RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 ARPC4P59998 168 aa25.5■■□□□ 1.67
CCM2-219ENST00000544363 BTG1P62324 171 aa25.5■■□□□ 1.67
CCM2-219ENST00000544363 ZMYND11Q15326 602 aa25.5■■□□□ 1.67
CCM2-219ENST00000544363 TEX36Q5VZQ5 186 aa25.5■■□□□ 1.67
CCM2-219ENST00000544363 ZNF497Q6ZNH5 498 aa25.5■■□□□ 1.67
CCM2-219ENST00000544363 IDO2Q6ZQW0 420 aa25.5■■□□□ 1.67
CCM2-219ENST00000544363 ANGPTL6Q8NI99 470 aa25.5■■□□□ 1.67
CCM2-219ENST00000544363 SPOCK3Q9BQ16 436 aa25.5■■□□□ 1.67
CCM2-219ENST00000544363 GINS4Q9BRT9 223 aa25.5■■□□□ 1.67
CCM2-219ENST00000544363 TMEM106BQ9NUM4 274 aa25.5■■□□□ 1.67
CCM2-219ENST00000544363 ZNF222Q9UK12 451 aa25.5■■□□□ 1.67
CCM2-219ENST00000544363 TMEM82A0PJX8 343 aa25.49■■□□□ 1.67
CCM2-219ENST00000544363 FUOMA2VDF0 154 aa25.49■■□□□ 1.67
CCM2-219ENST00000544363 POM121CA8CG34 1229 aa25.49■■□□□ 1.67
CCM2-219ENST00000544363 GABRA2P47869 451 aa25.49■■□□□ 1.67
CCM2-219ENST00000544363 ATXN7L3Q14CW9 347 aaPredicted RBP25.49■■□□□ 1.67
CCM2-219ENST00000544363 CDK10Q15131 360 aa25.49■■□□□ 1.67
CCM2-219ENST00000544363 SCGB2B2Q4G0G5 96 aa25.49■■□□□ 1.67
CCM2-219ENST00000544363 C17orf107Q6ZR85 190 aa25.49■■□□□ 1.67
CCM2-219ENST00000544363 OVCH2Q7RTZ1 564 aa25.49■■□□□ 1.67
CCM2-219ENST00000544363 GAPTQ8N292 157 aa25.49■■□□□ 1.67
CCM2-219ENST00000544363 ARRDC1Q8N5I2 433 aa25.49■■□□□ 1.67
CCM2-219ENST00000544363 CCL17Q92583 94 aa25.49■■□□□ 1.67
CCM2-219ENST00000544363 TMEM178BH3BS89 294 aa25.48■■□□□ 1.67
CCM2-219ENST00000544363 ZNF205O95201 554 aa25.48■■□□□ 1.67
CCM2-219ENST00000544363 MUC1P15941 1255 aaPredicted RBP25.48■■□□□ 1.67
CCM2-219ENST00000544363 KCNJ3P48549 501 aa25.48■■□□□ 1.67
CCM2-219ENST00000544363 RAG2P55895 527 aa25.48■■□□□ 1.67
CCM2-219ENST00000544363 ZNF880Q6PDB4 577 aa25.48■■□□□ 1.67
CCM2-219ENST00000544363 C20orf204Q6ZNR8 217 aa25.48■■□□□ 1.67
CCM2-219ENST00000544363 EHFQ9NZC4 300 aa25.48■■□□□ 1.67
CCM2-219ENST00000544363 FLVCR2Q9UPI3 526 aa25.48■■□□□ 1.67
CCM2-219ENST00000544363 IGHV1-69-2A0A0G2JMI3 117 aa25.48■■□□□ 1.67
CCM2-219ENST00000544363 OOEPA6NGQ2 149 aa25.48■■□□□ 1.67
CCM2-219ENST00000544363 OR3A1P47881 315 aa25.48■■□□□ 1.67
CCM2-219ENST00000544363 BCAP31P51572 246 aa25.48■■□□□ 1.67
CCM2-219ENST00000544363 RAB25P57735 213 aa25.48■■□□□ 1.67
CCM2-219ENST00000544363 STUMQ69YW2 141 aa25.48■■□□□ 1.67
CCM2-219ENST00000544363 ASCC1Q8N9N2 400 aaKnown RBP25.48■■□□□ 1.67
CCM2-219ENST00000544363 SLC25A21Q9BQT8 299 aaPredicted RBP25.48■■□□□ 1.67
CCM2-219ENST00000544363 TRAF4Q9BUZ4 470 aaPredicted RBP25.48■■□□□ 1.67
CCM2-219ENST00000544363 SDCBPO00560 298 aaPredicted RBP25.47■■□□□ 1.67
CCM2-219ENST00000544363 GRK1Q15835 563 aa25.47■■□□□ 1.67
CCM2-219ENST00000544363 CADM3Q8N126 398 aa25.47■■□□□ 1.67
CCM2-219ENST00000544363 SHARPINQ9H0F6 387 aa25.47■■□□□ 1.67
CCM2-219ENST00000544363 RAB1BQ9H0U4 201 aa25.47■■□□□ 1.67
CCM2-219ENST00000544363 UBTD1Q9HAC8 227 aa25.47■■□□□ 1.67
CCM2-219ENST00000544363 ING3Q9NXR8 418 aa25.47■■□□□ 1.67
CCM2-219ENST00000544363 A0A0B4J293 547 aa25.46■■□□□ 1.67
CCM2-219ENST00000544363 ZNF737O75373 536 aa25.46■■□□□ 1.67
CCM2-219ENST00000544363 DHFRP00374 187 aa25.46■■□□□ 1.67
CCM2-219ENST00000544363 TSPAN5P62079 268 aa25.46■■□□□ 1.67
CCM2-219ENST00000544363 TATDN3Q17R31 274 aa25.46■■□□□ 1.67
CCM2-219ENST00000544363 TMEM17Q86X19 198 aa25.46■■□□□ 1.67
CCM2-219ENST00000544363 DEFB108BQ8NET1 73 aa25.46■■□□□ 1.67
CCM2-219ENST00000544363 OR13C8Q8NGS7 320 aa25.46■■□□□ 1.67
CCM2-219ENST00000544363 SNX22Q96L94 193 aa25.46■■□□□ 1.67
CCM2-219ENST00000544363 NECAP2Q9NVZ3 263 aa25.46■■□□□ 1.67
CCM2-219ENST00000544363 USP9XQ93008 2570 aaPredicted RBP25.45■■□□□ 1.67
CCM2-219ENST00000544363 LGALS8O00214 317 aa25.45■■□□□ 1.67
CCM2-219ENST00000544363 ARPC1BO15143 372 aaKnown RBP25.45■■□□□ 1.67
CCM2-219ENST00000544363 GSTT2P0CG29 244 aa25.45■■□□□ 1.67
CCM2-219ENST00000544363 SLC35E4Q6ICL7 350 aa25.45■■□□□ 1.67
CCM2-219ENST00000544363 TANC2Q9HCD6 1990 aa25.45■■□□□ 1.67
CCM2-219ENST00000544363 PPIAL4EA0A075B759 164 aa25.45■■□□□ 1.66
CCM2-219ENST00000544363 KIR2DS1A0A191URI9 304 aa25.45■■□□□ 1.66
CCM2-219ENST00000544363 PPIAL4DF5H284 164 aa25.45■■□□□ 1.66
CCM2-219ENST00000544363 PPIAL4FP0DN26 164 aa25.45■■□□□ 1.66
CCM2-219ENST00000544363 KIR2DS4P43632 304 aa25.45■■□□□ 1.66
CCM2-219ENST00000544363 KIR2DS1Q14954 304 aa25.45■■□□□ 1.66
CCM2-219ENST00000544363 MOB1BQ7L9L4 216 aa25.45■■□□□ 1.66
CCM2-219ENST00000544363 PPP1R35Q8TAP8 253 aa25.45■■□□□ 1.66
CCM2-219ENST00000544363 SDSLQ96GA7 329 aa25.45■■□□□ 1.66
CCM2-219ENST00000544363 LAMP3Q9UQV4 416 aa25.45■■□□□ 1.66
CCM2-219ENST00000544363 PPIAL4AQ9Y536 164 aa25.45■■□□□ 1.66
CCM2-219ENST00000544363 FLNCQ14315 2725 aa25.44■■□□□ 1.66
CCM2-219ENST00000544363 MYO18BQ8IUG5 2567 aa25.44■■□□□ 1.66
CCM2-219ENST00000544363 TRAV38-1A0A0B4J264 116 aa25.44■■□□□ 1.66
CCM2-219ENST00000544363 TMEM30CPA0ZSE6 113 aa25.44■■□□□ 1.66
CCM2-219ENST00000544363 TRDCB7Z8K6 153 aa25.44■■□□□ 1.66
CCM2-219ENST00000544363 PEX14O75381 377 aa25.44■■□□□ 1.66
CCM2-219ENST00000544363 FAM208BQ5VWN6 2430 aa25.43■■□□□ 1.66
CCM2-219ENST00000544363 RCC1P18754 421 aaPredicted RBP25.43■■□□□ 1.66
CCM2-219ENST00000544363 PAX5Q02548 391 aa25.43■■□□□ 1.66
CCM2-219ENST00000544363 AESQ08117 197 aa25.43■■□□□ 1.66
CCM2-219ENST00000544363 HFEQ30201 348 aa25.43■■□□□ 1.66
CCM2-219ENST00000544363 ZNF561Q8N587 486 aa25.43■■□□□ 1.66
CCM2-219ENST00000544363 TERB2Q8NHR7 220 aa25.43■■□□□ 1.66
CCM2-219ENST00000544363 CCDC107Q8WV48 283 aa25.43■■□□□ 1.66
CCM2-219ENST00000544363 MRGPRFQ96AM1 343 aa25.43■■□□□ 1.66
CCM2-219ENST00000544363 COQ2Q96H96 371 aa25.43■■□□□ 1.66
CCM2-219ENST00000544363 TRAPPC2LQ9UL33 140 aa25.43■■□□□ 1.66
CCM2-219ENST00000544363 MGAT4AQ9UM21 535 aa25.43■■□□□ 1.66
CCM2-219ENST00000544363 MAB21L2Q9Y586 359 aa25.43■■□□□ 1.66
CCM2-219ENST00000544363 UBR5O95071 2799 aaPredicted RBP25.42■■□□□ 1.66
CCM2-219ENST00000544363 FABP7O15540 132 aa25.42■■□□□ 1.66
CCM2-219ENST00000544363 GYPAP02724 150 aa25.42■■□□□ 1.66
CCM2-219ENST00000544363 OR5H8P0DN80 308 aa25.42■■□□□ 1.66
CCM2-219ENST00000544363 ZNF665Q9H7R5 613 aa25.42■■□□□ 1.66
CCM2-219ENST00000544363 ALG5Q9Y673 324 aa25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms