RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 HUWE1Q7Z6Z7 4374 aaKnown RBP10.79□□□□□ -0.68
CDX2-202ENST00000548877 K7N7A8 449 aa10.78□□□□□ -0.68
CDX2-202ENST00000548877 H2BFMP0C1H6 154 aa10.78□□□□□ -0.68
CDX2-202ENST00000548877 PGA5P0DJD9 388 aa10.78□□□□□ -0.68
CDX2-202ENST00000548877 LMO1P25800 156 aa10.78□□□□□ -0.68
CDX2-202ENST00000548877 MAP2K3P46734 347 aa10.78□□□□□ -0.68
CDX2-202ENST00000548877 THBS3P49746 956 aa10.78□□□□□ -0.68
CDX2-202ENST00000548877 RPL22L1Q6P5R6 122 aaKnown RBP10.78□□□□□ -0.68
CDX2-202ENST00000548877 HAGHLQ6PII5 290 aaPredicted RBP10.78□□□□□ -0.68
CDX2-202ENST00000548877 PHYHIPQ92561 330 aa10.78□□□□□ -0.68
CDX2-202ENST00000548877 AKR1E2Q96JD6 320 aa10.78□□□□□ -0.68
CDX2-202ENST00000548877 LYSTQ99698 3801 aa10.78□□□□□ -0.68
CDX2-202ENST00000548877 SLIRPQ9GZT3 109 aaKnown RBP10.78□□□□□ -0.68
CDX2-202ENST00000548877 NXF2Q9GZY0 626 aaKnown RBP10.78□□□□□ -0.68
CDX2-202ENST00000548877 HES4Q9HCC6 221 aa10.78□□□□□ -0.68
CDX2-202ENST00000548877 BRD7Q9NPI1 651 aa10.78□□□□□ -0.68
CDX2-202ENST00000548877 TXNL4BQ9NX01 149 aaKnown RBP10.78□□□□□ -0.68
CDX2-202ENST00000548877 LAMP5Q9UJQ1 280 aa10.78□□□□□ -0.68
CDX2-202ENST00000548877 A0A075B6Q4 140 aa10.77□□□□□ -0.69
CDX2-202ENST00000548877 A0A0U1RQV5 110 aa10.77□□□□□ -0.69
CDX2-202ENST00000548877 PNMA8CA0A1B0GUJ8 204 aa10.77□□□□□ -0.69
CDX2-202ENST00000548877 METTL15A6NJ78 407 aa10.77□□□□□ -0.69
CDX2-202ENST00000548877 OGG1O15527 345 aa10.77□□□□□ -0.69
CDX2-202ENST00000548877 RAMP3O60896 148 aa10.77□□□□□ -0.69
CDX2-202ENST00000548877 KRT8P05787 483 aa10.77□□□□□ -0.69
CDX2-202ENST00000548877 SLC6A1P30531 599 aa10.77□□□□□ -0.69
CDX2-202ENST00000548877 PSMA6P60900 246 aaKnown RBP10.77□□□□□ -0.69
CDX2-202ENST00000548877 DGCR2P98153 550 aa10.77□□□□□ -0.69
CDX2-202ENST00000548877 CASC10Q5T4H9 136 aa10.77□□□□□ -0.69
CDX2-202ENST00000548877 KCTD18Q6PI47 426 aaPredicted RBP10.77□□□□□ -0.69
CDX2-202ENST00000548877 C10orf99Q6UWK7 81 aa10.77□□□□□ -0.69
CDX2-202ENST00000548877 OR51D1Q8NGF3 324 aa10.77□□□□□ -0.69
CDX2-202ENST00000548877 OR8B12Q8NGG6 310 aa10.77□□□□□ -0.69
CDX2-202ENST00000548877 OR6Q1Q8NGQ2 317 aa10.77□□□□□ -0.69
CDX2-202ENST00000548877 OR6N2Q8NGY6 317 aa10.77□□□□□ -0.69
CDX2-202ENST00000548877 THRSPQ92748 146 aa10.77□□□□□ -0.69
CDX2-202ENST00000548877 NRIP2Q9BQI9 281 aa10.77□□□□□ -0.69
CDX2-202ENST00000548877 NIPAL2Q9H841 368 aa10.77□□□□□ -0.69
CDX2-202ENST00000548877 ACOD1A6NK06 481 aa10.76□□□□□ -0.69
CDX2-202ENST00000548877 SELENOFO60613 162 aa10.76□□□□□ -0.69
CDX2-202ENST00000548877 GATBO75879 557 aaKnown RBP10.76□□□□□ -0.69
CDX2-202ENST00000548877 IGLV3-1P01715 115 aa10.76□□□□□ -0.69
CDX2-202ENST00000548877 AMY1AP04745 511 aa10.76□□□□□ -0.69
CDX2-202ENST00000548877 AMY2AP04746 511 aa10.76□□□□□ -0.69
CDX2-202ENST00000548877 CHRM2P08172 466 aa10.76□□□□□ -0.69
CDX2-202ENST00000548877 RPS25P62851 125 aaKnown RBP10.76□□□□□ -0.69
CDX2-202ENST00000548877 CDK5R1Q15078 307 aa10.76□□□□□ -0.69
CDX2-202ENST00000548877 CEP78Q5JTW2 689 aa10.76□□□□□ -0.69
CDX2-202ENST00000548877 DMKNQ6E0U4 476 aaPredicted RBP10.76□□□□□ -0.69
CDX2-202ENST00000548877 UNQ9370/PRO34162Q6UXP9 181 aa10.76□□□□□ -0.69
CDX2-202ENST00000548877 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.76□□□□□ -0.69
CDX2-202ENST00000548877 OSR2Q8N2R0 312 aa10.76□□□□□ -0.69
CDX2-202ENST00000548877 OTOSQ8NHW6 89 aa10.76□□□□□ -0.69
CDX2-202ENST00000548877 TMEM203Q969S6 136 aa10.76□□□□□ -0.69
CDX2-202ENST00000548877 SMIM19Q96E16 107 aa10.76□□□□□ -0.69
CDX2-202ENST00000548877 P2RX4Q99571 388 aa10.76□□□□□ -0.69
CDX2-202ENST00000548877 TMED9Q9BVK6 235 aa10.76□□□□□ -0.69
CDX2-202ENST00000548877 ISG20L2Q9H9L3 353 aaKnown RBP10.76□□□□□ -0.69
CDX2-202ENST00000548877 GNG8Q9UK08 70 aa10.76□□□□□ -0.69
CDX2-202ENST00000548877 HILPDAQ9Y5L2 63 aa10.76□□□□□ -0.69
CDX2-202ENST00000548877 J3QT63 122 aa10.75□□□□□ -0.69
CDX2-202ENST00000548877 GABRPO00591 440 aa10.75□□□□□ -0.69
CDX2-202ENST00000548877 ZNF737O75373 536 aa10.75□□□□□ -0.69
CDX2-202ENST00000548877 ARL6IP5O75915 188 aa10.75□□□□□ -0.69
CDX2-202ENST00000548877 LALBAP00709 142 aa10.75□□□□□ -0.69
CDX2-202ENST00000548877 LPLP06858 475 aa10.75□□□□□ -0.69
CDX2-202ENST00000548877 MYL9P24844 172 aa10.75□□□□□ -0.69
CDX2-202ENST00000548877 MPZP25189 248 aa10.75□□□□□ -0.69
CDX2-202ENST00000548877 MYCNOSP40205 109 aa10.75□□□□□ -0.69
CDX2-202ENST00000548877 MTNR1BP49286 362 aa10.75□□□□□ -0.69
CDX2-202ENST00000548877 CEBPDP49716 269 aaPredicted RBP10.75□□□□□ -0.69
CDX2-202ENST00000548877 ERVK11-1P61568 191 aa10.75□□□□□ -0.69
CDX2-202ENST00000548877 FABP5Q01469 135 aa10.75□□□□□ -0.69
CDX2-202ENST00000548877 MEF2CQ06413 473 aaPredicted RBP10.75□□□□□ -0.69
CDX2-202ENST00000548877 C22orf42Q6IC83 251 aa10.75□□□□□ -0.69
CDX2-202ENST00000548877 TCF23Q7RTU1 214 aa10.75□□□□□ -0.69
CDX2-202ENST00000548877 TPRA1Q86W33 373 aa10.75□□□□□ -0.69
CDX2-202ENST00000548877 SLC25A46Q96AG3 418 aa10.75□□□□□ -0.69
CDX2-202ENST00000548877 PELI1Q96FA3 418 aa10.75□□□□□ -0.69
CDX2-202ENST00000548877 ZNF488Q96MN9 340 aa10.75□□□□□ -0.69
CDX2-202ENST00000548877 ZNF714Q96N38 554 aa10.75□□□□□ -0.69
CDX2-202ENST00000548877 RBM14Q96PK6 669 aaKnown RBP10.75□□□□□ -0.69
CDX2-202ENST00000548877 POLDIP2Q9Y2S7 368 aa10.75□□□□□ -0.69
CDX2-202ENST00000548877 IGHV2-26A0A0B4J1V2 119 aa10.74□□□□□ -0.69
CDX2-202ENST00000548877 TRBV2A0A0J9YWF9 115 aa10.74□□□□□ -0.69
CDX2-202ENST00000548877 TMEM127O75204 238 aa10.74□□□□□ -0.69
CDX2-202ENST00000548877 OR2F2O95006 317 aa10.74□□□□□ -0.69
CDX2-202ENST00000548877 CDRT1O95170 752 aa10.74□□□□□ -0.69
CDX2-202ENST00000548877 ALOX5APP20292 161 aa10.74□□□□□ -0.69
CDX2-202ENST00000548877 HTR1DP28221 377 aa10.74□□□□□ -0.69
CDX2-202ENST00000548877 RPL23AP62750 156 aaKnown RBP10.74□□□□□ -0.69
CDX2-202ENST00000548877 ZNF45Q02386 682 aa10.74□□□□□ -0.69
CDX2-202ENST00000548877 RIPPLY1Q0D2K3 151 aa10.74□□□□□ -0.69
CDX2-202ENST00000548877 DOC2BQ14184 412 aa10.74□□□□□ -0.69
CDX2-202ENST00000548877 ABCA11PQ4W5N1 156 aa10.74□□□□□ -0.69
CDX2-202ENST00000548877 TP53I3Q53FA7 332 aa10.74□□□□□ -0.69
CDX2-202ENST00000548877 SPANXN2Q5MJ10 180 aa10.74□□□□□ -0.69
CDX2-202ENST00000548877 ZNF684Q5T5D7 378 aa10.74□□□□□ -0.69
CDX2-202ENST00000548877 DEGS2Q6QHC5 323 aa10.74□□□□□ -0.69
CDX2-202ENST00000548877 ZNF573Q86YE8 665 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 184.6 ms