RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 BTG1P62324 171 aa7.96□□□□□ -1.14
YBX3-215ENST00000544504 IL13RA1P78552 427 aa7.96□□□□□ -1.14
YBX3-215ENST00000544504 STUMQ69YW2 141 aa7.96□□□□□ -1.14
YBX3-215ENST00000544504 SIGIRRQ6IA17 410 aa7.96□□□□□ -1.14
YBX3-215ENST00000544504 DCDC5Q6ZRR9 648 aa7.96□□□□□ -1.14
YBX3-215ENST00000544504 MOB1BQ7L9L4 216 aa7.96□□□□□ -1.14
YBX3-215ENST00000544504 C6orf201Q7Z4U5 140 aa7.96□□□□□ -1.14
YBX3-215ENST00000544504 BATF2Q8N1L9 274 aa7.96□□□□□ -1.14
YBX3-215ENST00000544504 SUMF2Q8NBJ7 301 aa7.96□□□□□ -1.14
YBX3-215ENST00000544504 ANGPTL6Q8NI99 470 aa7.96□□□□□ -1.14
YBX3-215ENST00000544504 GPX8Q8TED1 209 aa7.96□□□□□ -1.14
YBX3-215ENST00000544504 PERPQ96FX8 193 aa7.96□□□□□ -1.14
YBX3-215ENST00000544504 SDSLQ96GA7 329 aa7.96□□□□□ -1.14
YBX3-215ENST00000544504 SNX22Q96L94 193 aa7.96□□□□□ -1.14
YBX3-215ENST00000544504 CMSS1Q9BQ75 279 aaKnown RBP7.96□□□□□ -1.14
YBX3-215ENST00000544504 THAP7Q9BT49 309 aaPredicted RBP7.96□□□□□ -1.14
YBX3-215ENST00000544504 DPCDQ9BVM2 203 aaPredicted RBP7.96□□□□□ -1.14
YBX3-215ENST00000544504 RAB9BQ9NP90 201 aa7.96□□□□□ -1.14
YBX3-215ENST00000544504 C12orf4Q9NQ89 552 aa7.96□□□□□ -1.14
YBX3-215ENST00000544504 IFT46Q9NQC8 304 aa7.96□□□□□ -1.14
YBX3-215ENST00000544504 ZNF701Q9NV72 531 aaPredicted RBP7.96□□□□□ -1.14
YBX3-215ENST00000544504 MTFP1Q9UDX5 166 aa7.96□□□□□ -1.14
YBX3-215ENST00000544504 TANC2Q9HCD6 1990 aa7.96□□□□□ -1.14
YBX3-215ENST00000544504 CHD3Q12873 2000 aaKnown RBP7.95□□□□□ -1.14
YBX3-215ENST00000544504 IGKV1D-17A0A075B6S4 117 aa7.95□□□□□ -1.14
YBX3-215ENST00000544504 TRAV24A0A0B4J272 114 aa7.95□□□□□ -1.14
YBX3-215ENST00000544504 C3orf80F5H4A9 247 aa7.95□□□□□ -1.14
YBX3-215ENST00000544504 NDUFS8O00217 210 aa7.95□□□□□ -1.14
YBX3-215ENST00000544504 SIRPB1O00241 398 aa7.95□□□□□ -1.14
YBX3-215ENST00000544504 SLC33A1O00400 549 aaPredicted RBP7.95□□□□□ -1.14
YBX3-215ENST00000544504 MGST3O14880 152 aa7.95□□□□□ -1.14
YBX3-215ENST00000544504 RP2O75695 350 aa7.95□□□□□ -1.14
YBX3-215ENST00000544504 CSF1P09603 554 aa7.95□□□□□ -1.14
YBX3-215ENST00000544504 IL7P13232 177 aa7.95□□□□□ -1.14
YBX3-215ENST00000544504 FAUP35544 74 aaKnown RBP7.95□□□□□ -1.14
YBX3-215ENST00000544504 PDLIM4P50479 330 aa7.95□□□□□ -1.14
YBX3-215ENST00000544504 PAX5Q02548 391 aa7.95□□□□□ -1.14
YBX3-215ENST00000544504 SRSF7Q16629 238 aaKnown RBP eCLIP7.95□□□□□ -1.14
YBX3-215ENST00000544504 TMEM155Q4W5P6 130 aa7.95□□□□□ -1.14
YBX3-215ENST00000544504 PLAC9Q5JTB6 97 aa7.95□□□□□ -1.14
YBX3-215ENST00000544504 ZNF788Q6ZQV5 615 aa7.95□□□□□ -1.14
YBX3-215ENST00000544504 DNM1P46Q6ZS02 220 aa7.95□□□□□ -1.14
YBX3-215ENST00000544504 NLRC3Q7RTR2 1065 aa7.95□□□□□ -1.14
YBX3-215ENST00000544504 TRAPPC6BQ86SZ2 158 aa7.95□□□□□ -1.14
YBX3-215ENST00000544504 SPICQ8N5J4 248 aa7.95□□□□□ -1.14
YBX3-215ENST00000544504 DTX3Q8N9I9 347 aa7.95□□□□□ -1.14
YBX3-215ENST00000544504 ASCC1Q8N9N2 400 aaKnown RBP7.95□□□□□ -1.14
YBX3-215ENST00000544504 OR52I2Q8NH67 350 aa7.95□□□□□ -1.14
YBX3-215ENST00000544504 SETD6Q8TBK2 473 aa7.95□□□□□ -1.14
YBX3-215ENST00000544504 YIPF5Q969M3 257 aa7.95□□□□□ -1.14
YBX3-215ENST00000544504 SEH1LQ96EE3 360 aa7.95□□□□□ -1.14
YBX3-215ENST00000544504 SULT4A1Q9BR01 284 aa7.95□□□□□ -1.14
YBX3-215ENST00000544504 OCSTAMPQ9BR26 566 aa7.95□□□□□ -1.14
YBX3-215ENST00000544504 C7orf50Q9BRJ6 194 aaKnown RBP7.95□□□□□ -1.14
YBX3-215ENST00000544504 FAAP24Q9BTP7 215 aa7.95□□□□□ -1.14
YBX3-215ENST00000544504 NCOR1P1Q9H4R4 102 aa7.95□□□□□ -1.14
YBX3-215ENST00000544504 ZMAT3Q9HA38 289 aaKnown RBP7.95□□□□□ -1.14
YBX3-215ENST00000544504 CHMP1AQ9HD42 196 aaPredicted RBP7.95□□□□□ -1.14
YBX3-215ENST00000544504 ETAA1Q9NY74 926 aa7.95□□□□□ -1.14
YBX3-215ENST00000544504 IL36RNQ9UBH0 155 aa7.95□□□□□ -1.14
YBX3-215ENST00000544504 KAAG1Q9UBP8 84 aa7.95□□□□□ -1.14
YBX3-215ENST00000544504 ZNF222Q9UK12 451 aa7.95□□□□□ -1.14
YBX3-215ENST00000544504 IGHV3OR15-7A0A075B7D8 119 aa7.94□□□□□ -1.14
YBX3-215ENST00000544504 TRBV6-6A0A0A6YYG2 114 aa7.94□□□□□ -1.14
YBX3-215ENST00000544504 TMEM30CPA0ZSE6 113 aa7.94□□□□□ -1.14
YBX3-215ENST00000544504 CENPXA8MT69 81 aa7.94□□□□□ -1.14
YBX3-215ENST00000544504 J3QRK9 145 aa7.94□□□□□ -1.14
YBX3-215ENST00000544504 K7N7A8 449 aa7.94□□□□□ -1.14
YBX3-215ENST00000544504 GPR37O15354 613 aa7.94□□□□□ -1.14
YBX3-215ENST00000544504 SIGLEC5O15389 551 aa7.94□□□□□ -1.14
YBX3-215ENST00000544504 PHF1O43189 567 aaPredicted RBP7.94□□□□□ -1.14
YBX3-215ENST00000544504 PPIHO43447 177 aaKnown RBP7.94□□□□□ -1.14
YBX3-215ENST00000544504 IGHV2-70P01814 119 aa7.94□□□□□ -1.14
YBX3-215ENST00000544504 COL8A2P25067 703 aa7.94□□□□□ -1.14
YBX3-215ENST00000544504 GPR6P46095 362 aaPredicted RBP7.94□□□□□ -1.14
YBX3-215ENST00000544504 ATP5J2P56134 94 aa7.94□□□□□ -1.14
YBX3-215ENST00000544504 TAS2R46P59540 309 aa7.94□□□□□ -1.14
YBX3-215ENST00000544504 TAS2R19P59542 299 aa7.94□□□□□ -1.14
YBX3-215ENST00000544504 DGCR2P98153 550 aa7.94□□□□□ -1.14
YBX3-215ENST00000544504 COL10A1Q03692 680 aa7.94□□□□□ -1.14
YBX3-215ENST00000544504 KRTAP1-1Q07627 177 aa7.94□□□□□ -1.14
YBX3-215ENST00000544504 MADCAM1Q13477 382 aa7.94□□□□□ -1.14
YBX3-215ENST00000544504 DYRK1AQ13627 763 aa7.94□□□□□ -1.14
YBX3-215ENST00000544504 ZMYND11Q15326 602 aa7.94□□□□□ -1.14
YBX3-215ENST00000544504 C11orf91Q3C1V1 193 aa7.94□□□□□ -1.14
YBX3-215ENST00000544504 ACTBL2Q562R1 376 aa7.94□□□□□ -1.14
YBX3-215ENST00000544504 LRRC10Q5BKY1 277 aa7.94□□□□□ -1.14
YBX3-215ENST00000544504 ZNF57Q68EA5 555 aaPredicted RBP7.94□□□□□ -1.14
YBX3-215ENST00000544504 SFRP4Q6FHJ7 346 aaPredicted RBP7.94□□□□□ -1.14
YBX3-215ENST00000544504 SLC35E4Q6ICL7 350 aa7.94□□□□□ -1.14
YBX3-215ENST00000544504 TRAT1Q6PIZ9 186 aa7.94□□□□□ -1.14
YBX3-215ENST00000544504 ZNF554Q86TJ5 538 aa7.94□□□□□ -1.14
YBX3-215ENST00000544504 TOMM5Q8N4H5 51 aa7.94□□□□□ -1.14
YBX3-215ENST00000544504 CD177Q8N6Q3 437 aa7.94□□□□□ -1.14
YBX3-215ENST00000544504 DEFB108BQ8NET1 73 aa7.94□□□□□ -1.14
YBX3-215ENST00000544504 GSX2Q9BZM3 304 aa7.94□□□□□ -1.14
YBX3-215ENST00000544504 TMEM165Q9HC07 324 aa7.94□□□□□ -1.14
YBX3-215ENST00000544504 ABCB10Q9NRK6 738 aa7.94□□□□□ -1.14
YBX3-215ENST00000544504 LPAR3Q9UBY5 353 aa7.94□□□□□ -1.14
YBX3-215ENST00000544504 MIOXQ9UGB7 285 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms