RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 DNAH12Q6ZR08 3092 aa3.01□□□□□ -1.93
SCAF11-210ENST00000547654 ZNF462Q96JM2 2506 aa3□□□□□ -1.93
SCAF11-210ENST00000547654 ANKRD30AQ9BXX3 1397 aa3□□□□□ -1.93
SCAF11-210ENST00000547654 RAB3GAP2Q9H2M9 1393 aa3□□□□□ -1.93
SCAF11-210ENST00000547654 ASTN1O14525 1302 aa3□□□□□ -1.93
SCAF11-210ENST00000547654 FAM168BA1KXE4 195 aa3□□□□□ -1.93
SCAF11-210ENST00000547654 PLAC8L1A1L4L8 177 aa3□□□□□ -1.93
SCAF11-210ENST00000547654 RBFOX3A6NFN3 312 aa3□□□□□ -1.93
SCAF11-210ENST00000547654 ZNF705GA8MUZ8 300 aaPredicted RBP3□□□□□ -1.93
SCAF11-210ENST00000547654 EFCAB9A8MZ26 197 aa3□□□□□ -1.93
SCAF11-210ENST00000547654 F5H5K5 113 aa3□□□□□ -1.93
SCAF11-210ENST00000547654 M0QZ92 97 aa3□□□□□ -1.93
SCAF11-210ENST00000547654 M0R036 132 aa3□□□□□ -1.93
SCAF11-210ENST00000547654 DNASE2O00115 360 aaPredicted RBP3□□□□□ -1.93
SCAF11-210ENST00000547654 CCRL2O00421 344 aa3□□□□□ -1.93
SCAF11-210ENST00000547654 MANBAO00462 879 aa3□□□□□ -1.93
SCAF11-210ENST00000547654 TAAR5O14804 337 aa3□□□□□ -1.93
SCAF11-210ENST00000547654 PFDN6O15212 129 aa3□□□□□ -1.93
SCAF11-210ENST00000547654 TRAPPC3O43617 180 aa3□□□□□ -1.93
SCAF11-210ENST00000547654 SYNGR1O43759 233 aa3□□□□□ -1.93
SCAF11-210ENST00000547654 PCCAP05165 728 aaPredicted RBP3□□□□□ -1.93
SCAF11-210ENST00000547654 IGHV4-34P06331 123 aa3□□□□□ -1.93
SCAF11-210ENST00000547654 ATF1P18846 271 aa3□□□□□ -1.93
SCAF11-210ENST00000547654 TGM4P49221 684 aa3□□□□□ -1.93
SCAF11-210ENST00000547654 PSMD7P51665 324 aa3□□□□□ -1.93
SCAF11-210ENST00000547654 IGLV3-21P80748 117 aaPredicted RBP3□□□□□ -1.93
SCAF11-210ENST00000547654 MRPS25P82663 173 aaKnown RBP3□□□□□ -1.93
SCAF11-210ENST00000547654 CKAP4Q07065 602 aaKnown RBP3□□□□□ -1.93
SCAF11-210ENST00000547654 BAXQ07812 192 aa3□□□□□ -1.93
SCAF11-210ENST00000547654 PPIDQ08752 370 aaKnown RBP3□□□□□ -1.93
SCAF11-210ENST00000547654 BCL2A1Q16548 175 aa3□□□□□ -1.93
SCAF11-210ENST00000547654 ACTBL2Q562R1 376 aa3□□□□□ -1.93
SCAF11-210ENST00000547654 OPN5Q6U736 354 aa3□□□□□ -1.93
SCAF11-210ENST00000547654 Q6ZSR6 202 aa3□□□□□ -1.93
SCAF11-210ENST00000547654 KRTAP5-5Q701N2 237 aaPredicted RBP3□□□□□ -1.93
SCAF11-210ENST00000547654 C6orf120Q7Z4R8 191 aa3□□□□□ -1.93
SCAF11-210ENST00000547654 MDP1Q86V88 176 aa3□□□□□ -1.93
SCAF11-210ENST00000547654 BLIDQ8IZY5 108 aa3□□□□□ -1.93
SCAF11-210ENST00000547654 Q8N402 240 aa3□□□□□ -1.93
SCAF11-210ENST00000547654 C2orf73Q8N5S3 287 aaPredicted RBP3□□□□□ -1.93
SCAF11-210ENST00000547654 DCAKDQ8WVC6 231 aa3□□□□□ -1.93
SCAF11-210ENST00000547654 SMARCD1Q96GM5 515 aa3□□□□□ -1.93
SCAF11-210ENST00000547654 BIRC8Q96P09 236 aa3□□□□□ -1.93
SCAF11-210ENST00000547654 QKIQ96PU8 341 aaKnown RBP eCLIP3□□□□□ -1.93
SCAF11-210ENST00000547654 TAAR1Q96RJ0 339 aa3□□□□□ -1.93
SCAF11-210ENST00000547654 CAMK2N2Q96S95 79 aa3□□□□□ -1.93
SCAF11-210ENST00000547654 HDHD3Q9BSH5 251 aaPredicted RBP3□□□□□ -1.93
SCAF11-210ENST00000547654 FAAP24Q9BTP7 215 aa3□□□□□ -1.93
SCAF11-210ENST00000547654 TAPBPLQ9BX59 468 aa3□□□□□ -1.93
SCAF11-210ENST00000547654 SLC19A3Q9BZV2 496 aa3□□□□□ -1.93
SCAF11-210ENST00000547654 CDC42EP4Q9H3Q1 356 aaKnown RBP3□□□□□ -1.93
SCAF11-210ENST00000547654 MFSD1Q9H3U5 465 aa3□□□□□ -1.93
SCAF11-210ENST00000547654 SLC40A1Q9NP59 571 aa3□□□□□ -1.93
SCAF11-210ENST00000547654 FBXO6Q9NRD1 293 aaPredicted RBP3□□□□□ -1.93
SCAF11-210ENST00000547654 RBM22Q9NW64 420 aaKnown RBP eCLIP3□□□□□ -1.93
SCAF11-210ENST00000547654 C3orf18Q9UK00 162 aa3□□□□□ -1.93
SCAF11-210ENST00000547654 TBL2Q9Y4P3 447 aaKnown RBP3□□□□□ -1.93
SCAF11-210ENST00000547654 ENPP4Q9Y6X5 453 aa3□□□□□ -1.93
SCAF11-210ENST00000547654 SPEGQ15772 3267 aa3□□□□□ -1.93
SCAF11-210ENST00000547654 ZNF609O15014 1411 aa3□□□□□ -1.93
SCAF11-210ENST00000547654 EIF3AQ14152 1382 aaKnown RBP3□□□□□ -1.93
SCAF11-210ENST00000547654 WDR87Q6ZQQ6 2873 aa2.99□□□□□ -1.93
SCAF11-210ENST00000547654 MAP3K15Q6ZN16 1313 aa2.99□□□□□ -1.93
SCAF11-210ENST00000547654 IGKV1-8A0A0C4DH67 115 aa2.99□□□□□ -1.93
SCAF11-210ENST00000547654 DAPL1A0PJW8 107 aa2.99□□□□□ -1.93
SCAF11-210ENST00000547654 OR2AT4A6NND4 320 aa2.99□□□□□ -1.93
SCAF11-210ENST00000547654 A8MU10 97 aa2.99□□□□□ -1.93
SCAF11-210ENST00000547654 NDUFC2-KCTD14E9PQ53 114 aa2.99□□□□□ -1.93
SCAF11-210ENST00000547654 I3L4J1 428 aa2.99□□□□□ -1.93
SCAF11-210ENST00000547654 UPK2O00526 184 aa2.99□□□□□ -1.93
SCAF11-210ENST00000547654 PHYHO14832 338 aa2.99□□□□□ -1.93
SCAF11-210ENST00000547654 CD5LO43866 347 aa2.99□□□□□ -1.93
SCAF11-210ENST00000547654 CA11O75493 328 aa2.99□□□□□ -1.93
SCAF11-210ENST00000547654 TRBV12-3P01733 135 aa2.99□□□□□ -1.93
SCAF11-210ENST00000547654 CDK1P06493 297 aa2.99□□□□□ -1.93
SCAF11-210ENST00000547654 MRPL3P09001 348 aaKnown RBP2.99□□□□□ -1.93
SCAF11-210ENST00000547654 TCN2P20062 427 aa2.99□□□□□ -1.93
SCAF11-210ENST00000547654 ZBTB25P24278 435 aa2.99□□□□□ -1.93
SCAF11-210ENST00000547654 GRPRP30550 384 aa2.99□□□□□ -1.93
SCAF11-210ENST00000547654 PRSS3P35030 304 aa2.99□□□□□ -1.93
SCAF11-210ENST00000547654 ACOT2P49753 483 aa2.99□□□□□ -1.93
SCAF11-210ENST00000547654 CCL23P55773 120 aa2.99□□□□□ -1.93
SCAF11-210ENST00000547654 HBG1P69891 147 aa2.99□□□□□ -1.93
SCAF11-210ENST00000547654 HBG2P69892 147 aa2.99□□□□□ -1.93
SCAF11-210ENST00000547654 CRADDP78560 199 aa2.99□□□□□ -1.93
SCAF11-210ENST00000547654 PRDX1Q06830 199 aaKnown RBP2.99□□□□□ -1.93
SCAF11-210ENST00000547654 CLEC12BQ2HXU8 276 aa2.99□□□□□ -1.93
SCAF11-210ENST00000547654 TBC1D28Q2M2D7 210 aa2.99□□□□□ -1.93
SCAF11-210ENST00000547654 CEACAM16Q2WEN9 425 aa2.99□□□□□ -1.93
SCAF11-210ENST00000547654 FAM92BQ6ZTR7 304 aa2.99□□□□□ -1.93
SCAF11-210ENST00000547654 DCAF4L2Q8NA75 395 aa2.99□□□□□ -1.93
SCAF11-210ENST00000547654 OR1J4Q8NGS1 313 aa2.99□□□□□ -1.93
SCAF11-210ENST00000547654 SYNPRQ8TBG9 265 aa2.99□□□□□ -1.93
SCAF11-210ENST00000547654 ENKURQ8TC29 256 aa2.99□□□□□ -1.93
SCAF11-210ENST00000547654 ESR2Q92731 530 aa2.99□□□□□ -1.93
SCAF11-210ENST00000547654 RDH5Q92781 318 aa2.99□□□□□ -1.93
SCAF11-210ENST00000547654 PTX4Q96A99 478 aa2.99□□□□□ -1.93
SCAF11-210ENST00000547654 SMIM12Q96EX1 92 aa2.99□□□□□ -1.93
SCAF11-210ENST00000547654 SNF8Q96H20 258 aa2.99□□□□□ -1.93
SCAF11-210ENST00000547654 KCNS1Q96KK3 526 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms