RNA–Protein interactions for RNA: ENST00000543768.1

SCNN1A-221, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCNN1A, Length 2,361 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-221ENST00000543768 SCGB1D2O95969 90 aa13.75□□□□□ -0.21
SCNN1A-221ENST00000543768 SPP1P10451 314 aa13.75□□□□□ -0.21
SCNN1A-221ENST00000543768 RCC1P18754 421 aaPredicted RBP13.75□□□□□ -0.21
SCNN1A-221ENST00000543768 SPINK2P20155 84 aa13.75□□□□□ -0.21
SCNN1A-221ENST00000543768 KCNJ3P48549 501 aa13.75□□□□□ -0.21
SCNN1A-221ENST00000543768 PMP22Q01453 160 aa13.75□□□□□ -0.21
SCNN1A-221ENST00000543768 PIP4P1Q86T03 277 aa13.75□□□□□ -0.21
SCNN1A-221ENST00000543768 LGI3Q8N145 548 aa13.75□□□□□ -0.21
SCNN1A-221ENST00000543768 CCDC71LQ8N9Z2 235 aa13.75□□□□□ -0.21
SCNN1A-221ENST00000543768 TAF9BQ9HBM6 251 aa13.75□□□□□ -0.21
SCNN1A-221ENST00000543768 LPAR3Q9UBY5 353 aa13.75□□□□□ -0.21
SCNN1A-221ENST00000543768 MPC1Q9Y5U8 109 aa13.75□□□□□ -0.21
SCNN1A-221ENST00000543768 ANKRD30BLA7E2S9 258 aa13.75□□□□□ -0.21
SCNN1A-221ENST00000543768 PHF1O43189 567 aaPredicted RBP13.75□□□□□ -0.21
SCNN1A-221ENST00000543768 TNFSF10P50591 281 aa13.75□□□□□ -0.21
SCNN1A-221ENST00000543768 HERPUD1Q15011 391 aa13.75□□□□□ -0.21
SCNN1A-221ENST00000543768 TMEM268Q5VZI3 342 aa13.75□□□□□ -0.21
SCNN1A-221ENST00000543768 ZNF488Q96MN9 340 aa13.75□□□□□ -0.21
SCNN1A-221ENST00000543768 ADAT1Q9BUB4 502 aaKnown RBP13.75□□□□□ -0.21
SCNN1A-221ENST00000543768 FBXL17Q9UF56 701 aa13.75□□□□□ -0.21
SCNN1A-221ENST00000543768 LHX6Q9UPM6 363 aa13.75□□□□□ -0.21
SCNN1A-221ENST00000543768 HSPB6O14558 160 aa13.74□□□□□ -0.21
SCNN1A-221ENST00000543768 MPPED1O15442 326 aa13.74□□□□□ -0.21
SCNN1A-221ENST00000543768 EIF3GO75821 320 aaKnown RBP eCLIP13.74□□□□□ -0.21
SCNN1A-221ENST00000543768 NOVA1P51513 510 aaKnown RBP13.74□□□□□ -0.21
SCNN1A-221ENST00000543768 TMEM33P57088 247 aa13.74□□□□□ -0.21
SCNN1A-221ENST00000543768 EIF5AP63241 154 aaKnown RBP13.74□□□□□ -0.21
SCNN1A-221ENST00000543768 AVPI1Q5T686 147 aa13.74□□□□□ -0.21
SCNN1A-221ENST00000543768 OR2T2Q6IF00 324 aa13.74□□□□□ -0.21
SCNN1A-221ENST00000543768 VASH2Q86V25 355 aa13.74□□□□□ -0.21
SCNN1A-221ENST00000543768 OR52M1Q8NGK5 317 aa13.74□□□□□ -0.21
SCNN1A-221ENST00000543768 ARL11Q969Q4 196 aa13.74□□□□□ -0.21
SCNN1A-221ENST00000543768 FRYQ5TBA9 3013 aa13.74□□□□□ -0.21
SCNN1A-221ENST00000543768 OR5B21A6NL26 309 aa13.74□□□□□ -0.21
SCNN1A-221ENST00000543768 ZNF705EA8MWA4 302 aaPredicted RBP13.74□□□□□ -0.21
SCNN1A-221ENST00000543768 CDRT15L2A8MXV6 281 aa13.74□□□□□ -0.21
SCNN1A-221ENST00000543768 DIRAS3O95661 229 aa13.74□□□□□ -0.21
SCNN1A-221ENST00000543768 ACAA1P09110 424 aaPredicted RBP13.74□□□□□ -0.21
SCNN1A-221ENST00000543768 AKR1C2P52895 323 aa13.74□□□□□ -0.21
SCNN1A-221ENST00000543768 GNG3P63215 75 aa13.74□□□□□ -0.21
SCNN1A-221ENST00000543768 AKR1C1Q04828 323 aa13.74□□□□□ -0.21
SCNN1A-221ENST00000543768 C10orf91Q5T1B1 145 aa13.74□□□□□ -0.21
SCNN1A-221ENST00000543768 ZNF573Q86YE8 665 aa13.74□□□□□ -0.21
SCNN1A-221ENST00000543768 OR4A4PQ8NGN8 299 aa13.74□□□□□ -0.21
SCNN1A-221ENST00000543768 NANPQ8TBE9 248 aa13.74□□□□□ -0.21
SCNN1A-221ENST00000543768 C2CD4CQ8TF44 421 aa13.74□□□□□ -0.21
SCNN1A-221ENST00000543768 NANOS1Q8WY41 292 aaKnown RBP13.74□□□□□ -0.21
SCNN1A-221ENST00000543768 SMIM8Q96KF7 97 aa13.74□□□□□ -0.21
SCNN1A-221ENST00000543768 PLEKHA2Q9HB19 425 aa13.74□□□□□ -0.21
SCNN1A-221ENST00000543768 ZFP57Q9NU63 452 aa13.74□□□□□ -0.21
SCNN1A-221ENST00000543768 PLA2G2EQ9NZK7 142 aa13.74□□□□□ -0.21
SCNN1A-221ENST00000543768 CARHSP1Q9Y2V2 147 aaKnown RBP13.74□□□□□ -0.21
SCNN1A-221ENST00000543768 IGKV1-6A0A0C4DH72 117 aa13.73□□□□□ -0.21
SCNN1A-221ENST00000543768 C3orf85A0A1B0GTC6 90 aa13.73□□□□□ -0.21
SCNN1A-221ENST00000543768 E5RGE8 158 aa13.73□□□□□ -0.21
SCNN1A-221ENST00000543768 C3orf80F5H4A9 247 aa13.73□□□□□ -0.21
SCNN1A-221ENST00000543768 GAPDHP04406 335 aaKnown RBP13.73□□□□□ -0.21
SCNN1A-221ENST00000543768 CRYBA1P05813 215 aa13.73□□□□□ -0.21
SCNN1A-221ENST00000543768 FABP1P07148 127 aa13.73□□□□□ -0.21
SCNN1A-221ENST00000543768 SRSF3P84103 164 aaKnown RBP13.73□□□□□ -0.21
SCNN1A-221ENST00000543768 SRSF6Q13247 344 aaKnown RBP13.73□□□□□ -0.21
SCNN1A-221ENST00000543768 IGFBP7Q16270 282 aa13.73□□□□□ -0.21
SCNN1A-221ENST00000543768 SPATA46Q5T0L3 261 aa13.73□□□□□ -0.21
SCNN1A-221ENST00000543768 MYPOPQ86VE0 399 aaPredicted RBP13.73□□□□□ -0.21
SCNN1A-221ENST00000543768 SUMF2Q8NBJ7 301 aa13.73□□□□□ -0.21
SCNN1A-221ENST00000543768 SUMF1Q8NBK3 374 aa13.73□□□□□ -0.21
SCNN1A-221ENST00000543768 ERGIC1Q969X5 290 aa13.73□□□□□ -0.21
SCNN1A-221ENST00000543768 PLK3Q9H4B4 646 aa13.73□□□□□ -0.21
SCNN1A-221ENST00000543768 MMP26Q9NRE1 261 aa13.73□□□□□ -0.21
SCNN1A-221ENST00000543768 NSG2Q9Y328 171 aa13.73□□□□□ -0.21
SCNN1A-221ENST00000543768 ATP23Q9Y6H3 246 aa13.73□□□□□ -0.21
SCNN1A-221ENST00000543768 NKX2-8O15522 239 aa13.73□□□□□ -0.21
SCNN1A-221ENST00000543768 SNAPINO95295 136 aa13.73□□□□□ -0.21
SCNN1A-221ENST00000543768 TK1P04183 234 aa13.73□□□□□ -0.21
SCNN1A-221ENST00000543768 CA6P23280 308 aa13.73□□□□□ -0.21
SCNN1A-221ENST00000543768 CD82P27701 267 aa13.73□□□□□ -0.21
SCNN1A-221ENST00000543768 IL24Q13007 206 aa13.73□□□□□ -0.21
SCNN1A-221ENST00000543768 C20orf204Q6ZNR8 217 aa13.73□□□□□ -0.21
SCNN1A-221ENST00000543768 LINC00596Q86U02 117 aa13.73□□□□□ -0.21
SCNN1A-221ENST00000543768 SLC35G3Q8N808 338 aa13.73□□□□□ -0.21
SCNN1A-221ENST00000543768 NEK7Q8TDX7 302 aa13.73□□□□□ -0.21
SCNN1A-221ENST00000543768 SAT2Q96F10 170 aaPredicted RBP13.73□□□□□ -0.21
SCNN1A-221ENST00000543768 BSCL2Q96G97 398 aaPredicted RBP13.73□□□□□ -0.21
SCNN1A-221ENST00000543768 GMPPAQ96IJ6 420 aaPredicted RBP13.73□□□□□ -0.21
SCNN1A-221ENST00000543768 OR51I2Q9H344 312 aa13.73□□□□□ -0.21
SCNN1A-221ENST00000543768 TMED3Q9Y3Q3 217 aa13.73□□□□□ -0.21
SCNN1A-221ENST00000543768 URB1O60287 2271 aaKnown RBP13.72□□□□□ -0.21
SCNN1A-221ENST00000543768 NUDT19A8MXV4 375 aa13.72□□□□□ -0.21
SCNN1A-221ENST00000543768 TRDCB7Z8K6 153 aa13.72□□□□□ -0.21
SCNN1A-221ENST00000543768 TUSC2O75896 110 aa13.72□□□□□ -0.21
SCNN1A-221ENST00000543768 JTBO76095 146 aa13.72□□□□□ -0.21
SCNN1A-221ENST00000543768 CELA3BP08861 270 aa13.72□□□□□ -0.21
SCNN1A-221ENST00000543768 SMIM6P0DI80 62 aa13.72□□□□□ -0.21
SCNN1A-221ENST00000543768 ZNF14P17017 642 aaPredicted RBP13.72□□□□□ -0.21
SCNN1A-221ENST00000543768 BLOC1S1P78537 153 aa13.72□□□□□ -0.21
SCNN1A-221ENST00000543768 EIF5AL1Q6IS14 154 aaKnown RBP13.72□□□□□ -0.21
SCNN1A-221ENST00000543768 ZNF818PQ6ZRF7 136 aa13.72□□□□□ -0.21
SCNN1A-221ENST00000543768 FAM185AQ8N0U4 392 aa13.72□□□□□ -0.21
SCNN1A-221ENST00000543768 C17orf78Q8N4C9 275 aa13.72□□□□□ -0.21
SCNN1A-221ENST00000543768 MRPL30Q8TCC3 161 aaKnown RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms