RNA–Protein interactions for RNA: ENST00000543721.1

LMO3-229, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 3,626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-229ENST00000543721 PRRC2BQ5JSZ5 2229 aaKnown RBP4.34□□□□□ -1.72
LMO3-229ENST00000543721 IGKV1D-8A0A087WSZ0 117 aa4.33□□□□□ -1.72
LMO3-229ENST00000543721 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.33□□□□□ -1.72
LMO3-229ENST00000543721 CNOT4O95628 575 aaKnown RBP4.33□□□□□ -1.72
LMO3-229ENST00000543721 IGLV3-1P01715 115 aa4.33□□□□□ -1.72
LMO3-229ENST00000543721 CTXN2P0C2S0 81 aa4.33□□□□□ -1.72
LMO3-229ENST00000543721 OR4A8P0C604 315 aa4.33□□□□□ -1.72
LMO3-229ENST00000543721 MDH2P40926 338 aaKnown RBP4.33□□□□□ -1.72
LMO3-229ENST00000543721 RPL19P84098 196 aaKnown RBP4.33□□□□□ -1.72
LMO3-229ENST00000543721 ZNF92Q03936 586 aa4.33□□□□□ -1.72
LMO3-229ENST00000543721 TMEM41BQ5BJD5 291 aa4.33□□□□□ -1.72
LMO3-229ENST00000543721 TMEM31Q5JXX7 168 aa4.33□□□□□ -1.72
LMO3-229ENST00000543721 SLC25A47Q6Q0C1 308 aa4.33□□□□□ -1.72
LMO3-229ENST00000543721 SSX7Q7RTT5 188 aa4.33□□□□□ -1.72
LMO3-229ENST00000543721 OR2D3Q8NGH3 330 aa4.33□□□□□ -1.72
LMO3-229ENST00000543721 TMEM171Q8WVE6 324 aa4.33□□□□□ -1.72
LMO3-229ENST00000543721 TMEM37Q8WXS4 190 aa4.33□□□□□ -1.72
LMO3-229ENST00000543721 GAL3ST4Q96RP7 486 aa4.33□□□□□ -1.72
LMO3-229ENST00000543721 TBX15Q96SF7 602 aa4.33□□□□□ -1.72
LMO3-229ENST00000543721 MRPL13Q9BYD1 178 aaKnown RBP4.33□□□□□ -1.72
LMO3-229ENST00000543721 ZNF160Q9HCG1 818 aa4.33□□□□□ -1.72
LMO3-229ENST00000543721 SLC39A9Q9NUM3 307 aa4.33□□□□□ -1.72
LMO3-229ENST00000543721 SERGEFQ9UGK8 458 aa4.33□□□□□ -1.72
LMO3-229ENST00000543721 POLR3KQ9Y2Y1 108 aaPredicted RBP4.33□□□□□ -1.72
LMO3-229ENST00000543721 EP400Q96L91 3159 aa4.33□□□□□ -1.72
LMO3-229ENST00000543721 TRAV9-1A0A075B6T8 112 aa4.33□□□□□ -1.72
LMO3-229ENST00000543721 ZNF737O75373 536 aa4.33□□□□□ -1.72
LMO3-229ENST00000543721 MMP23AO75900 390 aa4.33□□□□□ -1.72
LMO3-229ENST00000543721 GNRH1P01148 92 aa4.33□□□□□ -1.72
LMO3-229ENST00000543721 PPYP01298 95 aa4.33□□□□□ -1.72
LMO3-229ENST00000543721 IGKV3-11P04433 115 aa4.33□□□□□ -1.72
LMO3-229ENST00000543721 HLA-DOBP13765 273 aa4.33□□□□□ -1.72
LMO3-229ENST00000543721 CTSEP14091 401 aa4.33□□□□□ -1.72
LMO3-229ENST00000543721 FKBP2P26885 142 aaKnown RBP4.33□□□□□ -1.72
LMO3-229ENST00000543721 VIPR2P41587 438 aa4.33□□□□□ -1.72
LMO3-229ENST00000543721 MEF2BQ02080 365 aaPredicted RBP4.33□□□□□ -1.72
LMO3-229ENST00000543721 C17orf67Q0P5P2 114 aa4.33□□□□□ -1.72
LMO3-229ENST00000543721 MALLQ13021 153 aa4.33□□□□□ -1.72
LMO3-229ENST00000543721 NKAIN1Q4KMZ8 207 aa4.33□□□□□ -1.72
LMO3-229ENST00000543721 SELENOHQ8IZQ5 122 aaKnown RBP4.33□□□□□ -1.72
LMO3-229ENST00000543721 D2HGDHQ8N465 521 aa4.33□□□□□ -1.72
LMO3-229ENST00000543721 REEP6Q96HR9 211 aa4.33□□□□□ -1.72
LMO3-229ENST00000543721 GMPPAQ96IJ6 420 aaPredicted RBP4.33□□□□□ -1.72
LMO3-229ENST00000543721 LPAR2Q9HBW0 351 aa4.33□□□□□ -1.72
LMO3-229ENST00000543721 GLRX2Q9NS18 164 aa4.33□□□□□ -1.72
LMO3-229ENST00000543721 FUT9Q9Y231 359 aa4.33□□□□□ -1.72
LMO3-229ENST00000543721 CST7O76096 145 aa4.33□□□□□ -1.72
LMO3-229ENST00000543721 SYNGR4O95473 234 aa4.33□□□□□ -1.72
LMO3-229ENST00000543721 SEMA4FO95754 770 aa4.33□□□□□ -1.72
LMO3-229ENST00000543721 UMODP07911 640 aa4.33□□□□□ -1.72
LMO3-229ENST00000543721 NPSP0C0P6 89 aa4.33□□□□□ -1.72
LMO3-229ENST00000543721 ZNF17P17021 662 aa4.33□□□□□ -1.72
LMO3-229ENST00000543721 HNRNPA2B1P22626 353 aaKnown RBP4.33□□□□□ -1.72
LMO3-229ENST00000543721 GNRHRP30968 328 aa4.33□□□□□ -1.72
LMO3-229ENST00000543721 BRS3P32247 399 aa4.33□□□□□ -1.72
LMO3-229ENST00000543721 ASCL1P50553 236 aa4.33□□□□□ -1.72
LMO3-229ENST00000543721 EFNA3P52797 238 aa4.33□□□□□ -1.72
LMO3-229ENST00000543721 RPL23P62829 140 aaKnown RBP4.33□□□□□ -1.72
LMO3-229ENST00000543721 RUNX3Q13761 415 aa4.33□□□□□ -1.72
LMO3-229ENST00000543721 Q6ZS49 121 aa4.33□□□□□ -1.72
LMO3-229ENST00000543721 LHFPL2Q6ZUX7 228 aa4.33□□□□□ -1.72
LMO3-229ENST00000543721 NUFIP2Q7Z417 695 aaKnown RBP4.33□□□□□ -1.72
LMO3-229ENST00000543721 CPEB2Q7Z5Q1 589 aaKnown RBP4.33□□□□□ -1.72
LMO3-229ENST00000543721 GJC3Q8NFK1 279 aa4.33□□□□□ -1.72
LMO3-229ENST00000543721 OR5D13Q8NGL4 314 aa4.33□□□□□ -1.72
LMO3-229ENST00000543721 C22orf15Q8WYQ4 148 aa4.33□□□□□ -1.72
LMO3-229ENST00000543721 LHX4Q969G2 390 aa4.33□□□□□ -1.72
LMO3-229ENST00000543721 TSACCQ96A04 125 aaPredicted RBP4.33□□□□□ -1.72
LMO3-229ENST00000543721 ZNF524Q96C55 264 aa4.33□□□□□ -1.72
LMO3-229ENST00000543721 TECTBQ96PL2 329 aa4.33□□□□□ -1.72
LMO3-229ENST00000543721 PCGF1Q9BSM1 259 aa4.33□□□□□ -1.72
LMO3-229ENST00000543721 FAAP24Q9BTP7 215 aa4.33□□□□□ -1.72
LMO3-229ENST00000543721 VAMP8Q9BV40 100 aa4.33□□□□□ -1.72
LMO3-229ENST00000543721 OR2J1Q9GZK6 312 aa4.33□□□□□ -1.72
LMO3-229ENST00000543721 OR51B6Q9H340 312 aa4.33□□□□□ -1.72
LMO3-229ENST00000543721 RBKSQ9H477 322 aa4.33□□□□□ -1.72
LMO3-229ENST00000543721 ZNF665Q9H7R5 613 aa4.33□□□□□ -1.72
LMO3-229ENST00000543721 RPRMQ9NS64 109 aa4.33□□□□□ -1.72
LMO3-229ENST00000543721 TMEM106BQ9NUM4 274 aa4.33□□□□□ -1.72
LMO3-229ENST00000543721 IL36GQ9NZH8 169 aa4.33□□□□□ -1.72
LMO3-229ENST00000543721 TBX21Q9UL17 535 aa4.33□□□□□ -1.72
LMO3-229ENST00000543721 CACNA1IQ9P0X4 2223 aa4.33□□□□□ -1.72
LMO3-229ENST00000543721 IGKV1D-43A0A0B4J1Z2 117 aa4.32□□□□□ -1.72
LMO3-229ENST00000543721 C20orf202A1L168 122 aa4.32□□□□□ -1.72
LMO3-229ENST00000543721 FAM221AA4D161 298 aa4.32□□□□□ -1.72
LMO3-229ENST00000543721 LIPT2A6NK58 231 aa4.32□□□□□ -1.72
LMO3-229ENST00000543721 SIAH2O43255 324 aa4.32□□□□□ -1.72
LMO3-229ENST00000543721 ADAM20O43506 726 aa4.32□□□□□ -1.72
LMO3-229ENST00000543721 CHST1O43916 411 aa4.32□□□□□ -1.72
LMO3-229ENST00000543721 ONECUT2O95948 504 aa4.32□□□□□ -1.72
LMO3-229ENST00000543721 PDGFBP01127 241 aaPredicted RBP4.32□□□□□ -1.72
LMO3-229ENST00000543721 MMP7P09237 267 aaPredicted RBP4.32□□□□□ -1.72
LMO3-229ENST00000543721 TCN2P20062 427 aa4.32□□□□□ -1.72
LMO3-229ENST00000543721 KLF3P57682 345 aaPredicted RBP4.32□□□□□ -1.72
LMO3-229ENST00000543721 ERVS71-1P61550 626 aa4.32□□□□□ -1.72
LMO3-229ENST00000543721 DEFB103AP81534 67 aa4.32□□□□□ -1.72
LMO3-229ENST00000543721 MRPS34P82930 218 aaKnown RBP4.32□□□□□ -1.72
LMO3-229ENST00000543721 RUNX1Q01196 453 aa4.32□□□□□ -1.72
LMO3-229ENST00000543721 LCN15Q6UWW0 184 aa4.32□□□□□ -1.72
LMO3-229ENST00000543721 ASCL4Q6XD76 172 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms