RNA–Protein interactions for RNA: ENST00000543555.5

MSH2-206, Transcript of mutS homolog 2, humanhuman

TSL 2 BASIC

Gene MSH2, Length 3,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-206ENST00000543555 SVILO95425 2214 aa11.89□□□□□ -0.51
MSH2-206ENST00000543555 DIRAS3O95661 229 aa11.88□□□□□ -0.51
MSH2-206ENST00000543555 MBPP02686 304 aaPredicted RBP11.88□□□□□ -0.51
MSH2-206ENST00000543555 SCTP09683 121 aa11.88□□□□□ -0.51
MSH2-206ENST00000543555 IL24Q13007 206 aa11.88□□□□□ -0.51
MSH2-206ENST00000543555 TBC1D28Q2M2D7 210 aa11.88□□□□□ -0.51
MSH2-206ENST00000543555 SPATA46Q5T0L3 261 aa11.88□□□□□ -0.51
MSH2-206ENST00000543555 UQCC3Q6UW78 93 aa11.88□□□□□ -0.51
MSH2-206ENST00000543555 FDCSPQ8NFU4 85 aa11.88□□□□□ -0.51
MSH2-206ENST00000543555 LHFPL5Q8TAF8 219 aa11.88□□□□□ -0.51
MSH2-206ENST00000543555 SPACA1Q9HBV2 294 aa11.88□□□□□ -0.51
MSH2-206ENST00000543555 IGHG3P01860 377 aa11.88□□□□□ -0.51
MSH2-206ENST00000543555 APOC3P02656 99 aa11.88□□□□□ -0.51
MSH2-206ENST00000543555 TK1P04183 234 aa11.88□□□□□ -0.51
MSH2-206ENST00000543555 CA6P23280 308 aa11.88□□□□□ -0.51
MSH2-206ENST00000543555 IL32P24001 234 aa11.88□□□□□ -0.51
MSH2-206ENST00000543555 BTN1A1Q13410 526 aa11.88□□□□□ -0.51
MSH2-206ENST00000543555 FAM185AQ8N0U4 392 aa11.88□□□□□ -0.51
MSH2-206ENST00000543555 TP53RKQ96S44 253 aa11.88□□□□□ -0.51
MSH2-206ENST00000543555 PKIBQ9C010 78 aa11.88□□□□□ -0.51
MSH2-206ENST00000543555 CLCF1Q9UBD9 225 aa11.88□□□□□ -0.51
MSH2-206ENST00000543555 FBXO9Q9UK97 447 aaPredicted RBP11.88□□□□□ -0.51
MSH2-206ENST00000543555 LHX6Q9UPM6 363 aa11.88□□□□□ -0.51
MSH2-206ENST00000543555 BSNQ9UPA5 3926 aa11.87□□□□□ -0.51
MSH2-206ENST00000543555 KIR2DS1A0A191URI9 304 aa11.87□□□□□ -0.51
MSH2-206ENST00000543555 BET1O15155 118 aa11.87□□□□□ -0.51
MSH2-206ENST00000543555 MPPED1O15442 326 aa11.87□□□□□ -0.51
MSH2-206ENST00000543555 KLK10O43240 276 aa11.87□□□□□ -0.51
MSH2-206ENST00000543555 ZNF14P17017 642 aaPredicted RBP11.87□□□□□ -0.51
MSH2-206ENST00000543555 GNRHRP30968 328 aa11.87□□□□□ -0.51
MSH2-206ENST00000543555 KIR2DS4P43632 304 aa11.87□□□□□ -0.51
MSH2-206ENST00000543555 KIR2DS1Q14954 304 aa11.87□□□□□ -0.51
MSH2-206ENST00000543555 HERPUD1Q15011 391 aa11.87□□□□□ -0.51
MSH2-206ENST00000543555 MYPOPQ86VE0 399 aaPredicted RBP11.87□□□□□ -0.51
MSH2-206ENST00000543555 SUMF2Q8NBJ7 301 aa11.87□□□□□ -0.51
MSH2-206ENST00000543555 PLEKHA2Q9HB19 425 aa11.87□□□□□ -0.51
MSH2-206ENST00000543555 TAF9BQ9HBM6 251 aa11.87□□□□□ -0.51
MSH2-206ENST00000543555 GLRX2Q9NS18 164 aa11.87□□□□□ -0.51
MSH2-206ENST00000543555 AMDHD2Q9Y303 409 aa11.87□□□□□ -0.51
MSH2-206ENST00000543555 C3orf85A0A1B0GTC6 90 aa11.87□□□□□ -0.51
MSH2-206ENST00000543555 TRDCB7Z8K6 153 aa11.87□□□□□ -0.51
MSH2-206ENST00000543555 J3QW42 95 aa11.87□□□□□ -0.51
MSH2-206ENST00000543555 KCNJ3P48549 501 aa11.87□□□□□ -0.51
MSH2-206ENST00000543555 IL13RA2Q14627 380 aa11.87□□□□□ -0.51
MSH2-206ENST00000543555 GTF3AQ92664 365 aaKnown RBP11.87□□□□□ -0.51
MSH2-206ENST00000543555 OR51I2Q9H344 312 aa11.87□□□□□ -0.51
MSH2-206ENST00000543555 FBXL17Q9UF56 701 aa11.87□□□□□ -0.51
MSH2-206ENST00000543555 ATP23Q9Y6H3 246 aa11.87□□□□□ -0.51
MSH2-206ENST00000543555 E5RGE8 158 aa11.86□□□□□ -0.51
MSH2-206ENST00000543555 CELA3BP08861 270 aa11.86□□□□□ -0.51
MSH2-206ENST00000543555 RCC1P18754 421 aaPredicted RBP11.86□□□□□ -0.51
MSH2-206ENST00000543555 IGHV1-2P23083 117 aa11.86□□□□□ -0.51
MSH2-206ENST00000543555 TGFBR3Q03167 851 aa11.86□□□□□ -0.51
MSH2-206ENST00000543555 EIF5AL1Q6IS14 154 aaKnown RBP11.86□□□□□ -0.51
MSH2-206ENST00000543555 FBXW12Q6X9E4 464 aa11.86□□□□□ -0.51
MSH2-206ENST00000543555 LDLRAD3Q86YD5 345 aa11.86□□□□□ -0.51
MSH2-206ENST00000543555 GCNT2Q8N0V5 402 aa11.86□□□□□ -0.51
MSH2-206ENST00000543555 FAM58AQ8N1B3 248 aa11.86□□□□□ -0.51
MSH2-206ENST00000543555 ARL11Q969Q4 196 aa11.86□□□□□ -0.51
MSH2-206ENST00000543555 RIMS4Q9H426 269 aaPredicted RBP11.86□□□□□ -0.51
MSH2-206ENST00000543555 LPAR3Q9UBY5 353 aa11.86□□□□□ -0.51
MSH2-206ENST00000543555 NSG2Q9Y328 171 aa11.86□□□□□ -0.51
MSH2-206ENST00000543555 TMED3Q9Y3Q3 217 aa11.86□□□□□ -0.51
MSH2-206ENST00000543555 SIGLEC5O15389 551 aa11.86□□□□□ -0.51
MSH2-206ENST00000543555 GAPDHP04406 335 aaKnown RBP11.86□□□□□ -0.51
MSH2-206ENST00000543555 CTXN2P0C2S0 81 aa11.86□□□□□ -0.51
MSH2-206ENST00000543555 TMEM33P57088 247 aa11.86□□□□□ -0.51
MSH2-206ENST00000543555 UBE2NP61088 152 aaKnown RBP11.86□□□□□ -0.51
MSH2-206ENST00000543555 MEX3BQ6ZN04 569 aaKnown RBP11.86□□□□□ -0.51
MSH2-206ENST00000543555 C17orf78Q8N4C9 275 aa11.86□□□□□ -0.51
MSH2-206ENST00000543555 SLC35G3Q8N808 338 aa11.86□□□□□ -0.51
MSH2-206ENST00000543555 OR52M1Q8NGK5 317 aa11.86□□□□□ -0.51
MSH2-206ENST00000543555 MRPL30Q8TCC3 161 aaKnown RBP11.86□□□□□ -0.51
MSH2-206ENST00000543555 SECTM1Q8WVN6 248 aa11.86□□□□□ -0.51
MSH2-206ENST00000543555 NARS2Q96I59 477 aaKnown RBP11.86□□□□□ -0.51
MSH2-206ENST00000543555 ZFP57Q9NU63 452 aa11.86□□□□□ -0.51
MSH2-206ENST00000543555 ATRXP46100 2492 aa11.86□□□□□ -0.51
MSH2-206ENST00000543555 ZNF705EA8MWA4 302 aaPredicted RBP11.86□□□□□ -0.51
MSH2-206ENST00000543555 SMPD2O60906 423 aa11.86□□□□□ -0.51
MSH2-206ENST00000543555 RHBDL1O75783 438 aa11.86□□□□□ -0.51
MSH2-206ENST00000543555 TUSC2O75896 110 aa11.86□□□□□ -0.51
MSH2-206ENST00000543555 MRPL49Q13405 166 aaKnown RBP11.86□□□□□ -0.51
MSH2-206ENST00000543555 IGFBP7Q16270 282 aa11.86□□□□□ -0.51
MSH2-206ENST00000543555 TMEM268Q5VZI3 342 aa11.86□□□□□ -0.51
MSH2-206ENST00000543555 ZNF565Q8N9K5 539 aa11.86□□□□□ -0.51
MSH2-206ENST00000543555 TRAV24A0A0B4J272 114 aa11.85□□□□□ -0.51
MSH2-206ENST00000543555 IGKV1-6A0A0C4DH72 117 aa11.85□□□□□ -0.51
MSH2-206ENST00000543555 A0A1W2PR80 420 aa11.85□□□□□ -0.51
MSH2-206ENST00000543555 J3QT63 122 aa11.85□□□□□ -0.51
MSH2-206ENST00000543555 HS3ST1O14792 307 aa11.85□□□□□ -0.51
MSH2-206ENST00000543555 EIF2S3P41091 472 aaKnown RBP11.85□□□□□ -0.51
MSH2-206ENST00000543555 IDH3GP51553 393 aaPredicted RBP11.85□□□□□ -0.51
MSH2-206ENST00000543555 RND3P61587 244 aa11.85□□□□□ -0.51
MSH2-206ENST00000543555 SRPXP78539 464 aa11.85□□□□□ -0.51
MSH2-206ENST00000543555 MST1LQ2TV78 715 aa11.85□□□□□ -0.51
MSH2-206ENST00000543555 IGFL2Q6UWQ7 119 aa11.85□□□□□ -0.51
MSH2-206ENST00000543555 FAM214BQ7L5A3 538 aa11.85□□□□□ -0.51
MSH2-206ENST00000543555 TBC1D26Q86UD7 250 aa11.85□□□□□ -0.51
MSH2-206ENST00000543555 TRIB1Q96RU8 372 aa11.85□□□□□ -0.51
MSH2-206ENST00000543555 TMEM222Q9H0R3 208 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms