RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 LCN15Q6UWW0 184 aa5.05□□□□□ -1.6
VPS50-220ENST00000544910 LINC00596Q86U02 117 aa5.05□□□□□ -1.6
VPS50-220ENST00000544910 Q8IYB0 196 aa5.05□□□□□ -1.6
VPS50-220ENST00000544910 NHLRC2Q8NBF2 726 aa5.05□□□□□ -1.6
VPS50-220ENST00000544910 DYRK2Q92630 601 aa5.05□□□□□ -1.6
VPS50-220ENST00000544910 RPUSD4Q96CM3 377 aaKnown RBP5.05□□□□□ -1.6
VPS50-220ENST00000544910 HDHD3Q9BSH5 251 aaPredicted RBP5.05□□□□□ -1.6
VPS50-220ENST00000544910 CTDSP1Q9GZU7 261 aa5.05□□□□□ -1.6
VPS50-220ENST00000544910 MAGT1Q9H0U3 335 aa5.05□□□□□ -1.6
VPS50-220ENST00000544910 PSENENQ9NZ42 101 aa5.05□□□□□ -1.6
VPS50-220ENST00000544910 A0A1W2PPH5 198 aa5.05□□□□□ -1.6
VPS50-220ENST00000544910 LOC390937A0A1W2PQ73 354 aa5.05□□□□□ -1.6
VPS50-220ENST00000544910 CDRT15L2A8MXV6 281 aa5.05□□□□□ -1.6
VPS50-220ENST00000544910 K7EQM0 130 aa5.05□□□□□ -1.6
VPS50-220ENST00000544910 EFSO43281 561 aa5.05□□□□□ -1.6
VPS50-220ENST00000544910 KCNAB3O43448 404 aa5.05□□□□□ -1.6
VPS50-220ENST00000544910 MPLP40238 635 aa5.05□□□□□ -1.6
VPS50-220ENST00000544910 GALR1P47211 349 aa5.05□□□□□ -1.6
VPS50-220ENST00000544910 PRSS12P56730 875 aa5.05□□□□□ -1.6
VPS50-220ENST00000544910 TMEM33P57088 247 aa5.05□□□□□ -1.6
VPS50-220ENST00000544910 GNG3P63215 75 aa5.05□□□□□ -1.6
VPS50-220ENST00000544910 COX19Q49B96 90 aa5.05□□□□□ -1.6
VPS50-220ENST00000544910 AWAT1Q58HT5 328 aa5.05□□□□□ -1.6
VPS50-220ENST00000544910 TMEM211Q6ICI0 200 aa5.05□□□□□ -1.6
VPS50-220ENST00000544910 LIAT1Q6ZQX7 453 aa5.05□□□□□ -1.6
VPS50-220ENST00000544910 TBC1D26Q86UD7 250 aa5.05□□□□□ -1.6
VPS50-220ENST00000544910 MRPL24Q96A35 216 aaKnown RBP5.05□□□□□ -1.6
VPS50-220ENST00000544910 SPSB2Q99619 263 aa5.05□□□□□ -1.6
VPS50-220ENST00000544910 MS4A7Q9GZW8 240 aaPredicted RBP5.05□□□□□ -1.6
VPS50-220ENST00000544910 Q9N2K0 584 aa5.05□□□□□ -1.6
VPS50-220ENST00000544910 CHCHD2Q9Y6H1 151 aaPredicted RBP5.05□□□□□ -1.6
VPS50-220ENST00000544910 MUC22E2RYF6 1773 aaPredicted RBP5.05□□□□□ -1.6
VPS50-220ENST00000544910 PATE3B3GLJ2 98 aa5.05□□□□□ -1.6
VPS50-220ENST00000544910 TRDCB7Z8K6 153 aa5.05□□□□□ -1.6
VPS50-220ENST00000544910 RPL36A-HNRNPH2H7BZ11 118 aa5.05□□□□□ -1.6
VPS50-220ENST00000544910 IL2RAP01589 272 aa5.05□□□□□ -1.6
VPS50-220ENST00000544910 FCGR3AP08637 254 aa5.05□□□□□ -1.6
VPS50-220ENST00000544910 IAPPP10997 89 aa5.05□□□□□ -1.6
VPS50-220ENST00000544910 PRF1P14222 555 aa5.05□□□□□ -1.6
VPS50-220ENST00000544910 ELLP55199 621 aaPredicted RBP5.05□□□□□ -1.6
VPS50-220ENST00000544910 HLA-DRB3P79483 266 aa5.05□□□□□ -1.6
VPS50-220ENST00000544910 NAAAQ02083 359 aa5.05□□□□□ -1.6
VPS50-220ENST00000544910 ZNF154Q13106 437 aa5.05□□□□□ -1.6
VPS50-220ENST00000544910 KCNMB1Q16558 191 aa5.05□□□□□ -1.6
VPS50-220ENST00000544910 LTC4SQ16873 150 aa5.05□□□□□ -1.6
VPS50-220ENST00000544910 TMEM241Q24JQ0 296 aa5.05□□□□□ -1.6
VPS50-220ENST00000544910 TUSC1Q2TAM9 212 aa5.05□□□□□ -1.6
VPS50-220ENST00000544910 ZNF766Q5HY98 468 aa5.05□□□□□ -1.6
VPS50-220ENST00000544910 SPATA46Q5T0L3 261 aa5.05□□□□□ -1.6
VPS50-220ENST00000544910 NCMAPQ5T1S8 102 aa5.05□□□□□ -1.6
VPS50-220ENST00000544910 C17orf82Q86X59 251 aaPredicted RBP5.05□□□□□ -1.6
VPS50-220ENST00000544910 TUSC5Q8IXB3 177 aa5.05□□□□□ -1.6
VPS50-220ENST00000544910 OR2M7Q8NG81 312 aa5.05□□□□□ -1.6
VPS50-220ENST00000544910 OR5B3Q8NH48 314 aa5.05□□□□□ -1.6
VPS50-220ENST00000544910 CIB3Q96Q77 187 aaPredicted RBP5.05□□□□□ -1.6
VPS50-220ENST00000544910 TAAR6Q96RI8 345 aa5.05□□□□□ -1.6
VPS50-220ENST00000544910 SOX7Q9BT81 388 aa5.05□□□□□ -1.6
VPS50-220ENST00000544910 ADAT1Q9BUB4 502 aaKnown RBP5.05□□□□□ -1.6
VPS50-220ENST00000544910 KIF26AQ9ULI4 1882 aaPredicted RBP5.05□□□□□ -1.6
VPS50-220ENST00000544910 IGLV3-12A0A075B6K2 115 aa5.04□□□□□ -1.6
VPS50-220ENST00000544910 MPTX1A8MV57 137 aa5.04□□□□□ -1.6
VPS50-220ENST00000544910 CT45A6P0DMU7 189 aa5.04□□□□□ -1.6
VPS50-220ENST00000544910 CT45A5P0DMU8 189 aa5.04□□□□□ -1.6
VPS50-220ENST00000544910 CT45A7P0DMV0 189 aa5.04□□□□□ -1.6
VPS50-220ENST00000544910 PTGER4P35408 488 aa5.04□□□□□ -1.6
VPS50-220ENST00000544910 TAS2R45P59539 299 aa5.04□□□□□ -1.6
VPS50-220ENST00000544910 C2orf68Q2NKX9 166 aa5.04□□□□□ -1.6
VPS50-220ENST00000544910 SNAI3Q3KNW1 292 aa5.04□□□□□ -1.6
VPS50-220ENST00000544910 CT45A1Q5HYN5 189 aa5.04□□□□□ -1.6
VPS50-220ENST00000544910 OR2B11Q5JQS5 317 aa5.04□□□□□ -1.6
VPS50-220ENST00000544910 COL5A1-AS1Q5SY13 56 aa5.04□□□□□ -1.6
VPS50-220ENST00000544910 H2BFWTQ7Z2G1 175 aa5.04□□□□□ -1.6
VPS50-220ENST00000544910 CBLN2Q8IUK8 224 aa5.04□□□□□ -1.6
VPS50-220ENST00000544910 LINC00469Q8N7U9 141 aa5.04□□□□□ -1.6
VPS50-220ENST00000544910 CT45A3Q8NHU0 189 aa5.04□□□□□ -1.6
VPS50-220ENST00000544910 ABHD3Q8WU67 409 aa5.04□□□□□ -1.6
VPS50-220ENST00000544910 FAM122AQ96E09 287 aa5.04□□□□□ -1.6
VPS50-220ENST00000544910 C5orf66Q9H5L9 145 aa5.04□□□□□ -1.6
VPS50-220ENST00000544910 MMP24Q9Y5R2 645 aa5.04□□□□□ -1.6
VPS50-220ENST00000544910 LRRK1Q38SD2 2015 aa5.04□□□□□ -1.6
VPS50-220ENST00000544910 LOC105371267A0A1B0GV96 52 aa5.04□□□□□ -1.6
VPS50-220ENST00000544910 A0A1W2PP11 408 aa5.04□□□□□ -1.6
VPS50-220ENST00000544910 MPPED1O15442 326 aa5.04□□□□□ -1.6
VPS50-220ENST00000544910 CIDEAO60543 219 aa5.04□□□□□ -1.6
VPS50-220ENST00000544910 HSBP1O75506 76 aa5.04□□□□□ -1.6
VPS50-220ENST00000544910 DEDDO75618 318 aa5.04□□□□□ -1.6
VPS50-220ENST00000544910 MT-CO3P00414 261 aa5.04□□□□□ -1.6
VPS50-220ENST00000544910 CD200P41217 278 aa5.04□□□□□ -1.6
VPS50-220ENST00000544910 MAGEA5P43359 124 aa5.04□□□□□ -1.6
VPS50-220ENST00000544910 PCP4P48539 62 aa5.04□□□□□ -1.6
VPS50-220ENST00000544910 RBM11P57052 281 aaKnown RBP5.04□□□□□ -1.6
VPS50-220ENST00000544910 UBE2G2P60604 165 aa5.04□□□□□ -1.6
VPS50-220ENST00000544910 PLAURQ03405 335 aa5.04□□□□□ -1.6
VPS50-220ENST00000544910 ANKRD55Q3KP44 614 aa5.04□□□□□ -1.6
VPS50-220ENST00000544910 THNSL2Q86YJ6 484 aa5.04□□□□□ -1.6
VPS50-220ENST00000544910 RSRP1Q9BUV0 290 aa5.04□□□□□ -1.6
VPS50-220ENST00000544910 SMOC1Q9H4F8 434 aa5.04□□□□□ -1.6
VPS50-220ENST00000544910 TMEM9BQ9NQ34 198 aa5.04□□□□□ -1.6
VPS50-220ENST00000544910 OR5AC2Q9NZP5 309 aa5.04□□□□□ -1.6
VPS50-220ENST00000544910 CKAP5Q14008 2032 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms