RNA–Protein interactions for RNA: ENST00000546073.5

CD9-211, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-211ENST00000546073 PDZD9Q8IXQ8 264 aa14.38□□□□□ -0.11
CD9-211ENST00000546073 TPRX1Q8N7U7 411 aa14.38□□□□□ -0.11
CD9-211ENST00000546073 C22orf15Q8WYQ4 148 aa14.38□□□□□ -0.11
CD9-211ENST00000546073 TBX15Q96SF7 602 aa14.38□□□□□ -0.11
CD9-211ENST00000546073 PPIL3Q9H2H8 161 aaKnown RBP14.38□□□□□ -0.11
CD9-211ENST00000546073 ZNF469Q96JG9 3925 aaPredicted RBP14.37□□□□□ -0.11
CD9-211ENST00000546073 ZANQ9Y493 2812 aa14.37□□□□□ -0.11
CD9-211ENST00000546073 CENPVL3A0A0U1RRI6 287 aa14.37□□□□□ -0.11
CD9-211ENST00000546073 METTL21EPA6NDL7 271 aa14.37□□□□□ -0.11
CD9-211ENST00000546073 ZNF729A6NN14 1252 aaPredicted RBP14.37□□□□□ -0.11
CD9-211ENST00000546073 TRIM77I1YAP6 450 aa14.37□□□□□ -0.11
CD9-211ENST00000546073 AIREO43918 545 aa14.37□□□□□ -0.11
CD9-211ENST00000546073 FCN3O75636 299 aa14.37□□□□□ -0.11
CD9-211ENST00000546073 IGHV4-38-2P0DP08 117 aa14.37□□□□□ -0.11
CD9-211ENST00000546073 CCL3L1P16619 93 aa14.37□□□□□ -0.11
CD9-211ENST00000546073 GZMHP20718 246 aa14.37□□□□□ -0.11
CD9-211ENST00000546073 GLP1RP43220 463 aa14.37□□□□□ -0.11
CD9-211ENST00000546073 GLIPR1P48060 266 aa14.37□□□□□ -0.11
CD9-211ENST00000546073 UBE2E1P51965 193 aa14.37□□□□□ -0.11
CD9-211ENST00000546073 GP2P55259 537 aaKnown RBP14.37□□□□□ -0.11
CD9-211ENST00000546073 HES5Q5TA89 166 aa14.37□□□□□ -0.11
CD9-211ENST00000546073 SLC35E4Q6ICL7 350 aa14.37□□□□□ -0.11
CD9-211ENST00000546073 USP43Q70EL4 1123 aa14.37□□□□□ -0.11
CD9-211ENST00000546073 CROCCP3Q8IVE0 287 aa14.37□□□□□ -0.11
CD9-211ENST00000546073 PHF21AQ96BD5 680 aa14.37□□□□□ -0.11
CD9-211ENST00000546073 FAM3DQ96BQ1 224 aa14.37□□□□□ -0.11
CD9-211ENST00000546073 SLC6A7Q99884 636 aa14.37□□□□□ -0.11
CD9-211ENST00000546073 MRPS26Q9BYN8 205 aaKnown RBP14.37□□□□□ -0.11
CD9-211ENST00000546073 OR51E2Q9H255 320 aa14.37□□□□□ -0.11
CD9-211ENST00000546073 NCOR1P1Q9H4R4 102 aa14.37□□□□□ -0.11
CD9-211ENST00000546073 PLEKHJ1Q9NW61 149 aa14.37□□□□□ -0.11
CD9-211ENST00000546073 ETAA1Q9NY74 926 aa14.37□□□□□ -0.11
CD9-211ENST00000546073 KCNIP1Q9NZI2 227 aa14.37□□□□□ -0.11
CD9-211ENST00000546073 ZNF69Q9UC07 566 aa14.37□□□□□ -0.11
CD9-211ENST00000546073 TRAPPC2LQ9UL33 140 aa14.37□□□□□ -0.11
CD9-211ENST00000546073 TRAV24A0A0B4J272 114 aa14.36□□□□□ -0.11
CD9-211ENST00000546073 IFITM5A6NNB3 132 aa14.36□□□□□ -0.11
CD9-211ENST00000546073 NOTOA8MTQ0 251 aa14.36□□□□□ -0.11
CD9-211ENST00000546073 PDCD6O75340 191 aa14.36□□□□□ -0.11
CD9-211ENST00000546073 FSHBP01225 129 aa14.36□□□□□ -0.11
CD9-211ENST00000546073 VSIG8P0DPA2 414 aa14.36□□□□□ -0.11
CD9-211ENST00000546073 JUNBP17275 347 aaPredicted RBP14.36□□□□□ -0.11
CD9-211ENST00000546073 GADD45AP24522 165 aa14.36□□□□□ -0.11
CD9-211ENST00000546073 RPS27AP62979 156 aaKnown RBP14.36□□□□□ -0.11
CD9-211ENST00000546073 BAMBIQ13145 260 aa14.36□□□□□ -0.11
CD9-211ENST00000546073 DYNC1I2Q13409 638 aaKnown RBP14.36□□□□□ -0.11
CD9-211ENST00000546073 ZNF273Q14593 569 aa14.36□□□□□ -0.11
CD9-211ENST00000546073 KLF17Q5JT82 389 aaPredicted RBP14.36□□□□□ -0.11
CD9-211ENST00000546073 NKAPLQ5M9Q1 402 aa14.36□□□□□ -0.11
CD9-211ENST00000546073 BRD3OSQ6XYD6 125 aa14.36□□□□□ -0.11
CD9-211ENST00000546073 C9orf139Q6ZV77 190 aa14.36□□□□□ -0.11
CD9-211ENST00000546073 OR56B1Q8NGI3 324 aa14.36□□□□□ -0.11
CD9-211ENST00000546073 TMEM158Q8WZ71 300 aa14.36□□□□□ -0.11
CD9-211ENST00000546073 UNKLQ9H9P5 680 aaKnown RBP14.36□□□□□ -0.11
CD9-211ENST00000546073 ZMAT3Q9HA38 289 aaKnown RBP14.36□□□□□ -0.11
CD9-211ENST00000546073 RAB22AQ9UL26 194 aa14.36□□□□□ -0.11
CD9-211ENST00000546073 SESN1Q9Y6P5 492 aa14.36□□□□□ -0.11
CD9-211ENST00000546073 A0A1W2PP11 408 aa14.35□□□□□ -0.11
CD9-211ENST00000546073 MEIOCA2RUB1 952 aa14.35□□□□□ -0.11
CD9-211ENST00000546073 C17orf98A8MV24 154 aa14.35□□□□□ -0.11
CD9-211ENST00000546073 AIPO00170 330 aa14.35□□□□□ -0.11
CD9-211ENST00000546073 TOR1AO14656 332 aa14.35□□□□□ -0.11
CD9-211ENST00000546073 NPFFO15130 113 aa14.35□□□□□ -0.11
CD9-211ENST00000546073 CLPXO76031 633 aa14.35□□□□□ -0.11
CD9-211ENST00000546073 FBP1P09467 338 aa14.35□□□□□ -0.11
CD9-211ENST00000546073 C2orf76Q3KRA6 126 aa14.35□□□□□ -0.11
CD9-211ENST00000546073 C6orf183Q5T699 404 aa14.35□□□□□ -0.11
CD9-211ENST00000546073 TRAT1Q6PIZ9 186 aa14.35□□□□□ -0.11
CD9-211ENST00000546073 LYPD6Q86Y78 171 aa14.35□□□□□ -0.11
CD9-211ENST00000546073 TMEM104Q8NE00 496 aa14.35□□□□□ -0.11
CD9-211ENST00000546073 OR51D1Q8NGF3 324 aa14.35□□□□□ -0.11
CD9-211ENST00000546073 CORO2AQ92828 525 aa14.35□□□□□ -0.11
CD9-211ENST00000546073 Q96M66 194 aa14.35□□□□□ -0.11
CD9-211ENST00000546073 CHMP1AQ9HD42 196 aaPredicted RBP14.35□□□□□ -0.11
CD9-211ENST00000546073 KIF25Q9UIL4 384 aa14.35□□□□□ -0.11
CD9-211ENST00000546073 TMEM127O75204 238 aa14.34□□□□□ -0.11
CD9-211ENST00000546073 IGHV1-8P0DP01 117 aa14.34□□□□□ -0.11
CD9-211ENST00000546073 COX7A1P24310 79 aa14.34□□□□□ -0.11
CD9-211ENST00000546073 BLVRBP30043 206 aaPredicted RBP14.34□□□□□ -0.11
CD9-211ENST00000546073 ARHGDIBP52566 201 aa14.34□□□□□ -0.11
CD9-211ENST00000546073 PRRX1P54821 245 aa14.34□□□□□ -0.11
CD9-211ENST00000546073 MXD1Q05195 221 aa14.34□□□□□ -0.11
CD9-211ENST00000546073 MIDNQ504T8 468 aa14.34□□□□□ -0.11
CD9-211ENST00000546073 ZNF782Q6ZMW2 699 aaPredicted RBP14.34□□□□□ -0.11
CD9-211ENST00000546073 RTN4RL2Q86UN3 420 aa14.34□□□□□ -0.11
CD9-211ENST00000546073 PNKDQ8N490 385 aa14.34□□□□□ -0.11
CD9-211ENST00000546073 Q8N7P7 452 aa14.34□□□□□ -0.11
CD9-211ENST00000546073 SIGLECL1Q8N7X8 197 aa14.34□□□□□ -0.11
CD9-211ENST00000546073 CREB3L1Q96BA8 519 aa14.34□□□□□ -0.11
CD9-211ENST00000546073 DPAGT1Q9H3H5 408 aa14.34□□□□□ -0.11
CD9-211ENST00000546073 SONP18583 2426 aaKnown RBP14.33□□□□□ -0.12
CD9-211ENST00000546073 KBTBD11-OT1A0A1B0GTJ5 212 aa14.33□□□□□ -0.12
CD9-211ENST00000546073 A0A1W2PRD5 423 aa14.33□□□□□ -0.12
CD9-211ENST00000546073 A0A1W2PRF3 423 aa14.33□□□□□ -0.12
CD9-211ENST00000546073 A0A1W2PRM7 423 aa14.33□□□□□ -0.12
CD9-211ENST00000546073 MEX3AA1L020 520 aaKnown RBP14.33□□□□□ -0.12
CD9-211ENST00000546073 TMEM14DPA8MWL7 114 aa14.33□□□□□ -0.12
CD9-211ENST00000546073 SPINT2O43291 252 aa14.33□□□□□ -0.12
CD9-211ENST00000546073 NOL3O60936 208 aaKnown RBP14.33□□□□□ -0.12
CD9-211ENST00000546073 SCGNO76038 276 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms