RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 ATG5Q9H1Y0 275 aa11.96□□□□□ -0.49
TNFRSF1A-216ENST00000543995 C19orf12Q9NSK7 152 aa11.96□□□□□ -0.49
TNFRSF1A-216ENST00000543995 PLEKHJ1Q9NW61 149 aa11.96□□□□□ -0.49
TNFRSF1A-216ENST00000543995 RCC2Q9P258 522 aaKnown RBP11.96□□□□□ -0.49
TNFRSF1A-216ENST00000543995 ONECUT1Q9UBC0 465 aa11.96□□□□□ -0.49
TNFRSF1A-216ENST00000543995 ETV7Q9Y603 341 aa11.96□□□□□ -0.49
TNFRSF1A-216ENST00000543995 A0A0A6YYD4 124 aa11.96□□□□□ -0.5
TNFRSF1A-216ENST00000543995 SOCS1O15524 211 aa11.96□□□□□ -0.5
TNFRSF1A-216ENST00000543995 PDCD6O75340 191 aa11.96□□□□□ -0.5
TNFRSF1A-216ENST00000543995 KCNJ3P48549 501 aa11.96□□□□□ -0.5
TNFRSF1A-216ENST00000543995 P2RX3P56373 397 aa11.96□□□□□ -0.5
TNFRSF1A-216ENST00000543995 TRAPPC6BQ86SZ2 158 aa11.96□□□□□ -0.5
TNFRSF1A-216ENST00000543995 OR5H6Q8NGV6 325 aa11.96□□□□□ -0.5
TNFRSF1A-216ENST00000543995 C8orf46Q8TAG6 207 aa11.96□□□□□ -0.5
TNFRSF1A-216ENST00000543995 AP3S1Q92572 193 aa11.96□□□□□ -0.5
TNFRSF1A-216ENST00000543995 C7orf69Q9H7B7 122 aa11.96□□□□□ -0.5
TNFRSF1A-216ENST00000543995 LPAR3Q9UBY5 353 aa11.96□□□□□ -0.5
TNFRSF1A-216ENST00000543995 RSL24D1Q9UHA3 163 aaKnown RBP11.96□□□□□ -0.5
TNFRSF1A-216ENST00000543995 SPATA2Q9UM82 520 aa11.96□□□□□ -0.5
TNFRSF1A-216ENST00000543995 ACANP16112 2415 aa11.95□□□□□ -0.5
TNFRSF1A-216ENST00000543995 A0A1W2PPH5 198 aa11.95□□□□□ -0.5
TNFRSF1A-216ENST00000543995 hADV38S2A0JD32 116 aa11.95□□□□□ -0.5
TNFRSF1A-216ENST00000543995 MEX3AA1L020 520 aaKnown RBP11.95□□□□□ -0.5
TNFRSF1A-216ENST00000543995 UBE2QL1A1L167 161 aa11.95□□□□□ -0.5
TNFRSF1A-216ENST00000543995 CHATP28329 748 aa11.95□□□□□ -0.5
TNFRSF1A-216ENST00000543995 ERP29P30040 261 aaKnown RBP11.95□□□□□ -0.5
TNFRSF1A-216ENST00000543995 GLIPR1P48060 266 aa11.95□□□□□ -0.5
TNFRSF1A-216ENST00000543995 TMEM200BQ69YZ2 307 aa11.95□□□□□ -0.5
TNFRSF1A-216ENST00000543995 Q6ZTK2 550 aa11.95□□□□□ -0.5
TNFRSF1A-216ENST00000543995 C6orf201Q7Z4U5 140 aa11.95□□□□□ -0.5
TNFRSF1A-216ENST00000543995 FAM89BQ8N5H3 189 aa11.95□□□□□ -0.5
TNFRSF1A-216ENST00000543995 LY6G5BQ8NDX9 201 aa11.95□□□□□ -0.5
TNFRSF1A-216ENST00000543995 PLPPR1Q8TBJ4 325 aa11.95□□□□□ -0.5
TNFRSF1A-216ENST00000543995 DACT3Q96B18 629 aaPredicted RBP11.95□□□□□ -0.5
TNFRSF1A-216ENST00000543995 PHF21AQ96BD5 680 aa11.95□□□□□ -0.5
TNFRSF1A-216ENST00000543995 KCTD12Q96CX2 325 aaKnown RBP11.95□□□□□ -0.5
TNFRSF1A-216ENST00000543995 COQ2Q96H96 371 aa11.95□□□□□ -0.5
TNFRSF1A-216ENST00000543995 RBM38Q9H0Z9 239 aaKnown RBP11.95□□□□□ -0.5
TNFRSF1A-216ENST00000543995 ETAA1Q9NY74 926 aa11.95□□□□□ -0.5
TNFRSF1A-216ENST00000543995 DSCAML1Q8TD84 2053 aa11.94□□□□□ -0.5
TNFRSF1A-216ENST00000543995 WNK2Q9Y3S1 2297 aa11.94□□□□□ -0.5
TNFRSF1A-216ENST00000543995 MEIKINA0A087WXM9 373 aa11.94□□□□□ -0.5
TNFRSF1A-216ENST00000543995 SMIM31A0A1B0GVY4 71 aa11.94□□□□□ -0.5
TNFRSF1A-216ENST00000543995 J3QLI3 93 aa11.94□□□□□ -0.5
TNFRSF1A-216ENST00000543995 GLAP06280 429 aa11.94□□□□□ -0.5
TNFRSF1A-216ENST00000543995 ZNF182P17025 639 aaPredicted RBP11.94□□□□□ -0.5
TNFRSF1A-216ENST00000543995 ARF6P62330 175 aa11.94□□□□□ -0.5
TNFRSF1A-216ENST00000543995 PAX8Q06710 450 aa11.94□□□□□ -0.5
TNFRSF1A-216ENST00000543995 ZNF273Q14593 569 aa11.94□□□□□ -0.5
TNFRSF1A-216ENST00000543995 CR1LQ2VPA4 569 aa11.94□□□□□ -0.5
TNFRSF1A-216ENST00000543995 METTL11BQ5VVY1 283 aa11.94□□□□□ -0.5
TNFRSF1A-216ENST00000543995 CMTM4Q8IZR5 234 aa11.94□□□□□ -0.5
TNFRSF1A-216ENST00000543995 FAAP24Q9BTP7 215 aa11.94□□□□□ -0.5
TNFRSF1A-216ENST00000543995 TMPRSS13Q9BYE2 586 aa11.94□□□□□ -0.5
TNFRSF1A-216ENST00000543995 RHBDL2Q9NX52 303 aa11.94□□□□□ -0.5
TNFRSF1A-216ENST00000543995 COMMD3Q9UBI1 195 aa11.94□□□□□ -0.5
TNFRSF1A-216ENST00000543995 KIF25Q9UIL4 384 aa11.94□□□□□ -0.5
TNFRSF1A-216ENST00000543995 AUP1Q9Y679 476 aa11.94□□□□□ -0.5
TNFRSF1A-216ENST00000543995 TRGV10A0A0A0MS01 117 aa11.93□□□□□ -0.5
TNFRSF1A-216ENST00000543995 TMEM30CPA0ZSE6 113 aa11.93□□□□□ -0.5
TNFRSF1A-216ENST00000543995 ODAMA1E959 279 aa11.93□□□□□ -0.5
TNFRSF1A-216ENST00000543995 A6NHS1 94 aa11.93□□□□□ -0.5
TNFRSF1A-216ENST00000543995 MEF2CQ06413 473 aaPredicted RBP11.93□□□□□ -0.5
TNFRSF1A-216ENST00000543995 MOGAT2Q3SYC2 334 aa11.93□□□□□ -0.5
TNFRSF1A-216ENST00000543995 RSBN1Q5VWQ0 802 aaPredicted RBP11.93□□□□□ -0.5
TNFRSF1A-216ENST00000543995 FOXB2Q5VYV0 432 aa11.93□□□□□ -0.5
TNFRSF1A-216ENST00000543995 SLC35E4Q6ICL7 350 aa11.93□□□□□ -0.5
TNFRSF1A-216ENST00000543995 MZT2AQ6P582 158 aa11.93□□□□□ -0.5
TNFRSF1A-216ENST00000543995 SAMD12Q8N8I0 201 aa11.93□□□□□ -0.5
TNFRSF1A-216ENST00000543995 OR10R2Q8NGX6 335 aa11.93□□□□□ -0.5
TNFRSF1A-216ENST00000543995 ACOT12Q8WYK0 555 aa11.93□□□□□ -0.5
TNFRSF1A-216ENST00000543995 DYRK2Q92630 601 aa11.93□□□□□ -0.5
TNFRSF1A-216ENST00000543995 RAB3CQ96E17 227 aa11.93□□□□□ -0.5
TNFRSF1A-216ENST00000543995 ARHGAP5-AS1Q96IT6 56 aa11.93□□□□□ -0.5
TNFRSF1A-216ENST00000543995 DMRTB1Q96MA1 342 aa11.93□□□□□ -0.5
TNFRSF1A-216ENST00000543995 SULT4A1Q9BR01 284 aa11.93□□□□□ -0.5
TNFRSF1A-216ENST00000543995 PCGF1Q9BSM1 259 aa11.93□□□□□ -0.5
TNFRSF1A-216ENST00000543995 NDUFA13Q9P0J0 144 aa11.93□□□□□ -0.5
TNFRSF1A-216ENST00000543995 LINC00312Q9Y6C7 94 aa11.93□□□□□ -0.5
TNFRSF1A-216ENST00000543995 F8P00451 2351 aa11.93□□□□□ -0.5
TNFRSF1A-216ENST00000543995 A0A075B6Q4 140 aa11.92□□□□□ -0.5
TNFRSF1A-216ENST00000543995 SCGNO76038 276 aa11.92□□□□□ -0.5
TNFRSF1A-216ENST00000543995 TOX4O94842 621 aa11.92□□□□□ -0.5
TNFRSF1A-216ENST00000543995 CCL3L1P16619 93 aa11.92□□□□□ -0.5
TNFRSF1A-216ENST00000543995 TMEM50BP56557 158 aa11.92□□□□□ -0.5
TNFRSF1A-216ENST00000543995 UBE2NLQ5JXB2 153 aa11.92□□□□□ -0.5
TNFRSF1A-216ENST00000543995 ZNF565Q8N9K5 539 aa11.92□□□□□ -0.5
TNFRSF1A-216ENST00000543995 DYNC2LI1Q8TCX1 351 aa11.92□□□□□ -0.5
TNFRSF1A-216ENST00000543995 ZNF714Q96N38 554 aa11.92□□□□□ -0.5
TNFRSF1A-216ENST00000543995 WDFY2Q96P53 400 aa11.92□□□□□ -0.5
TNFRSF1A-216ENST00000543995 PECRQ9BY49 303 aa11.92□□□□□ -0.5
TNFRSF1A-216ENST00000543995 OR6C3Q9NZP0 311 aa11.92□□□□□ -0.5
TNFRSF1A-216ENST00000543995 HSF4Q9ULV5 492 aa11.92□□□□□ -0.5
TNFRSF1A-216ENST00000543995 UBE2J1Q9Y385 318 aaPredicted RBP11.92□□□□□ -0.5
TNFRSF1A-216ENST00000543995 KPTNQ9Y664 436 aa11.92□□□□□ -0.5
TNFRSF1A-216ENST00000543995 KIAA2026Q5HYC2 2103 aa11.92□□□□□ -0.5
TNFRSF1A-216ENST00000543995 MAST4O15021 2626 aa11.92□□□□□ -0.5
TNFRSF1A-216ENST00000543995 hCG_1809904A0A1W2PP81 198 aa11.91□□□□□ -0.5
TNFRSF1A-216ENST00000543995 A0A1W2PPE2 198 aa11.91□□□□□ -0.5
TNFRSF1A-216ENST00000543995 A0A1W2PR64 198 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms