RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, human

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG1-222	ENST00000545308	SAV1	Q9H4B6	383 aa	Predicted RBP	2.7	□□□□□ -1.98
SNHG1-222	ENST00000545308	ANKH	Q9HCJ1	492 aa		2.7	□□□□□ -1.98
SNHG1-222	ENST00000545308	SLC40A1	Q9NP59	571 aa		2.7	□□□□□ -1.98
SNHG1-222	ENST00000545308	NXT1	Q9UKK6	140 aa	Known RBP	2.7	□□□□□ -1.98
SNHG1-222	ENST00000545308	PPIL1	Q9Y3C6	166 aa		2.7	□□□□□ -1.98
SNHG1-222	ENST00000545308	NSD1	Q96L73	2696 aa	Predicted RBP	2.7	□□□□□ -1.98
SNHG1-222	ENST00000545308	ARID1A	O14497	2285 aa		2.7	□□□□□ -1.98
SNHG1-222	ENST00000545308	ARHGAP21	Q5T5U3	1957 aa		2.69	□□□□□ -1.98
SNHG1-222	ENST00000545308	VPS13C	Q709C8	3753 aa		2.69	□□□□□ -1.98
SNHG1-222	ENST00000545308	IGLV11-55	A0A075B6I3	123 aa		2.69	□□□□□ -1.98
SNHG1-222	ENST00000545308		A0A0J9YXV3	536 aa		2.69	□□□□□ -1.98
SNHG1-222	ENST00000545308	PDZK1P1	A8MUH7	402 aa		2.69	□□□□□ -1.98
SNHG1-222	ENST00000545308	C11orf94	C9JXX5	98 aa		2.69	□□□□□ -1.98
SNHG1-222	ENST00000545308	SLC25A14	O95258	325 aa	Predicted RBP	2.69	□□□□□ -1.98
SNHG1-222	ENST00000545308	YEATS4	O95619	227 aa		2.69	□□□□□ -1.98
SNHG1-222	ENST00000545308	APOA1	P02647	267 aa		2.69	□□□□□ -1.98
SNHG1-222	ENST00000545308	BCHE	P06276	602 aa		2.69	□□□□□ -1.98
SNHG1-222	ENST00000545308	TLX1NB	P0CAT3	122 aa		2.69	□□□□□ -1.98
SNHG1-222	ENST00000545308	CA5A	P35218	305 aa		2.69	□□□□□ -1.98
SNHG1-222	ENST00000545308	HCAR3	P49019	387 aa		2.69	□□□□□ -1.98
SNHG1-222	ENST00000545308	NDUFA8	P51970	172 aa		2.69	□□□□□ -1.98
SNHG1-222	ENST00000545308	AP1S2	P56377	157 aa		2.69	□□□□□ -1.98
SNHG1-222	ENST00000545308	TAS2R39	P59534	338 aa		2.69	□□□□□ -1.98
SNHG1-222	ENST00000545308	KRTAP12-2	P59991	146 aa		2.69	□□□□□ -1.98
SNHG1-222	ENST00000545308	KRTAP10-8	P60410	259 aa		2.69	□□□□□ -1.98
SNHG1-222	ENST00000545308	UBE2N	P61088	152 aa	Known RBP	2.69	□□□□□ -1.98
SNHG1-222	ENST00000545308	UBE2I	P63279	158 aa	Known RBP	2.69	□□□□□ -1.98
SNHG1-222	ENST00000545308	LRRC63	Q05C16	580 aa		2.69	□□□□□ -1.98
SNHG1-222	ENST00000545308	GINS1	Q14691	196 aa		2.69	□□□□□ -1.98
SNHG1-222	ENST00000545308	KIR2DS1	Q14954	304 aa		2.69	□□□□□ -1.98
SNHG1-222	ENST00000545308	C18orf21	Q32NC0	220 aa	Predicted RBP	2.69	□□□□□ -1.98
SNHG1-222	ENST00000545308	NDUFAF6	Q330K2	333 aa		2.69	□□□□□ -1.98
SNHG1-222	ENST00000545308	PDPK2P	Q6A1A2	396 aa		2.69	□□□□□ -1.98
SNHG1-222	ENST00000545308	DEGS2	Q6QHC5	323 aa		2.69	□□□□□ -1.98
SNHG1-222	ENST00000545308	FAM92B	Q6ZTR7	304 aa		2.69	□□□□□ -1.98
SNHG1-222	ENST00000545308	ST13P4	Q8IZP2	240 aa	Predicted RBP	2.69	□□□□□ -1.98
SNHG1-222	ENST00000545308	UMODL1-AS1	Q8N2C9	162 aa		2.69	□□□□□ -1.98
SNHG1-222	ENST00000545308	SYS1	Q8N2H4	156 aa		2.69	□□□□□ -1.98
SNHG1-222	ENST00000545308	TCAIM	Q8N3R3	496 aa		2.69	□□□□□ -1.98
SNHG1-222	ENST00000545308		Q8N976	141 aa		2.69	□□□□□ -1.98
SNHG1-222	ENST00000545308	DRAXIN	Q8NBI3	349 aa	Predicted RBP	2.69	□□□□□ -1.98
SNHG1-222	ENST00000545308	ACBD4	Q8NC06	268 aa		2.69	□□□□□ -1.98
SNHG1-222	ENST00000545308	OR11H7	Q8NGC8	314 aa		2.69	□□□□□ -1.98
SNHG1-222	ENST00000545308	NTAN1	Q96AB6	310 aa		2.69	□□□□□ -1.98
SNHG1-222	ENST00000545308	CENPN	Q96H22	339 aa	Predicted RBP	2.69	□□□□□ -1.98
SNHG1-222	ENST00000545308	COX14	Q96I36	57 aa		2.69	□□□□□ -1.98
SNHG1-222	ENST00000545308	ZIM3	Q96PE6	472 aa		2.69	□□□□□ -1.98
SNHG1-222	ENST00000545308	TIMM29	Q9BSF4	260 aa		2.69	□□□□□ -1.98
SNHG1-222	ENST00000545308	PARP12	Q9H0J9	701 aa	Known RBP	2.69	□□□□□ -1.98
SNHG1-222	ENST00000545308	MED4	Q9NPJ6	270 aa		2.69	□□□□□ -1.98
SNHG1-222	ENST00000545308	RMND1	Q9NWS8	449 aa		2.69	□□□□□ -1.98
SNHG1-222	ENST00000545308	RPS6KB2	Q9UBS0	482 aa		2.69	□□□□□ -1.98
SNHG1-222	ENST00000545308	BTRC	Q9Y297	605 aa		2.69	□□□□□ -1.98
SNHG1-222	ENST00000545308	ZNF835	Q9Y2P0	537 aa		2.69	□□□□□ -1.98
SNHG1-222	ENST00000545308	ZNF257	Q9Y2Q1	563 aa		2.69	□□□□□ -1.98
SNHG1-222	ENST00000545308	ZNF469	Q96JG9	3925 aa	Predicted RBP	2.69	□□□□□ -1.98
SNHG1-222	ENST00000545308	HEATR5A	Q86XA9	2040 aa		2.69	□□□□□ -1.98
SNHG1-222	ENST00000545308	DNAJC13	O75165	2243 aa		2.69	□□□□□ -1.98
SNHG1-222	ENST00000545308	FBN1	P35555	2871 aa	Known RBP	2.69	□□□□□ -1.98
SNHG1-222	ENST00000545308	DSCAM	O60469	2012 aa		2.68	□□□□□ -1.98
SNHG1-222	ENST00000545308	AKAP6	Q13023	2319 aa		2.68	□□□□□ -1.98
SNHG1-222	ENST00000545308	SMIM26	A0A096LP01	95 aa		2.68	□□□□□ -1.98
SNHG1-222	ENST00000545308	IGHV3OR16-9	A0A0B4J2B5	98 aa		2.68	□□□□□ -1.98
SNHG1-222	ENST00000545308	IGHV5-51	A0A0C4DH38	117 aa		2.68	□□□□□ -1.98
SNHG1-222	ENST00000545308	IGHV3-66	A0A0C4DH42	116 aa		2.68	□□□□□ -1.98
SNHG1-222	ENST00000545308	INS-IGF2	F8WCM5	200 aa		2.68	□□□□□ -1.98
SNHG1-222	ENST00000545308		K7EN84	100 aa		2.68	□□□□□ -1.98
SNHG1-222	ENST00000545308	CTNS	O60931	367 aa		2.68	□□□□□ -1.98
SNHG1-222	ENST00000545308	RP2	O75695	350 aa		2.68	□□□□□ -1.98
SNHG1-222	ENST00000545308	KLF7	O75840	302 aa	Predicted RBP	2.68	□□□□□ -1.98
SNHG1-222	ENST00000545308	SC5D	O75845	299 aa		2.68	□□□□□ -1.98
SNHG1-222	ENST00000545308	TRAPPC6A	O75865	159 aa		2.68	□□□□□ -1.98
SNHG1-222	ENST00000545308	CDK14	O94921	469 aa		2.68	□□□□□ -1.98
SNHG1-222	ENST00000545308	SMC2	O95347	1197 aa		2.68	□□□□□ -1.98
SNHG1-222	ENST00000545308	PTTG1	O95997	202 aa		2.68	□□□□□ -1.98
SNHG1-222	ENST00000545308	HLA-DPB1	P04440	258 aa		2.68	□□□□□ -1.98
SNHG1-222	ENST00000545308	GLA	P06280	429 aa		2.68	□□□□□ -1.98
SNHG1-222	ENST00000545308	ZNF7	P17097	686 aa	Predicted RBP	2.68	□□□□□ -1.98
SNHG1-222	ENST00000545308	IGFBP3	P17936	291 aa	Predicted RBP	2.68	□□□□□ -1.98
SNHG1-222	ENST00000545308	SDC4	P31431	198 aa		2.68	□□□□□ -1.98
SNHG1-222	ENST00000545308	DEK	P35659	375 aa	Known RBP	2.68	□□□□□ -1.98
SNHG1-222	ENST00000545308	UBE2A	P49459	152 aa		2.68	□□□□□ -1.98
SNHG1-222	ENST00000545308	GFER	P55789	205 aa		2.68	□□□□□ -1.98
SNHG1-222	ENST00000545308	OR2B8P	P59922	312 aa		2.68	□□□□□ -1.98
SNHG1-222	ENST00000545308	RPL26	P61254	145 aa	Known RBP	2.68	□□□□□ -1.98
SNHG1-222	ENST00000545308	SLC35B1	P78383	322 aa		2.68	□□□□□ -1.98
SNHG1-222	ENST00000545308	GPR176	Q14439	515 aa		2.68	□□□□□ -1.98
SNHG1-222	ENST00000545308	SYCP1	Q15431	976 aa		2.68	□□□□□ -1.98
SNHG1-222	ENST00000545308	VAMP3	Q15836	100 aa		2.68	□□□□□ -1.98
SNHG1-222	ENST00000545308	DEFB113	Q30KQ7	82 aa		2.68	□□□□□ -1.98
SNHG1-222	ENST00000545308	OR2T5	Q6IEZ7	315 aa		2.68	□□□□□ -1.98
SNHG1-222	ENST00000545308	TMEM205	Q6UW68	189 aa		2.68	□□□□□ -1.98
SNHG1-222	ENST00000545308	TMPRSS11A	Q6ZMR5	421 aa		2.68	□□□□□ -1.98
SNHG1-222	ENST00000545308	C16orf47	Q6ZP98	133 aa	Predicted RBP	2.68	□□□□□ -1.98
SNHG1-222	ENST00000545308	FAM183BP	Q6ZVS7	135 aa		2.68	□□□□□ -1.98
SNHG1-222	ENST00000545308	SNX20	Q7Z614	316 aa		2.68	□□□□□ -1.98
SNHG1-222	ENST00000545308	RBM45	Q8IUH3	476 aa	Known RBP	2.68	□□□□□ -1.98
SNHG1-222	ENST00000545308	CDKL3	Q8IVW4	592 aa	Predicted RBP	2.68	□□□□□ -1.98
SNHG1-222	ENST00000545308	ZNF433	Q8N7K0	673 aa	Predicted RBP	2.68	□□□□□ -1.98
SNHG1-222	ENST00000545308	C15orf56	Q8N910	161 aa		2.68	□□□□□ -1.98

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