RNA–Protein interactions for RNA: ENST00000546588.1

VPS29-203, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-203ENST00000546588 KMT2BQ9UMN6 2715 aaPredicted RBP7.14□□□□□ -1.27
VPS29-203ENST00000546588 RELNP78509 3460 aa7.13□□□□□ -1.27
VPS29-203ENST00000546588 TRAV34A0A0B4J273 112 aa7.13□□□□□ -1.27
VPS29-203ENST00000546588 IGKV1-12A0A0C4DH73 117 aa7.13□□□□□ -1.27
VPS29-203ENST00000546588 LRP5LA4QPB2 252 aa7.13□□□□□ -1.27
VPS29-203ENST00000546588 METTL21EPA6NDL7 271 aa7.13□□□□□ -1.27
VPS29-203ENST00000546588 BTBD17A6NE02 478 aa7.13□□□□□ -1.27
VPS29-203ENST00000546588 DPRXA6NFQ7 191 aa7.13□□□□□ -1.27
VPS29-203ENST00000546588 ZNF850A8MQ14 1090 aa7.13□□□□□ -1.27
VPS29-203ENST00000546588 FAM25AB3EWG3 89 aa7.13□□□□□ -1.27
VPS29-203ENST00000546588 FAM25CB3EWG5 89 aa7.13□□□□□ -1.27
VPS29-203ENST00000546588 FAM25GB3EWG6 89 aa7.13□□□□□ -1.27
VPS29-203ENST00000546588 H7C1Q1 480 aa7.13□□□□□ -1.27
VPS29-203ENST00000546588 MFNGO00587 321 aa7.13□□□□□ -1.27
VPS29-203ENST00000546588 MLNRO43193 412 aa7.13□□□□□ -1.27
VPS29-203ENST00000546588 IGKV1D-12P01611 117 aa7.13□□□□□ -1.27
VPS29-203ENST00000546588 ZNF735P0CB33 412 aa7.13□□□□□ -1.27
VPS29-203ENST00000546588 CPT2P23786 658 aa7.13□□□□□ -1.27
VPS29-203ENST00000546588 MPV17P39210 176 aa7.13□□□□□ -1.27
VPS29-203ENST00000546588 MTCP1P56278 107 aa7.13□□□□□ -1.27
VPS29-203ENST00000546588 ATP5IP56385 69 aaPredicted RBP7.13□□□□□ -1.27
VPS29-203ENST00000546588 TAS2R20P59543 309 aa7.13□□□□□ -1.27
VPS29-203ENST00000546588 ERVS71-1P61550 626 aa7.13□□□□□ -1.27
VPS29-203ENST00000546588 GNG3P63215 75 aa7.13□□□□□ -1.27
VPS29-203ENST00000546588 IL18Q14116 193 aa7.13□□□□□ -1.27
VPS29-203ENST00000546588 ARL6IP1Q15041 203 aa7.13□□□□□ -1.27
VPS29-203ENST00000546588 CDSNQ15517 529 aa7.13□□□□□ -1.27
VPS29-203ENST00000546588 HFEQ30201 348 aa7.13□□□□□ -1.27
VPS29-203ENST00000546588 ZNF260Q3ZCT1 412 aa7.13□□□□□ -1.27
VPS29-203ENST00000546588 PLA1AQ53H76 456 aa7.13□□□□□ -1.27
VPS29-203ENST00000546588 TMEM69Q5SWH9 247 aa7.13□□□□□ -1.27
VPS29-203ENST00000546588 PLCXD3Q63HM9 321 aa7.13□□□□□ -1.27
VPS29-203ENST00000546588 RGS7BPQ6MZT1 257 aaPredicted RBP7.13□□□□□ -1.27
VPS29-203ENST00000546588 TRAT1Q6PIZ9 186 aa7.13□□□□□ -1.27
VPS29-203ENST00000546588 C1QL2Q7Z5L3 287 aa7.13□□□□□ -1.27
VPS29-203ENST00000546588 MOGAT3Q86VF5 341 aa7.13□□□□□ -1.27
VPS29-203ENST00000546588 ZNF573Q86YE8 665 aa7.13□□□□□ -1.27
VPS29-203ENST00000546588 Q8IYB0 196 aa7.13□□□□□ -1.27
VPS29-203ENST00000546588 Q8N402 240 aa7.13□□□□□ -1.27
VPS29-203ENST00000546588 TMEM104Q8NE00 496 aa7.13□□□□□ -1.27
VPS29-203ENST00000546588 GRPEL2Q8TAA5 225 aa7.13□□□□□ -1.27
VPS29-203ENST00000546588 GPX8Q8TED1 209 aa7.13□□□□□ -1.27
VPS29-203ENST00000546588 MITD1Q8WV92 249 aa7.13□□□□□ -1.27
VPS29-203ENST00000546588 ITLN2Q8WWU7 325 aaPredicted RBP7.13□□□□□ -1.27
VPS29-203ENST00000546588 CFHR4Q92496 578 aa7.13□□□□□ -1.27
VPS29-203ENST00000546588 MRPL24Q96A35 216 aaKnown RBP7.13□□□□□ -1.27
VPS29-203ENST00000546588 CMBLQ96DG6 245 aa7.13□□□□□ -1.27
VPS29-203ENST00000546588 C7orf50Q9BRJ6 194 aaKnown RBP7.13□□□□□ -1.27
VPS29-203ENST00000546588 TMEM59Q9BXS4 323 aa7.13□□□□□ -1.27
VPS29-203ENST00000546588 SLC5A7Q9GZV3 580 aa7.13□□□□□ -1.27
VPS29-203ENST00000546588 HES4Q9HCC6 221 aa7.13□□□□□ -1.27
VPS29-203ENST00000546588 CHMP1AQ9HD42 196 aaPredicted RBP7.13□□□□□ -1.27
VPS29-203ENST00000546588 NGBQ9NPG2 151 aa7.13□□□□□ -1.27
VPS29-203ENST00000546588 PCDHB16Q9NRJ7 776 aa7.13□□□□□ -1.27
VPS29-203ENST00000546588 RCC2Q9P258 522 aaKnown RBP7.13□□□□□ -1.27
VPS29-203ENST00000546588 ERRFI1Q9UJM3 462 aaPredicted RBP7.13□□□□□ -1.27
VPS29-203ENST00000546588 ARFGEF3Q5TH69 2177 aa7.12□□□□□ -1.27
VPS29-203ENST00000546588 IGSF10Q6WRI0 2623 aa7.12□□□□□ -1.27
VPS29-203ENST00000546588 A0A0A6YYD4 124 aa7.12□□□□□ -1.27
VPS29-203ENST00000546588 A0A1W2PQ09 198 aa7.12□□□□□ -1.27
VPS29-203ENST00000546588 C9orf118A6NHY6 69 aa7.12□□□□□ -1.27
VPS29-203ENST00000546588 SHISA9B4DS77 424 aa7.12□□□□□ -1.27
VPS29-203ENST00000546588 H7C417 338 aa7.12□□□□□ -1.27
VPS29-203ENST00000546588 J3QT63 122 aa7.12□□□□□ -1.27
VPS29-203ENST00000546588 M0R1B8 84 aa7.12□□□□□ -1.27
VPS29-203ENST00000546588 PLA2G10O15496 165 aa7.12□□□□□ -1.27
VPS29-203ENST00000546588 C1QL1O75973 258 aa7.12□□□□□ -1.27
VPS29-203ENST00000546588 CD55P08174 381 aa7.12□□□□□ -1.27
VPS29-203ENST00000546588 MGMTP16455 207 aa7.12□□□□□ -1.27
VPS29-203ENST00000546588 CEBPDP49716 269 aaPredicted RBP7.12□□□□□ -1.27
VPS29-203ENST00000546588 ZNF83P51522 516 aa7.12□□□□□ -1.27
VPS29-203ENST00000546588 FGF12P61328 243 aa7.12□□□□□ -1.27
VPS29-203ENST00000546588 PAX5Q02548 391 aa7.12□□□□□ -1.27
VPS29-203ENST00000546588 SCN1BQ07699 218 aa7.12□□□□□ -1.27
VPS29-203ENST00000546588 SNTB2Q13425 540 aaKnown RBP7.12□□□□□ -1.27
VPS29-203ENST00000546588 KLF9Q13886 244 aaPredicted RBP7.12□□□□□ -1.27
VPS29-203ENST00000546588 EFNB3Q15768 340 aa7.12□□□□□ -1.27
VPS29-203ENST00000546588 USF2Q15853 346 aaPredicted RBP7.12□□□□□ -1.27
VPS29-203ENST00000546588 PNLIPRP3Q17RR3 467 aa7.12□□□□□ -1.27
VPS29-203ENST00000546588 OR2T2Q6IF00 324 aa7.12□□□□□ -1.27
VPS29-203ENST00000546588 ADAM5Q6NVV9 412 aa7.12□□□□□ -1.27
VPS29-203ENST00000546588 Q6ZR03 302 aa7.12□□□□□ -1.27
VPS29-203ENST00000546588 MOB3CQ70IA8 216 aa7.12□□□□□ -1.27
VPS29-203ENST00000546588 WDR86Q86TI4 376 aa7.12□□□□□ -1.27
VPS29-203ENST00000546588 MKXQ8IYA7 352 aa7.12□□□□□ -1.27
VPS29-203ENST00000546588 ZNF611Q8N823 705 aa7.12□□□□□ -1.27
VPS29-203ENST00000546588 OR56B1Q8NGI3 324 aa7.12□□□□□ -1.27
VPS29-203ENST00000546588 OR10R2Q8NGX6 335 aa7.12□□□□□ -1.27
VPS29-203ENST00000546588 TNFAIP8L1Q8WVP5 186 aa7.12□□□□□ -1.27
VPS29-203ENST00000546588 PIGCQ92535 297 aa7.12□□□□□ -1.27
VPS29-203ENST00000546588 FAM46BQ96A09 425 aa7.12□□□□□ -1.27
VPS29-203ENST00000546588 WFIKKN1Q96NZ8 548 aa7.12□□□□□ -1.27
VPS29-203ENST00000546588 BBC3Q96PG8 261 aaPredicted RBP7.12□□□□□ -1.27
VPS29-203ENST00000546588 SPACA5Q96QH8 159 aa7.12□□□□□ -1.27
VPS29-203ENST00000546588 URM1Q9BTM9 101 aaKnown RBP7.12□□□□□ -1.27
VPS29-203ENST00000546588 ADAT1Q9BUB4 502 aaKnown RBP7.12□□□□□ -1.27
VPS29-203ENST00000546588 RTL8AQ9BWD3 113 aa7.12□□□□□ -1.27
VPS29-203ENST00000546588 METTL9Q9H1A3 318 aa7.12□□□□□ -1.27
VPS29-203ENST00000546588 KCNK15Q9H427 330 aa7.12□□□□□ -1.27
VPS29-203ENST00000546588 PLK3Q9H4B4 646 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms