RNA–Protein interactions for RNA: ENST00000545942.5

CHD4-214, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 1 (best)

Gene CHD4, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-214ENST00000545942 ZNF565Q8N9K5 539 aa18.22■□□□□ 0.51
CHD4-214ENST00000545942 LIN7BQ9HAP6 207 aa18.22■□□□□ 0.51
CHD4-214ENST00000545942 TAS2R4Q9NYW5 299 aa18.22■□□□□ 0.51
CHD4-214ENST00000545942 KBTBD11-OT1A0A1B0GTJ5 212 aa18.21■□□□□ 0.51
CHD4-214ENST00000545942 G3V4G9 280 aa18.21■□□□□ 0.51
CHD4-214ENST00000545942 BUB1B-PAK6H3BSN5 160 aa18.21■□□□□ 0.51
CHD4-214ENST00000545942 CD24P25063 80 aa18.21■□□□□ 0.51
CHD4-214ENST00000545942 IL13RA2Q14627 380 aa18.21■□□□□ 0.51
CHD4-214ENST00000545942 C17orf58Q2M2W7 97 aa18.21■□□□□ 0.51
CHD4-214ENST00000545942 XAF1Q6GPH4 301 aa18.21■□□□□ 0.51
CHD4-214ENST00000545942 TMPRSS11AQ6ZMR5 421 aa18.21■□□□□ 0.51
CHD4-214ENST00000545942 CNIH3Q8TBE1 160 aa18.21■□□□□ 0.51
CHD4-214ENST00000545942 CAPSLQ8WWF8 208 aa18.21■□□□□ 0.51
CHD4-214ENST00000545942 FAM192AQ9GZU8 254 aa18.21■□□□□ 0.51
CHD4-214ENST00000545942 NCOR1P1Q9H4R4 102 aa18.21■□□□□ 0.51
CHD4-214ENST00000545942 TRAV24A0A0B4J272 114 aa18.2■□□□□ 0.5
CHD4-214ENST00000545942 NFYBP25208 207 aa18.2■□□□□ 0.5
CHD4-214ENST00000545942 GLP1RP43220 463 aa18.2■□□□□ 0.5
CHD4-214ENST00000545942 ETV1P50549 477 aa18.2■□□□□ 0.5
CHD4-214ENST00000545942 RSU1Q15404 277 aa18.2■□□□□ 0.5
CHD4-214ENST00000545942 TMEM95Q3KNT9 176 aa18.2■□□□□ 0.5
CHD4-214ENST00000545942 TPTE2P1Q5T6R2 138 aa18.2■□□□□ 0.5
CHD4-214ENST00000545942 SAMD5Q5TGI4 173 aa18.2■□□□□ 0.5
CHD4-214ENST00000545942 Q8NFD4 153 aa18.2■□□□□ 0.5
CHD4-214ENST00000545942 TMEM106AQ96A25 262 aa18.2■□□□□ 0.5
CHD4-214ENST00000545942 KIRREL1Q96J84 757 aa18.2■□□□□ 0.5
CHD4-214ENST00000545942 CITED2Q99967 270 aaPredicted RBP18.2■□□□□ 0.5
CHD4-214ENST00000545942 OCSTAMPQ9BR26 566 aa18.2■□□□□ 0.5
CHD4-214ENST00000545942 BARHL1Q9BZE3 327 aa18.2■□□□□ 0.5
CHD4-214ENST00000545942 KIF25Q9UIL4 384 aa18.2■□□□□ 0.5
CHD4-214ENST00000545942 MEIKINA0A087WXM9 373 aa18.19■□□□□ 0.5
CHD4-214ENST00000545942 IRGMA1A4Y4 181 aa18.19■□□□□ 0.5
CHD4-214ENST00000545942 CGB3P0DN86 165 aa18.19■□□□□ 0.5
CHD4-214ENST00000545942 CGB7P0DN87 165 aa18.19■□□□□ 0.5
CHD4-214ENST00000545942 C21orf33P30042 268 aaPredicted RBP18.19■□□□□ 0.5
CHD4-214ENST00000545942 RBM39Q14498 530 aaKnown RBP18.19■□□□□ 0.5
CHD4-214ENST00000545942 BEAN1Q3B7T3 259 aa18.19■□□□□ 0.5
CHD4-214ENST00000545942 OR2G6Q5TZ20 316 aa18.19■□□□□ 0.5
CHD4-214ENST00000545942 CCDC144NLQ6NUI1 221 aa18.19■□□□□ 0.5
CHD4-214ENST00000545942 ASCL4Q6XD76 172 aa18.19■□□□□ 0.5
CHD4-214ENST00000545942 OR4F17Q8NGA8 305 aa18.19■□□□□ 0.5
CHD4-214ENST00000545942 OR10K1Q8NGX5 313 aa18.19■□□□□ 0.5
CHD4-214ENST00000545942 OR9G1Q8NH87 305 aa18.19■□□□□ 0.5
CHD4-214ENST00000545942 R3HDM4Q96D70 268 aa18.19■□□□□ 0.5
CHD4-214ENST00000545942 OR4F4Q96R69 305 aa18.19■□□□□ 0.5
CHD4-214ENST00000545942 MMP28Q9H239 520 aa18.19■□□□□ 0.5
CHD4-214ENST00000545942 PRKDCP78527 4128 aaKnown RBP18.18■□□□□ 0.5
CHD4-214ENST00000545942 OOSP1A8MZH6 123 aa18.18■□□□□ 0.5
CHD4-214ENST00000545942 LY6LH3BQJ8 138 aa18.18■□□□□ 0.5
CHD4-214ENST00000545942 OR2F2O95006 317 aa18.18■□□□□ 0.5
CHD4-214ENST00000545942 MNDAP41218 407 aa18.18■□□□□ 0.5
CHD4-214ENST00000545942 OR3A4PP47883 348 aa18.18■□□□□ 0.5
CHD4-214ENST00000545942 KCNJ3P48549 501 aa18.18■□□□□ 0.5
CHD4-214ENST00000545942 PPP3R1P63098 170 aa18.18■□□□□ 0.5
CHD4-214ENST00000545942 PAX5Q02548 391 aa18.18■□□□□ 0.5
CHD4-214ENST00000545942 PIGYQ3MUY2 71 aa18.18■□□□□ 0.5
CHD4-214ENST00000545942 OR13A1Q8NGR1 328 aa18.18■□□□□ 0.5
CHD4-214ENST00000545942 RBM14Q96PK6 669 aaKnown RBP18.18■□□□□ 0.5
CHD4-214ENST00000545942 SLC25A33Q9BSK2 321 aa18.18■□□□□ 0.5
CHD4-214ENST00000545942 TMEM138Q9NPI0 162 aa18.18■□□□□ 0.5
CHD4-214ENST00000545942 BABAM2Q9NXR7 383 aa18.18■□□□□ 0.5
CHD4-214ENST00000545942 CALYQ9NYX4 217 aa18.18■□□□□ 0.5
CHD4-214ENST00000545942 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.18■□□□□ 0.5
CHD4-214ENST00000545942 DIMT1Q9UNQ2 313 aaKnown RBP18.18■□□□□ 0.5
CHD4-214ENST00000545942 ADARB2-AS1A8MUL3 147 aa18.17■□□□□ 0.5
CHD4-214ENST00000545942 XPNPEP2O43895 674 aa18.17■□□□□ 0.5
CHD4-214ENST00000545942 HTR3BO95264 441 aa18.17■□□□□ 0.5
CHD4-214ENST00000545942 CLIC3O95833 236 aa18.17■□□□□ 0.5
CHD4-214ENST00000545942 MYL12AP19105 171 aa18.17■□□□□ 0.5
CHD4-214ENST00000545942 UTF1Q5T230 341 aa18.17■□□□□ 0.5
CHD4-214ENST00000545942 KPRPQ5T749 579 aaPredicted RBP18.17■□□□□ 0.5
CHD4-214ENST00000545942 RSBN1Q5VWQ0 802 aaPredicted RBP18.17■□□□□ 0.5
CHD4-214ENST00000545942 SMIM19Q96E16 107 aa18.17■□□□□ 0.5
CHD4-214ENST00000545942 LINC00574Q9H8X3 128 aa18.17■□□□□ 0.5
CHD4-214ENST00000545942 ZNF281Q9Y2X9 895 aa18.17■□□□□ 0.5
CHD4-214ENST00000545942 EXOSC1Q9Y3B2 195 aaKnown RBP18.17■□□□□ 0.5
CHD4-214ENST00000545942 AMMECR1Q9Y4X0 333 aaPredicted RBP18.17■□□□□ 0.5
CHD4-214ENST00000545942 SIRT4Q9Y6E7 314 aaPredicted RBP18.17■□□□□ 0.5
CHD4-214ENST00000545942 TGP01266 2768 aa18.16■□□□□ 0.5
CHD4-214ENST00000545942 OGG1O15527 345 aa18.16■□□□□ 0.5
CHD4-214ENST00000545942 IL1AP01583 271 aa18.16■□□□□ 0.5
CHD4-214ENST00000545942 ZNF93P35789 620 aaPredicted RBP18.16■□□□□ 0.5
CHD4-214ENST00000545942 ABCA11PQ4W5N1 156 aa18.16■□□□□ 0.5
CHD4-214ENST00000545942 KIAA2026Q5HYC2 2103 aa18.16■□□□□ 0.5
CHD4-214ENST00000545942 DDI2Q5TDH0 399 aa18.16■□□□□ 0.5
CHD4-214ENST00000545942 OR5AU1Q8NGC0 362 aa18.16■□□□□ 0.5
CHD4-214ENST00000545942 PLPPR1Q8TBJ4 325 aa18.16■□□□□ 0.5
CHD4-214ENST00000545942 METTL9Q9H1A3 318 aa18.16■□□□□ 0.5
CHD4-214ENST00000545942 PCDHB16Q9NRJ7 776 aa18.16■□□□□ 0.5
CHD4-214ENST00000545942 IDI2-AS1Q9NZ38 188 aa18.16■□□□□ 0.5
CHD4-214ENST00000545942 IL36GQ9NZH8 169 aa18.16■□□□□ 0.5
CHD4-214ENST00000545942 ST3GAL6Q9Y274 331 aa18.16■□□□□ 0.5
CHD4-214ENST00000545942 CDRT1O95170 752 aa18.15■□□□□ 0.5
CHD4-214ENST00000545942 CSTBP04080 98 aaKnown RBP18.15■□□□□ 0.5
CHD4-214ENST00000545942 LRRC36Q1X8D7 754 aa18.15■□□□□ 0.5
CHD4-214ENST00000545942 FBLN7Q53RD9 439 aa18.15■□□□□ 0.5
CHD4-214ENST00000545942 NHLRC3Q5JS37 347 aa18.15■□□□□ 0.5
CHD4-214ENST00000545942 TTC23Q5W5X9 447 aa18.15■□□□□ 0.5
CHD4-214ENST00000545942 CYGBQ8WWM9 190 aa18.15■□□□□ 0.5
CHD4-214ENST00000545942 TOMM40LQ969M1 308 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms