RNA–Protein interactions for RNA: ENST00000547338.5

RBFOX1-207, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-207ENST00000547338 MFFQ9GZY8 342 aa14.68□□□□□ -0.06
RBFOX1-207ENST00000547338 MED9Q9NWA0 146 aa14.68□□□□□ -0.06
RBFOX1-207ENST00000547338 LAMP3Q9UQV4 416 aa14.68□□□□□ -0.06
RBFOX1-207ENST00000547338 NIPBLQ6KC79 2804 aaeCLIP14.67□□□□□ -0.06
RBFOX1-207ENST00000547338 A0A096LPE4 126 aa14.67□□□□□ -0.06
RBFOX1-207ENST00000547338 A0A1W2PPZ6 126 aa14.67□□□□□ -0.06
RBFOX1-207ENST00000547338 E7EQL1 145 aa14.67□□□□□ -0.06
RBFOX1-207ENST00000547338 M0R1B8 84 aa14.67□□□□□ -0.06
RBFOX1-207ENST00000547338 CD99P14209 185 aa14.67□□□□□ -0.06
RBFOX1-207ENST00000547338 PTAFRP25105 342 aa14.67□□□□□ -0.06
RBFOX1-207ENST00000547338 AP2S1P53680 142 aaPredicted RBP14.67□□□□□ -0.06
RBFOX1-207ENST00000547338 NHLRC3Q5JS37 347 aa14.67□□□□□ -0.06
RBFOX1-207ENST00000547338 PLCXD3Q63HM9 321 aa14.67□□□□□ -0.06
RBFOX1-207ENST00000547338 ELP2Q6IA86 826 aa14.67□□□□□ -0.06
RBFOX1-207ENST00000547338 C11orf87Q6NUJ2 197 aa14.67□□□□□ -0.06
RBFOX1-207ENST00000547338 TMEM108Q6UXF1 575 aa14.67□□□□□ -0.06
RBFOX1-207ENST00000547338 GSG1LQ6UXU4 331 aa14.67□□□□□ -0.06
RBFOX1-207ENST00000547338 ZNF546Q86UE3 836 aa14.67□□□□□ -0.06
RBFOX1-207ENST00000547338 OR10K1Q8NGX5 313 aa14.67□□□□□ -0.06
RBFOX1-207ENST00000547338 PIGCQ92535 297 aa14.67□□□□□ -0.06
RBFOX1-207ENST00000547338 HEATR1Q9H583 2144 aaKnown RBP14.67□□□□□ -0.06
RBFOX1-207ENST00000547338 RHOFQ9HBH0 211 aa14.67□□□□□ -0.06
RBFOX1-207ENST00000547338 TMEM165Q9HC07 324 aa14.67□□□□□ -0.06
RBFOX1-207ENST00000547338 NSD1Q96L73 2696 aaPredicted RBP14.67□□□□□ -0.06
RBFOX1-207ENST00000547338 C2CD3Q4AC94 2353 aa14.67□□□□□ -0.06
RBFOX1-207ENST00000547338 ZFHX3Q15911 3703 aa14.67□□□□□ -0.06
RBFOX1-207ENST00000547338 FXYD6-FXYD2A0A087WZ82 144 aa14.66□□□□□ -0.06
RBFOX1-207ENST00000547338 ARPC5O15511 151 aa14.66□□□□□ -0.06
RBFOX1-207ENST00000547338 AKR1C4P17516 323 aa14.66□□□□□ -0.06
RBFOX1-207ENST00000547338 CHATP28329 748 aa14.66□□□□□ -0.06
RBFOX1-207ENST00000547338 RAB1AP62820 205 aa14.66□□□□□ -0.06
RBFOX1-207ENST00000547338 CEACAM21Q3KPI0 293 aa14.66□□□□□ -0.06
RBFOX1-207ENST00000547338 DHRS11Q6UWP2 260 aa14.66□□□□□ -0.06
RBFOX1-207ENST00000547338 MYPOPQ86VE0 399 aaPredicted RBP14.66□□□□□ -0.06
RBFOX1-207ENST00000547338 OR5A2Q8NGI9 324 aa14.66□□□□□ -0.06
RBFOX1-207ENST00000547338 ANGPTL6Q8NI99 470 aa14.66□□□□□ -0.06
RBFOX1-207ENST00000547338 SCARB1Q8WTV0 552 aa14.66□□□□□ -0.06
RBFOX1-207ENST00000547338 POM121L2Q96KW2 1035 aa14.66□□□□□ -0.06
RBFOX1-207ENST00000547338 VRK1Q99986 396 aaPredicted RBP14.66□□□□□ -0.06
RBFOX1-207ENST00000547338 ARL6Q9H0F7 186 aa14.66□□□□□ -0.06
RBFOX1-207ENST00000547338 FXYD6Q9H0Q3 95 aa14.66□□□□□ -0.06
RBFOX1-207ENST00000547338 C5orf66Q9H5L9 145 aa14.66□□□□□ -0.06
RBFOX1-207ENST00000547338 CISD1Q9NZ45 108 aaKnown RBP14.66□□□□□ -0.06
RBFOX1-207ENST00000547338 EHFQ9NZC4 300 aa14.66□□□□□ -0.06
RBFOX1-207ENST00000547338 ANXA10Q9UJ72 324 aa14.66□□□□□ -0.06
RBFOX1-207ENST00000547338 C14orf166Q9Y224 244 aaKnown RBP14.66□□□□□ -0.06
RBFOX1-207ENST00000547338 TLN2Q9Y4G6 2542 aa14.66□□□□□ -0.06
RBFOX1-207ENST00000547338 IGKV1-27A0A075B6S5 117 aa14.66□□□□□ -0.06
RBFOX1-207ENST00000547338 LOC100509620A0A075B734 347 aa14.66□□□□□ -0.06
RBFOX1-207ENST00000547338 IGHV1-18A0A0C4DH31 117 aa14.66□□□□□ -0.06
RBFOX1-207ENST00000547338 A0A1B0GW55 424 aa14.66□□□□□ -0.06
RBFOX1-207ENST00000547338 POM121CA8CG34 1229 aa14.66□□□□□ -0.06
RBFOX1-207ENST00000547338 DUX4L2P0CJ85 424 aa14.66□□□□□ -0.06
RBFOX1-207ENST00000547338 DUX4L3P0CJ86 424 aa14.66□□□□□ -0.06
RBFOX1-207ENST00000547338 DUX4L4P0CJ87 422 aa14.66□□□□□ -0.06
RBFOX1-207ENST00000547338 DUX4L5P0CJ88 424 aa14.66□□□□□ -0.06
RBFOX1-207ENST00000547338 DUX4L6P0CJ89 424 aa14.66□□□□□ -0.06
RBFOX1-207ENST00000547338 DUX4L7P0CJ90 424 aa14.66□□□□□ -0.06
RBFOX1-207ENST00000547338 GABRR1P24046 479 aa14.66□□□□□ -0.06
RBFOX1-207ENST00000547338 APLNRP35414 380 aa14.66□□□□□ -0.06
RBFOX1-207ENST00000547338 C1QTNF12Q5T7M4 302 aa14.66□□□□□ -0.06
RBFOX1-207ENST00000547338 SHEQ5VZ18 495 aa14.66□□□□□ -0.06
RBFOX1-207ENST00000547338 MRPL21Q7Z2W9 205 aaKnown RBP14.66□□□□□ -0.06
RBFOX1-207ENST00000547338 DTX2Q86UW9 622 aa14.66□□□□□ -0.06
RBFOX1-207ENST00000547338 MKXQ8IYA7 352 aa14.66□□□□□ -0.06
RBFOX1-207ENST00000547338 KCNRGQ8N5I3 272 aa14.66□□□□□ -0.06
RBFOX1-207ENST00000547338 OR13G1Q8NGZ3 307 aa14.66□□□□□ -0.06
RBFOX1-207ENST00000547338 OR51F2Q8NH61 342 aa14.66□□□□□ -0.06
RBFOX1-207ENST00000547338 THAP6Q8TBB0 222 aa14.66□□□□□ -0.06
RBFOX1-207ENST00000547338 TMEM171Q8WVE6 324 aa14.66□□□□□ -0.06
RBFOX1-207ENST00000547338 HIST1H2AAQ96QV6 131 aa14.66□□□□□ -0.06
RBFOX1-207ENST00000547338 CMSS1Q9BQ75 279 aaKnown RBP14.66□□□□□ -0.06
RBFOX1-207ENST00000547338 PLK3Q9H4B4 646 aa14.66□□□□□ -0.06
RBFOX1-207ENST00000547338 NECAP2Q9NVZ3 263 aa14.66□□□□□ -0.06
RBFOX1-207ENST00000547338 DUX4Q9UBX2 424 aa14.66□□□□□ -0.06
RBFOX1-207ENST00000547338 MPC1Q9Y5U8 109 aa14.66□□□□□ -0.06
RBFOX1-207ENST00000547338 PQLC2LA1A4F0 135 aa14.65□□□□□ -0.06
RBFOX1-207ENST00000547338 PDCD6O75340 191 aa14.65□□□□□ -0.06
RBFOX1-207ENST00000547338 CTSDP07339 412 aaPredicted RBP14.65□□□□□ -0.06
RBFOX1-207ENST00000547338 FUT3P21217 361 aa14.65□□□□□ -0.06
RBFOX1-207ENST00000547338 VAMP1P23763 118 aa14.65□□□□□ -0.06
RBFOX1-207ENST00000547338 ARPC4P59998 168 aa14.65□□□□□ -0.06
RBFOX1-207ENST00000547338 AADACL3Q5VUY0 350 aa14.65□□□□□ -0.06
RBFOX1-207ENST00000547338 C11orf71Q6IPW1 123 aa14.65□□□□□ -0.06
RBFOX1-207ENST00000547338 Q6ZS49 121 aa14.65□□□□□ -0.06
RBFOX1-207ENST00000547338 ACOT7LQ6ZUV0 252 aa14.65□□□□□ -0.06
RBFOX1-207ENST00000547338 C6orf201Q7Z4U5 140 aa14.65□□□□□ -0.06
RBFOX1-207ENST00000547338 LINC00596Q86U02 117 aa14.65□□□□□ -0.06
RBFOX1-207ENST00000547338 CIARTQ8N365 385 aaPredicted RBP14.65□□□□□ -0.06
RBFOX1-207ENST00000547338 ADAD2Q8NCV1 583 aaKnown RBP14.65□□□□□ -0.06
RBFOX1-207ENST00000547338 WDR89Q96FK6 387 aaPredicted RBP14.65□□□□□ -0.06
RBFOX1-207ENST00000547338 FN3KRPQ9HA64 309 aa14.65□□□□□ -0.06
RBFOX1-207ENST00000547338 OBP2BQ9NPH6 170 aa14.65□□□□□ -0.06
RBFOX1-207ENST00000547338 TNFSF18Q9UNG2 199 aa14.65□□□□□ -0.06
RBFOX1-207ENST00000547338 TRAV14DV4A0A0A6YYC5 116 aa14.64□□□□□ -0.07
RBFOX1-207ENST00000547338 C5orf49A4QMS7 147 aa14.64□□□□□ -0.07
RBFOX1-207ENST00000547338 LEUTXA8MZ59 168 aa14.64□□□□□ -0.07
RBFOX1-207ENST00000547338 ATP6V1G2-DDX39BF2Z307 99 aa14.64□□□□□ -0.07
RBFOX1-207ENST00000547338 IGLV1-44P01699 117 aa14.64□□□□□ -0.07
RBFOX1-207ENST00000547338 GLAP06280 429 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms