RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 THNSL2Q86YJ6 484 aa5.25□□□□□ -1.57
PRKDC-211ENST00000546304 ANKRD13BQ86YJ7 626 aa5.25□□□□□ -1.57
PRKDC-211ENST00000546304 CLVS1Q8IUQ0 354 aaPredicted RBP5.25□□□□□ -1.57
PRKDC-211ENST00000546304 OSR2Q8N2R0 312 aa5.25□□□□□ -1.57
PRKDC-211ENST00000546304 CD177Q8N6Q3 437 aa5.25□□□□□ -1.57
PRKDC-211ENST00000546304 ASCC1Q8N9N2 400 aaKnown RBP5.25□□□□□ -1.57
PRKDC-211ENST00000546304 TMEM104Q8NE00 496 aa5.25□□□□□ -1.57
PRKDC-211ENST00000546304 TMEM185AQ8NFB2 350 aa5.25□□□□□ -1.57
PRKDC-211ENST00000546304 Q8NFD4 153 aa5.25□□□□□ -1.57
PRKDC-211ENST00000546304 RAB2BQ8WUD1 216 aa5.25□□□□□ -1.57
PRKDC-211ENST00000546304 ST8SIA4Q92187 359 aa5.25□□□□□ -1.57
PRKDC-211ENST00000546304 SDSLQ96GA7 329 aa5.25□□□□□ -1.57
PRKDC-211ENST00000546304 CCL13Q99616 98 aa5.25□□□□□ -1.57
PRKDC-211ENST00000546304 TMEM59Q9BXS4 323 aa5.25□□□□□ -1.57
PRKDC-211ENST00000546304 NAA50Q9GZZ1 169 aaKnown RBP5.25□□□□□ -1.57
PRKDC-211ENST00000546304 LPAR2Q9HBW0 351 aa5.25□□□□□ -1.57
PRKDC-211ENST00000546304 GHRLQ9UBU3 117 aa5.25□□□□□ -1.57
PRKDC-211ENST00000546304 CLN8Q9UBY8 286 aa5.25□□□□□ -1.57
PRKDC-211ENST00000546304 ZNF69Q9UC07 566 aa5.25□□□□□ -1.57
PRKDC-211ENST00000546304 OR5V1Q9UGF6 321 aa5.25□□□□□ -1.57
PRKDC-211ENST00000546304 STEAP1Q9UHE8 339 aa5.25□□□□□ -1.57
PRKDC-211ENST00000546304 JMJD1CQ15652 2540 aa5.24□□□□□ -1.57
PRKDC-211ENST00000546304 A0A0B4J203 849 aa5.24□□□□□ -1.57
PRKDC-211ENST00000546304 TMEM14DPA8MWL7 114 aa5.24□□□□□ -1.57
PRKDC-211ENST00000546304 B4DSR2 109 aa5.24□□□□□ -1.57
PRKDC-211ENST00000546304 SIRPB1O00241 398 aa5.24□□□□□ -1.57
PRKDC-211ENST00000546304 DVL1O14640 695 aa5.24□□□□□ -1.57
PRKDC-211ENST00000546304 TNFRSF13BO14836 293 aaPredicted RBP5.24□□□□□ -1.57
PRKDC-211ENST00000546304 NDUFB3O43676 98 aa5.24□□□□□ -1.57
PRKDC-211ENST00000546304 ZNF737O75373 536 aa5.24□□□□□ -1.57
PRKDC-211ENST00000546304 FOXH1O75593 365 aa5.24□□□□□ -1.57
PRKDC-211ENST00000546304 FCN3O75636 299 aa5.24□□□□□ -1.57
PRKDC-211ENST00000546304 CRTAPO75718 401 aaPredicted RBP5.24□□□□□ -1.57
PRKDC-211ENST00000546304 OR7C1O76099 320 aaPredicted RBP5.24□□□□□ -1.57
PRKDC-211ENST00000546304 OR2H2O95918 312 aa5.24□□□□□ -1.57
PRKDC-211ENST00000546304 IL1AP01583 271 aa5.24□□□□□ -1.57
PRKDC-211ENST00000546304 WNT2P09544 360 aa5.24□□□□□ -1.57
PRKDC-211ENST00000546304 CLEC2LP0C7M8 214 aa5.24□□□□□ -1.57
PRKDC-211ENST00000546304 CD37P11049 281 aa5.24□□□□□ -1.57
PRKDC-211ENST00000546304 CD99P14209 185 aa5.24□□□□□ -1.57
PRKDC-211ENST00000546304 ZNF44P15621 663 aa5.24□□□□□ -1.57
PRKDC-211ENST00000546304 ARSBP15848 533 aa5.24□□□□□ -1.57
PRKDC-211ENST00000546304 GABRR1P24046 479 aa5.24□□□□□ -1.57
PRKDC-211ENST00000546304 DUSP1P28562 367 aa5.24□□□□□ -1.57
PRKDC-211ENST00000546304 PRDX2P32119 198 aa5.24□□□□□ -1.57
PRKDC-211ENST00000546304 RANBP1P43487 201 aa5.24□□□□□ -1.57
PRKDC-211ENST00000546304 SERPINB10P48595 397 aa5.24□□□□□ -1.57
PRKDC-211ENST00000546304 NPY4RP50391 375 aa5.24□□□□□ -1.57
PRKDC-211ENST00000546304 CAPZA1P52907 286 aa5.24□□□□□ -1.57
PRKDC-211ENST00000546304 CAV3P56539 151 aa5.24□□□□□ -1.57
PRKDC-211ENST00000546304 VBP1P61758 197 aa5.24□□□□□ -1.57
PRKDC-211ENST00000546304 LCN2P80188 198 aa5.24□□□□□ -1.57
PRKDC-211ENST00000546304 COL10A1Q03692 680 aa5.24□□□□□ -1.57
PRKDC-211ENST00000546304 UNC119Q13432 240 aa5.24□□□□□ -1.57
PRKDC-211ENST00000546304 MPV17LQ2QL34 196 aa5.24□□□□□ -1.57
PRKDC-211ENST00000546304 LRRC10Q5BKY1 277 aa5.24□□□□□ -1.57
PRKDC-211ENST00000546304 ATPAF1Q5TC12 328 aaPredicted RBP5.24□□□□□ -1.57
PRKDC-211ENST00000546304 WDR25Q64LD2 544 aaPredicted RBP5.24□□□□□ -1.57
PRKDC-211ENST00000546304 OR10K2Q6IF99 312 aa5.24□□□□□ -1.57
PRKDC-211ENST00000546304 OR2W3Q7Z3T1 314 aa5.24□□□□□ -1.57
PRKDC-211ENST00000546304 GLCCI1Q86VQ1 547 aa5.24□□□□□ -1.57
PRKDC-211ENST00000546304 OR8H2Q8N162 312 aa5.24□□□□□ -1.57
PRKDC-211ENST00000546304 FGFRL1Q8N441 504 aa5.24□□□□□ -1.57
PRKDC-211ENST00000546304 ZNF561Q8N587 486 aa5.24□□□□□ -1.57
PRKDC-211ENST00000546304 CHST4Q8NCG5 386 aa5.24□□□□□ -1.57
PRKDC-211ENST00000546304 ZNRF1Q8ND25 227 aa5.24□□□□□ -1.57
PRKDC-211ENST00000546304 OR51T1Q8NGJ9 327 aa5.24□□□□□ -1.57
PRKDC-211ENST00000546304 KCNG3Q8TAE7 436 aa5.24□□□□□ -1.57
PRKDC-211ENST00000546304 NDNFQ8TB73 568 aa5.24□□□□□ -1.57
PRKDC-211ENST00000546304 LGALS14Q8TCE9 139 aa5.24□□□□□ -1.57
PRKDC-211ENST00000546304 CFHR4Q92496 578 aa5.24□□□□□ -1.57
PRKDC-211ENST00000546304 SLC25A28Q96A46 364 aa5.24□□□□□ -1.57
PRKDC-211ENST00000546304 FAM3DQ96BQ1 224 aa5.24□□□□□ -1.57
PRKDC-211ENST00000546304 MSI2Q96DH6 328 aaKnown RBP5.24□□□□□ -1.57
PRKDC-211ENST00000546304 MRPS24Q96EL2 167 aaKnown RBP5.24□□□□□ -1.57
PRKDC-211ENST00000546304 MED30Q96HR3 178 aa5.24□□□□□ -1.57
PRKDC-211ENST00000546304 BCL7BQ9BQE9 202 aa5.24□□□□□ -1.57
PRKDC-211ENST00000546304 SELENOIQ9C0D9 397 aa5.24□□□□□ -1.57
PRKDC-211ENST00000546304 CHST6Q9GZX3 395 aa5.24□□□□□ -1.57
PRKDC-211ENST00000546304 PPA2Q9H2U2 334 aa5.24□□□□□ -1.57
PRKDC-211ENST00000546304 BANF2Q9H503 90 aa5.24□□□□□ -1.57
PRKDC-211ENST00000546304 PCDHB16Q9NRJ7 776 aa5.24□□□□□ -1.57
PRKDC-211ENST00000546304 SLC25A10Q9UBX3 287 aaPredicted RBP5.24□□□□□ -1.57
PRKDC-211ENST00000546304 GLS2Q9UI32 602 aa5.24□□□□□ -1.57
PRKDC-211ENST00000546304 DAPK2Q9UIK4 370 aa5.24□□□□□ -1.57
PRKDC-211ENST00000546304 CDC42EP3Q9UKI2 254 aa5.24□□□□□ -1.57
PRKDC-211ENST00000546304 ING4Q9UNL4 249 aa5.24□□□□□ -1.57
PRKDC-211ENST00000546304 ST3GAL6Q9Y274 331 aa5.24□□□□□ -1.57
PRKDC-211ENST00000546304 MAB21L2Q9Y586 359 aa5.24□□□□□ -1.57
PRKDC-211ENST00000546304 NF1P21359 2839 aa5.24□□□□□ -1.57
PRKDC-211ENST00000546304 IGHV2-70DA0A0C4DH43 119 aa5.23□□□□□ -1.57
PRKDC-211ENST00000546304 A0A0G2JMP0 313 aa5.23□□□□□ -1.57
PRKDC-211ENST00000546304 A0A0X1KG70 313 aa5.23□□□□□ -1.57
PRKDC-211ENST00000546304 TMEM272A0A1B0GTI8 110 aa5.23□□□□□ -1.57
PRKDC-211ENST00000546304 FAM90A10PA6NDY2 464 aa5.23□□□□□ -1.57
PRKDC-211ENST00000546304 FAM90A18PA6NE21 464 aa5.23□□□□□ -1.57
PRKDC-211ENST00000546304 FAM90A16PA6NEW6 464 aa5.23□□□□□ -1.57
PRKDC-211ENST00000546304 FAM90A20PA6NIJ5 464 aa5.23□□□□□ -1.57
PRKDC-211ENST00000546304 FAM90A8PA6NJQ4 464 aa5.23□□□□□ -1.57
PRKDC-211ENST00000546304 FAM90A7PA6NKC0 464 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms