RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 OR51E2Q9H255 320 aa11.87□□□□□ -0.51
DDX54-203ENST00000546869 PPA2Q9H2U2 334 aa11.87□□□□□ -0.51
DDX54-203ENST00000546869 PRDM13Q9H4Q3 707 aa11.87□□□□□ -0.51
DDX54-203ENST00000546869 PLGRKTQ9HBL7 147 aa11.87□□□□□ -0.51
DDX54-203ENST00000546869 TAS2R3Q9NYW6 316 aa11.87□□□□□ -0.51
DDX54-203ENST00000546869 STEAP1Q9UHE8 339 aa11.87□□□□□ -0.51
DDX54-203ENST00000546869 MXRA5Q9NR99 2828 aa11.87□□□□□ -0.51
DDX54-203ENST00000546869 TRAV40A0A0B4J280 105 aa11.86□□□□□ -0.51
DDX54-203ENST00000546869 ODAMA1E959 279 aa11.86□□□□□ -0.51
DDX54-203ENST00000546869 LDLRAD4O15165 306 aa11.86□□□□□ -0.51
DDX54-203ENST00000546869 TMEM127O75204 238 aa11.86□□□□□ -0.51
DDX54-203ENST00000546869 CA11O75493 328 aa11.86□□□□□ -0.51
DDX54-203ENST00000546869 CGB3P0DN86 165 aa11.86□□□□□ -0.51
DDX54-203ENST00000546869 CGB7P0DN87 165 aa11.86□□□□□ -0.51
DDX54-203ENST00000546869 FUT3P21217 361 aa11.86□□□□□ -0.51
DDX54-203ENST00000546869 GADD45AP24522 165 aa11.86□□□□□ -0.51
DDX54-203ENST00000546869 GLIPR1P48060 266 aa11.86□□□□□ -0.51
DDX54-203ENST00000546869 UBE2E1P51965 193 aa11.86□□□□□ -0.51
DDX54-203ENST00000546869 RBM39Q14498 530 aaKnown RBP11.86□□□□□ -0.51
DDX54-203ENST00000546869 EDDM3AQ14507 147 aa11.86□□□□□ -0.51
DDX54-203ENST00000546869 RAB11BQ15907 218 aa11.86□□□□□ -0.51
DDX54-203ENST00000546869 KRBOX4Q5JUW0 171 aa11.86□□□□□ -0.51
DDX54-203ENST00000546869 SLC35E4Q6ICL7 350 aa11.86□□□□□ -0.51
DDX54-203ENST00000546869 TCF23Q7RTU1 214 aa11.86□□□□□ -0.51
DDX54-203ENST00000546869 FAM89BQ8N5H3 189 aa11.86□□□□□ -0.51
DDX54-203ENST00000546869 FAM3DQ96BQ1 224 aa11.86□□□□□ -0.51
DDX54-203ENST00000546869 ZNF714Q96N38 554 aa11.86□□□□□ -0.51
DDX54-203ENST00000546869 BANF2Q9H503 90 aa11.86□□□□□ -0.51
DDX54-203ENST00000546869 HEXA-AS1Q9H8Q6 139 aa11.86□□□□□ -0.51
DDX54-203ENST00000546869 OR6C3Q9NZP0 311 aa11.86□□□□□ -0.51
DDX54-203ENST00000546869 ZNF69Q9UC07 566 aa11.86□□□□□ -0.51
DDX54-203ENST00000546869 C2CD3Q4AC94 2353 aa11.86□□□□□ -0.51
DDX54-203ENST00000546869 TRGV10A0A0A0MS01 117 aa11.85□□□□□ -0.51
DDX54-203ENST00000546869 IGHV1-69DA0A0B4J2H0 117 aa11.85□□□□□ -0.51
DDX54-203ENST00000546869 NOTOA8MTQ0 251 aa11.85□□□□□ -0.51
DDX54-203ENST00000546869 RNASEK-C17orf49H0YIS7 233 aa11.85□□□□□ -0.51
DDX54-203ENST00000546869 AIPO00170 330 aa11.85□□□□□ -0.51
DDX54-203ENST00000546869 IGHV1-69P01742 117 aa11.85□□□□□ -0.51
DDX54-203ENST00000546869 SMIM18P0DKX4 95 aa11.85□□□□□ -0.51
DDX54-203ENST00000546869 CCL3L1P16619 93 aa11.85□□□□□ -0.51
DDX54-203ENST00000546869 ERVFRD-1P60508 538 aa11.85□□□□□ -0.51
DDX54-203ENST00000546869 UNC119Q13432 240 aa11.85□□□□□ -0.51
DDX54-203ENST00000546869 C2orf76Q3KRA6 126 aa11.85□□□□□ -0.51
DDX54-203ENST00000546869 RSBN1Q5VWQ0 802 aaPredicted RBP11.85□□□□□ -0.51
DDX54-203ENST00000546869 GAPTQ8N292 157 aa11.85□□□□□ -0.51
DDX54-203ENST00000546869 BPIFB2Q8N4F0 458 aa11.85□□□□□ -0.51
DDX54-203ENST00000546869 TPRX1Q8N7U7 411 aa11.85□□□□□ -0.51
DDX54-203ENST00000546869 ZNF565Q8N9K5 539 aa11.85□□□□□ -0.51
DDX54-203ENST00000546869 OR13F1Q8NGS4 319 aa11.85□□□□□ -0.51
DDX54-203ENST00000546869 ZNF418Q8TF45 676 aaPredicted RBP11.85□□□□□ -0.51
DDX54-203ENST00000546869 LHX4Q969G2 390 aa11.85□□□□□ -0.51
DDX54-203ENST00000546869 PTX4Q96A99 478 aa11.85□□□□□ -0.51
DDX54-203ENST00000546869 CHCHD6Q9BRQ6 235 aa11.85□□□□□ -0.51
DDX54-203ENST00000546869 SUCNR1Q9BXA5 334 aa11.85□□□□□ -0.51
DDX54-203ENST00000546869 TMEM59Q9BXS4 323 aa11.85□□□□□ -0.51
DDX54-203ENST00000546869 MRPS26Q9BYN8 205 aaKnown RBP11.85□□□□□ -0.51
DDX54-203ENST00000546869 MS4A7Q9GZW8 240 aaPredicted RBP11.85□□□□□ -0.51
DDX54-203ENST00000546869 LINC00574Q9H8X3 128 aa11.85□□□□□ -0.51
DDX54-203ENST00000546869 MCRIP1C9JLW8 97 aa11.84□□□□□ -0.51
DDX54-203ENST00000546869 PDCD6O75340 191 aa11.84□□□□□ -0.51
DDX54-203ENST00000546869 MPIG6BO95866 241 aa11.84□□□□□ -0.51
DDX54-203ENST00000546869 ATXN7L3Q14CW9 347 aaPredicted RBP11.84□□□□□ -0.51
DDX54-203ENST00000546869 FAM189A2Q15884 450 aa11.84□□□□□ -0.51
DDX54-203ENST00000546869 ATAD3CQ5T2N8 411 aa11.84□□□□□ -0.51
DDX54-203ENST00000546869 SIGIRRQ6IA17 410 aa11.84□□□□□ -0.51
DDX54-203ENST00000546869 HCP5Q6MZN7 132 aa11.84□□□□□ -0.51
DDX54-203ENST00000546869 NR2C2APQ86WQ0 139 aa11.84□□□□□ -0.51
DDX54-203ENST00000546869 OR51D1Q8NGF3 324 aa11.84□□□□□ -0.51
DDX54-203ENST00000546869 PLPPR1Q8TBJ4 325 aa11.84□□□□□ -0.51
DDX54-203ENST00000546869 FAM46BQ96A09 425 aa11.84□□□□□ -0.51
DDX54-203ENST00000546869 URM1Q9BTM9 101 aaKnown RBP11.84□□□□□ -0.51
DDX54-203ENST00000546869 GAL3ST2Q9H3Q3 398 aa11.84□□□□□ -0.51
DDX54-203ENST00000546869 SIRT7Q9NRC8 400 aa11.84□□□□□ -0.51
DDX54-203ENST00000546869 ZNF581Q9P0T4 197 aa11.84□□□□□ -0.51
DDX54-203ENST00000546869 JMJD1CQ15652 2540 aa11.84□□□□□ -0.51
DDX54-203ENST00000546869 ZNF729A6NN14 1252 aaPredicted RBP11.83□□□□□ -0.52
DDX54-203ENST00000546869 TCF21O43680 179 aa11.83□□□□□ -0.52
DDX54-203ENST00000546869 AIREO43918 545 aa11.83□□□□□ -0.52
DDX54-203ENST00000546869 IGHV1-8P0DP01 117 aa11.83□□□□□ -0.52
DDX54-203ENST00000546869 GZMHP20718 246 aa11.83□□□□□ -0.52
DDX54-203ENST00000546869 SDC2P34741 201 aa11.83□□□□□ -0.52
DDX54-203ENST00000546869 OR10A3P58181 314 aa11.83□□□□□ -0.52
DDX54-203ENST00000546869 HILS1P60008 231 aa11.83□□□□□ -0.52
DDX54-203ENST00000546869 P2RY14Q15391 338 aa11.83□□□□□ -0.52
DDX54-203ENST00000546869 OR10K2Q6IF99 312 aa11.83□□□□□ -0.52
DDX54-203ENST00000546869 RAB12Q6IQ22 244 aa11.83□□□□□ -0.52
DDX54-203ENST00000546869 HEPN1Q6WQI6 88 aa11.83□□□□□ -0.52
DDX54-203ENST00000546869 ZNF497Q6ZNH5 498 aa11.83□□□□□ -0.52
DDX54-203ENST00000546869 JMJD8Q96S16 334 aa11.83□□□□□ -0.52
DDX54-203ENST00000546869 CENPOQ9BU64 300 aa11.83□□□□□ -0.52
DDX54-203ENST00000546869 LPAR5Q9H1C0 372 aa11.83□□□□□ -0.52
DDX54-203ENST00000546869 OCEL1Q9H607 264 aa11.83□□□□□ -0.52
DDX54-203ENST00000546869 KIF25Q9UIL4 384 aa11.83□□□□□ -0.52
DDX54-203ENST00000546869 RAB22AQ9UL26 194 aa11.83□□□□□ -0.52
DDX54-203ENST00000546869 PEX16Q9Y5Y5 336 aa11.83□□□□□ -0.52
DDX54-203ENST00000546869 MEIKINA0A087WXM9 373 aa11.82□□□□□ -0.52
DDX54-203ENST00000546869 LOC100506127A0A0U1RQW1 187 aa11.82□□□□□ -0.52
DDX54-203ENST00000546869 KBTBD11-OT1A0A1B0GTJ5 212 aa11.82□□□□□ -0.52
DDX54-203ENST00000546869 TMEM30CPA0ZSE6 113 aa11.82□□□□□ -0.52
DDX54-203ENST00000546869 POM121CA8CG34 1229 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms