RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 SLC22A13Q9Y226 551 aa11.89□□□□□ -0.51
CLSTN3-216ENST00000545663 DSCAML1Q8TD84 2053 aa11.89□□□□□ -0.51
CLSTN3-216ENST00000545663 EFCAB10A6NFE3 127 aa11.88□□□□□ -0.51
CLSTN3-216ENST00000545663 ZNF737O75373 536 aa11.88□□□□□ -0.51
CLSTN3-216ENST00000545663 NXPH2O95156 264 aa11.88□□□□□ -0.51
CLSTN3-216ENST00000545663 BRI3O95415 125 aa11.88□□□□□ -0.51
CLSTN3-216ENST00000545663 ELANEP08246 267 aa11.88□□□□□ -0.51
CLSTN3-216ENST00000545663 ALOX5APP20292 161 aa11.88□□□□□ -0.51
CLSTN3-216ENST00000545663 ZNF616Q08AN1 781 aa11.88□□□□□ -0.51
CLSTN3-216ENST00000545663 RNLSQ5VYX0 342 aa11.88□□□□□ -0.51
CLSTN3-216ENST00000545663 KCTD20Q7Z5Y7 419 aa11.88□□□□□ -0.51
CLSTN3-216ENST00000545663 SLC35F2Q8IXU6 374 aa11.88□□□□□ -0.51
CLSTN3-216ENST00000545663 OR6Q1Q8NGQ2 317 aa11.88□□□□□ -0.51
CLSTN3-216ENST00000545663 OR56B4Q8NH76 319 aa11.88□□□□□ -0.51
CLSTN3-216ENST00000545663 TRMT10AQ8TBZ6 339 aaKnown RBP11.88□□□□□ -0.51
CLSTN3-216ENST00000545663 FBLIM1Q8WUP2 373 aa11.88□□□□□ -0.51
CLSTN3-216ENST00000545663 THEM6Q8WUY1 208 aa11.88□□□□□ -0.51
CLSTN3-216ENST00000545663 RNF133Q8WVZ7 376 aa11.88□□□□□ -0.51
CLSTN3-216ENST00000545663 ITFG2Q969R8 447 aa11.88□□□□□ -0.51
CLSTN3-216ENST00000545663 PGAM5Q96HS1 289 aa11.88□□□□□ -0.51
CLSTN3-216ENST00000545663 ABHD6Q9BV23 337 aa11.88□□□□□ -0.51
CLSTN3-216ENST00000545663 ADGRL4Q9HBW9 690 aa11.88□□□□□ -0.51
CLSTN3-216ENST00000545663 ABCB9Q9NP78 766 aa11.88□□□□□ -0.51
CLSTN3-216ENST00000545663 PLCXD1Q9NUJ7 323 aa11.88□□□□□ -0.51
CLSTN3-216ENST00000545663 SCN3BQ9NY72 215 aa11.88□□□□□ -0.51
CLSTN3-216ENST00000545663 CNOT2Q9NZN8 540 aaKnown RBP11.88□□□□□ -0.51
CLSTN3-216ENST00000545663 BLOC1S6Q9UL45 172 aa11.88□□□□□ -0.51
CLSTN3-216ENST00000545663 ACOD1A6NK06 481 aa11.87□□□□□ -0.51
CLSTN3-216ENST00000545663 BUB1B-PAK6H3BSN5 160 aa11.87□□□□□ -0.51
CLSTN3-216ENST00000545663 I3L521 148 aa11.87□□□□□ -0.51
CLSTN3-216ENST00000545663 AP4M1O00189 453 aa11.87□□□□□ -0.51
CLSTN3-216ENST00000545663 PSMD9O00233 223 aa11.87□□□□□ -0.51
CLSTN3-216ENST00000545663 SELENOFO60613 162 aa11.87□□□□□ -0.51
CLSTN3-216ENST00000545663 H2BFMP0C1H6 154 aa11.87□□□□□ -0.51
CLSTN3-216ENST00000545663 DBTP11182 482 aaKnown RBP11.87□□□□□ -0.51
CLSTN3-216ENST00000545663 ARSBP15848 533 aa11.87□□□□□ -0.51
CLSTN3-216ENST00000545663 TMEM11P17152 192 aa11.87□□□□□ -0.51
CLSTN3-216ENST00000545663 DCKP27707 260 aa11.87□□□□□ -0.51
CLSTN3-216ENST00000545663 HSD11B1P28845 292 aa11.87□□□□□ -0.51
CLSTN3-216ENST00000545663 GDNFP39905 211 aa11.87□□□□□ -0.51
CLSTN3-216ENST00000545663 GPR12P47775 334 aa11.87□□□□□ -0.51
CLSTN3-216ENST00000545663 ROM1Q03395 351 aa11.87□□□□□ -0.51
CLSTN3-216ENST00000545663 ZNF91Q05481 1191 aa11.87□□□□□ -0.51
CLSTN3-216ENST00000545663 MEF2CQ06413 473 aaPredicted RBP11.87□□□□□ -0.51
CLSTN3-216ENST00000545663 HES1Q14469 280 aa11.87□□□□□ -0.51
CLSTN3-216ENST00000545663 CEACAM21Q3KPI0 293 aa11.87□□□□□ -0.51
CLSTN3-216ENST00000545663 PLEKHG7Q6ZR37 379 aa11.87□□□□□ -0.51
CLSTN3-216ENST00000545663 BCDIN3DQ7Z5W3 292 aaKnown RBP11.87□□□□□ -0.51
CLSTN3-216ENST00000545663 LYPD6Q86Y78 171 aa11.87□□□□□ -0.51
CLSTN3-216ENST00000545663 ACBD7Q8N6N7 88 aa11.87□□□□□ -0.51
CLSTN3-216ENST00000545663 HIPK2Q9H2X6 1198 aa11.87□□□□□ -0.51
CLSTN3-216ENST00000545663 ZNF286AQ9HBT8 521 aa11.87□□□□□ -0.51
CLSTN3-216ENST00000545663 CHCHD3Q9NX63 227 aaKnown RBP11.87□□□□□ -0.51
CLSTN3-216ENST00000545663 EXOGQ9Y2C4 368 aaKnown RBP11.87□□□□□ -0.51
CLSTN3-216ENST00000545663 FAT2Q9NYQ8 4349 aa11.87□□□□□ -0.51
CLSTN3-216ENST00000545663 DYNC1H1Q14204 4646 aaKnown RBP11.87□□□□□ -0.51
CLSTN3-216ENST00000545663 hADV38S2A0JD32 116 aa11.86□□□□□ -0.51
CLSTN3-216ENST00000545663 TMEM82A0PJX8 343 aa11.86□□□□□ -0.51
CLSTN3-216ENST00000545663 DENRO43583 198 aaKnown RBP11.86□□□□□ -0.51
CLSTN3-216ENST00000545663 WBP4O75554 376 aaKnown RBP11.86□□□□□ -0.51
CLSTN3-216ENST00000545663 SULT1C4O75897 302 aa11.86□□□□□ -0.51
CLSTN3-216ENST00000545663 KRT8P05787 483 aa11.86□□□□□ -0.51
CLSTN3-216ENST00000545663 GNAO1P09471 354 aa11.86□□□□□ -0.51
CLSTN3-216ENST00000545663 MED14OSP0DP75 135 aa11.86□□□□□ -0.51
CLSTN3-216ENST00000545663 MNDAP41218 407 aa11.86□□□□□ -0.51
CLSTN3-216ENST00000545663 SLURP1P55000 103 aa11.86□□□□□ -0.51
CLSTN3-216ENST00000545663 CFHR3Q02985 330 aa11.86□□□□□ -0.51
CLSTN3-216ENST00000545663 MRPL28Q13084 256 aaKnown RBP11.86□□□□□ -0.51
CLSTN3-216ENST00000545663 KIAA0141Q14154 515 aaPredicted RBP11.86□□□□□ -0.51
CLSTN3-216ENST00000545663 RBM39Q14498 530 aaKnown RBP11.86□□□□□ -0.51
CLSTN3-216ENST00000545663 THNSL2Q86YJ6 484 aa11.86□□□□□ -0.51
CLSTN3-216ENST00000545663 ZNF679Q8IYX0 411 aa11.86□□□□□ -0.51
CLSTN3-216ENST00000545663 OR10H4Q8NGA5 316 aa11.86□□□□□ -0.51
CLSTN3-216ENST00000545663 ZNF596Q8TC21 504 aa11.86□□□□□ -0.51
CLSTN3-216ENST00000545663 APH1BQ8WW43 257 aa11.86□□□□□ -0.51
CLSTN3-216ENST00000545663 ARPC1AQ92747 370 aa11.86□□□□□ -0.51
CLSTN3-216ENST00000545663 JAM3Q9BX67 310 aa11.86□□□□□ -0.51
CLSTN3-216ENST00000545663 KLK15Q9H2R5 256 aa11.86□□□□□ -0.51
CLSTN3-216ENST00000545663 TPRKBQ9Y3C4 175 aa11.86□□□□□ -0.51
CLSTN3-216ENST00000545663 LINC00312Q9Y6C7 94 aa11.86□□□□□ -0.51
CLSTN3-216ENST00000545663 DNAH2Q9P225 4427 aa11.85□□□□□ -0.51
CLSTN3-216ENST00000545663 FGF16O43320 207 aa11.85□□□□□ -0.51
CLSTN3-216ENST00000545663 PSPNO60542 156 aa11.85□□□□□ -0.51
CLSTN3-216ENST00000545663 RPSAP08865 295 aaKnown RBP11.85□□□□□ -0.51
CLSTN3-216ENST00000545663 MRPL3P09001 348 aaKnown RBP11.85□□□□□ -0.51
CLSTN3-216ENST00000545663 MYL12AP19105 171 aa11.85□□□□□ -0.51
CLSTN3-216ENST00000545663 OPRL1P41146 370 aa11.85□□□□□ -0.51
CLSTN3-216ENST00000545663 RIDAP52758 137 aaKnown RBP11.85□□□□□ -0.51
CLSTN3-216ENST00000545663 ZNF829Q3KNS6 432 aaPredicted RBP11.85□□□□□ -0.51
CLSTN3-216ENST00000545663 C6orf141Q5SZD1 244 aa11.85□□□□□ -0.51
CLSTN3-216ENST00000545663 ZNF322Q6U7Q0 402 aaPredicted RBP11.85□□□□□ -0.51
CLSTN3-216ENST00000545663 MOB3CQ70IA8 216 aa11.85□□□□□ -0.51
CLSTN3-216ENST00000545663 FAM220AQ7Z4H9 259 aa11.85□□□□□ -0.51
CLSTN3-216ENST00000545663 CNIH3Q8TBE1 160 aa11.85□□□□□ -0.51
CLSTN3-216ENST00000545663 LGALS12Q96DT0 336 aa11.85□□□□□ -0.51
CLSTN3-216ENST00000545663 AMELYQ99218 206 aa11.85□□□□□ -0.51
CLSTN3-216ENST00000545663 YTHDF1Q9BYJ9 559 aaKnown RBP11.85□□□□□ -0.51
CLSTN3-216ENST00000545663 ALX4Q9H161 411 aaPredicted RBP11.85□□□□□ -0.51
CLSTN3-216ENST00000545663 HES4Q9HCC6 221 aa11.85□□□□□ -0.51
CLSTN3-216ENST00000545663 FGF20Q9NP95 211 aaPredicted RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms