RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 LY86O95711 162 aa5.58□□□□□ -1.52
SNHG1-225ENST00000545920 PPYP01298 95 aa5.58□□□□□ -1.52
SNHG1-225ENST00000545920 IFNA1P01562 189 aa5.58□□□□□ -1.52
SNHG1-225ENST00000545920 IFNA10P01566 189 aa5.58□□□□□ -1.52
SNHG1-225ENST00000545920 IFNA5P01569 189 aa5.58□□□□□ -1.52
SNHG1-225ENST00000545920 IGHV2-70P01814 119 aa5.58□□□□□ -1.52
SNHG1-225ENST00000545920 FGF5P12034 268 aa5.58□□□□□ -1.52
SNHG1-225ENST00000545920 LIFP15018 202 aa5.58□□□□□ -1.52
SNHG1-225ENST00000545920 GABRR1P24046 479 aa5.58□□□□□ -1.52
SNHG1-225ENST00000545920 S100A2P29034 98 aa5.58□□□□□ -1.52
SNHG1-225ENST00000545920 SRD5A2P31213 254 aa5.58□□□□□ -1.52
SNHG1-225ENST00000545920 RPS23P62266 143 aaKnown RBP5.58□□□□□ -1.52
SNHG1-225ENST00000545920 POLR2GP62487 172 aaKnown RBP eCLIP5.58□□□□□ -1.52
SNHG1-225ENST00000545920 SERF2P84101 59 aa5.58□□□□□ -1.52
SNHG1-225ENST00000545920 RNPS1Q15287 305 aaKnown RBP5.58□□□□□ -1.52
SNHG1-225ENST00000545920 HYAL4Q2M3T9 481 aa5.58□□□□□ -1.52
SNHG1-225ENST00000545920 RSPO1Q2MKA7 263 aaPredicted RBP5.58□□□□□ -1.52
SNHG1-225ENST00000545920 LBHQ53QV2 105 aaPredicted RBP5.58□□□□□ -1.52
SNHG1-225ENST00000545920 KRBOX4Q5JUW0 171 aa5.58□□□□□ -1.52
SNHG1-225ENST00000545920 AKR1C8PQ5T2L2 129 aa5.58□□□□□ -1.52
SNHG1-225ENST00000545920 FAM69BQ5VUD6 431 aa5.58□□□□□ -1.52
SNHG1-225ENST00000545920 CARD17Q5XLA6 110 aa5.58□□□□□ -1.52
SNHG1-225ENST00000545920 RPS19BP1Q86WX3 136 aaKnown RBP5.58□□□□□ -1.52
SNHG1-225ENST00000545920 PPP1R3BQ86XI6 285 aa5.58□□□□□ -1.52
SNHG1-225ENST00000545920 STX12Q86Y82 276 aa5.58□□□□□ -1.52
SNHG1-225ENST00000545920 ZNF695Q8IW36 515 aa5.58□□□□□ -1.52
SNHG1-225ENST00000545920 FOXRED2Q8IWF2 684 aa5.58□□□□□ -1.52
SNHG1-225ENST00000545920 PRSS58Q8IYP2 241 aa5.58□□□□□ -1.52
SNHG1-225ENST00000545920 CMTM1Q8IZ96 169 aa5.58□□□□□ -1.52
SNHG1-225ENST00000545920 H1FOOQ8IZA3 346 aaPredicted RBP5.58□□□□□ -1.52
SNHG1-225ENST00000545920 TMEM156Q8N614 296 aa5.58□□□□□ -1.52
SNHG1-225ENST00000545920 BHLHE23Q8NDY6 225 aa5.58□□□□□ -1.52
SNHG1-225ENST00000545920 OR2G3Q8NGZ4 309 aa5.58□□□□□ -1.52
SNHG1-225ENST00000545920 NANPQ8TBE9 248 aa5.58□□□□□ -1.52
SNHG1-225ENST00000545920 FAM213BQ8TBF2 198 aa5.58□□□□□ -1.52
SNHG1-225ENST00000545920 CD300LFQ8TDQ1 290 aa5.58□□□□□ -1.52
SNHG1-225ENST00000545920 C2CD4CQ8TF44 421 aa5.58□□□□□ -1.52
SNHG1-225ENST00000545920 TOMM40LQ969M1 308 aa5.58□□□□□ -1.52
SNHG1-225ENST00000545920 TMEM45BQ96B21 275 aa5.58□□□□□ -1.52
SNHG1-225ENST00000545920 PINX1Q96BK5 328 aaKnown RBP5.58□□□□□ -1.52
SNHG1-225ENST00000545920 DNAJA3Q96EY1 480 aa5.58□□□□□ -1.52
SNHG1-225ENST00000545920 ATP5SQ99766 215 aa5.58□□□□□ -1.52
SNHG1-225ENST00000545920 SSX3Q99909 188 aa5.58□□□□□ -1.52
SNHG1-225ENST00000545920 PSMG3Q9BT73 122 aaPredicted RBP5.58□□□□□ -1.52
SNHG1-225ENST00000545920 WFDC1Q9HC57 220 aa5.58□□□□□ -1.52
SNHG1-225ENST00000545920 SH2D2AQ9NP31 389 aa5.58□□□□□ -1.52
SNHG1-225ENST00000545920 TMEM38BQ9NVV0 291 aa5.58□□□□□ -1.52
SNHG1-225ENST00000545920 RCL1Q9Y2P8 373 aaKnown RBP5.58□□□□□ -1.52
SNHG1-225ENST00000545920 FREM3P0C091 2139 aa5.57□□□□□ -1.52
SNHG1-225ENST00000545920 IGKV1D-8A0A087WSZ0 117 aa5.57□□□□□ -1.52
SNHG1-225ENST00000545920 hCG_38984A0A1B0GV85 526 aa5.57□□□□□ -1.52
SNHG1-225ENST00000545920 A0A1W2PPH5 198 aa5.57□□□□□ -1.52
SNHG1-225ENST00000545920 A6NLC8 198 aa5.57□□□□□ -1.52
SNHG1-225ENST00000545920 FAM90A26D6RGX4 464 aa5.57□□□□□ -1.52
SNHG1-225ENST00000545920 NPIPB11E5RHQ5 1161 aa5.57□□□□□ -1.52
SNHG1-225ENST00000545920 PHF1O43189 567 aaPredicted RBP5.57□□□□□ -1.52
SNHG1-225ENST00000545920 KCNAB3O43448 404 aa5.57□□□□□ -1.52
SNHG1-225ENST00000545920 OPN1MWP04001 364 aa5.57□□□□□ -1.52
SNHG1-225ENST00000545920 SRP19P09132 144 aaKnown RBP5.57□□□□□ -1.52
SNHG1-225ENST00000545920 OPN1MW2P0DN77 364 aa5.57□□□□□ -1.52
SNHG1-225ENST00000545920 OPN1MW3P0DN78 364 aa5.57□□□□□ -1.52
SNHG1-225ENST00000545920 FOSL1P15407 271 aa5.57□□□□□ -1.52
SNHG1-225ENST00000545920 ATP6V0CP27449 155 aa5.57□□□□□ -1.52
SNHG1-225ENST00000545920 APLNRP35414 380 aa5.57□□□□□ -1.52
SNHG1-225ENST00000545920 HTR5AP47898 357 aa5.57□□□□□ -1.52
SNHG1-225ENST00000545920 GLIPR1P48060 266 aa5.57□□□□□ -1.52
SNHG1-225ENST00000545920 NPBWR2P48146 333 aa5.57□□□□□ -1.52
SNHG1-225ENST00000545920 SSR4P51571 173 aa5.57□□□□□ -1.52
SNHG1-225ENST00000545920 RND2P52198 227 aa5.57□□□□□ -1.52
SNHG1-225ENST00000545920 UBE2KP61086 200 aa5.57□□□□□ -1.52
SNHG1-225ENST00000545920 SSTP61278 116 aa5.57□□□□□ -1.52
SNHG1-225ENST00000545920 RPL23AP62750 156 aaKnown RBP5.57□□□□□ -1.52
SNHG1-225ENST00000545920 PCOLCEQ15113 449 aa5.57□□□□□ -1.52
SNHG1-225ENST00000545920 MSMO1Q15800 293 aa5.57□□□□□ -1.52
SNHG1-225ENST00000545920 TAF9Q16594 264 aa5.57□□□□□ -1.52
SNHG1-225ENST00000545920 NMSQ5H8A3 153 aa5.57□□□□□ -1.52
SNHG1-225ENST00000545920 LCN10Q6JVE6 187 aa5.57□□□□□ -1.52
SNHG1-225ENST00000545920 Q6ZS52 159 aa5.57□□□□□ -1.52
SNHG1-225ENST00000545920 MOB1BQ7L9L4 216 aa5.57□□□□□ -1.52
SNHG1-225ENST00000545920 LYZL2Q7Z4W2 148 aa5.57□□□□□ -1.52
SNHG1-225ENST00000545920 MKXQ8IYA7 352 aa5.57□□□□□ -1.52
SNHG1-225ENST00000545920 ZFP82Q8N141 532 aa5.57□□□□□ -1.52
SNHG1-225ENST00000545920 SPEM1Q8N4L4 309 aa5.57□□□□□ -1.52
SNHG1-225ENST00000545920 TMEM252Q8N6L7 170 aa5.57□□□□□ -1.52
SNHG1-225ENST00000545920 LINC00469Q8N7U9 141 aa5.57□□□□□ -1.52
SNHG1-225ENST00000545920 OR10AD1Q8NGE0 317 aa5.57□□□□□ -1.52
SNHG1-225ENST00000545920 MBD3L1Q8WWY6 194 aa5.57□□□□□ -1.52
SNHG1-225ENST00000545920 LSM10Q969L4 123 aaKnown RBP5.57□□□□□ -1.52
SNHG1-225ENST00000545920 LIN37Q96GY3 246 aaPredicted RBP5.57□□□□□ -1.52
SNHG1-225ENST00000545920 SOX7Q9BT81 388 aa5.57□□□□□ -1.52
SNHG1-225ENST00000545920 FAAP24Q9BTP7 215 aa5.57□□□□□ -1.52
SNHG1-225ENST00000545920 RBM24Q9BX46 236 aaKnown RBP5.57□□□□□ -1.52
SNHG1-225ENST00000545920 C1QTNF5Q9BXJ0 243 aa5.57□□□□□ -1.52
SNHG1-225ENST00000545920 LINC00470Q9BZP3 86 aa5.57□□□□□ -1.52
SNHG1-225ENST00000545920 GPR173Q9NS66 373 aa5.57□□□□□ -1.52
SNHG1-225ENST00000545920 GAR1Q9NY12 217 aaKnown RBP5.57□□□□□ -1.52
SNHG1-225ENST00000545920 CISD1Q9NZ45 108 aaKnown RBP5.57□□□□□ -1.52
SNHG1-225ENST00000545920 MIOXQ9UGB7 285 aa5.57□□□□□ -1.52
SNHG1-225ENST00000545920 ST3GAL6Q9Y274 331 aa5.57□□□□□ -1.52
SNHG1-225ENST00000545920 UBE2J1Q9Y385 318 aaPredicted RBP5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms