaKnown RBP6.75□□□□□ -1.33
DEPDC4-207ENST00000549249 CHST6Q9GZX3 395 aa6.75□□□□□ -1.33
DEPDC4-207ENST00000549249 SHARPINQ9H0F6 387 aa6.75□□□□□ -1.33
DEPDC4-207ENST00000549249 RAB1BQ9H0U4 201 aa6.75□□□□□ -1.33
DEPDC4-207ENST00000549249 CLEC4MQ9H2X3 399 aaPredicted RBP6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms