RNA–Protein interactions for RNA: ENST00000543545.5

CPSF7-221, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 5

Gene CPSF7, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-221	ENST00000543545	ENSA	O43768	121 aa	Known RBP	8.41	□□□□□ -1.06
CPSF7-221	ENST00000543545	GLA	P06280	429 aa		8.41	□□□□□ -1.06
CPSF7-221	ENST00000543545	PPIAL4G	P0DN37	164 aa		8.41	□□□□□ -1.06
CPSF7-221	ENST00000543545	GNB3	P16520	340 aa		8.41	□□□□□ -1.06
CPSF7-221	ENST00000543545	TALDO1	P37837	337 aa		8.41	□□□□□ -1.06
CPSF7-221	ENST00000543545	GLIPR1	P48060	266 aa		8.41	□□□□□ -1.06
CPSF7-221	ENST00000543545	P2RX3	P56373	397 aa		8.41	□□□□□ -1.06
CPSF7-221	ENST00000543545	TMEM50B	P56557	158 aa		8.41	□□□□□ -1.06
CPSF7-221	ENST00000543545	ARFRP1	Q13795	201 aa		8.41	□□□□□ -1.06
CPSF7-221	ENST00000543545	ARL6IP1	Q15041	203 aa		8.41	□□□□□ -1.06
CPSF7-221	ENST00000543545	MOGAT2	Q3SYC2	334 aa		8.41	□□□□□ -1.06
CPSF7-221	ENST00000543545	CDNF	Q49AH0	187 aa		8.41	□□□□□ -1.06
CPSF7-221	ENST00000543545	FAHD2B	Q6P2I3	314 aa	Predicted RBP	8.41	□□□□□ -1.06
CPSF7-221	ENST00000543545	GLCCI1	Q86VQ1	547 aa		8.41	□□□□□ -1.06
CPSF7-221	ENST00000543545	IZUMO1	Q8IYV9	350 aa		8.41	□□□□□ -1.06
CPSF7-221	ENST00000543545	PLPPR1	Q8TBJ4	325 aa		8.41	□□□□□ -1.06
CPSF7-221	ENST00000543545	SETD6	Q8TBK2	473 aa		8.41	□□□□□ -1.06
CPSF7-221	ENST00000543545	CCDC107	Q8WV48	283 aa		8.41	□□□□□ -1.06
CPSF7-221	ENST00000543545	RAB40A	Q8WXH6	277 aa		8.41	□□□□□ -1.06
CPSF7-221	ENST00000543545	DYRK2	Q92630	601 aa		8.41	□□□□□ -1.06
CPSF7-221	ENST00000543545	TMEM186	Q96B77	213 aa		8.41	□□□□□ -1.06
CPSF7-221	ENST00000543545	MSI2	Q96DH6	328 aa	Known RBP	8.41	□□□□□ -1.06
CPSF7-221	ENST00000543545	SLC25A38	Q96DW6	304 aa		8.41	□□□□□ -1.06
CPSF7-221	ENST00000543545	FAHD2A	Q96GK7	314 aa		8.41	□□□□□ -1.06
CPSF7-221	ENST00000543545	SULT4A1	Q9BR01	284 aa		8.41	□□□□□ -1.06
CPSF7-221	ENST00000543545	NUDT16L1	Q9BRJ7	211 aa	Known RBP	8.41	□□□□□ -1.06
CPSF7-221	ENST00000543545	DCTN5	Q9BTE1	182 aa		8.41	□□□□□ -1.06
CPSF7-221	ENST00000543545	PECR	Q9BY49	303 aa		8.41	□□□□□ -1.06
CPSF7-221	ENST00000543545	SLIRP	Q9GZT3	109 aa	Known RBP	8.41	□□□□□ -1.06
CPSF7-221	ENST00000543545	MMP26	Q9NRE1	261 aa		8.41	□□□□□ -1.06
CPSF7-221	ENST00000543545	C19orf12	Q9NSK7	152 aa		8.41	□□□□□ -1.06
CPSF7-221	ENST00000543545	HIF1AN	Q9NWT6	349 aa		8.41	□□□□□ -1.06
CPSF7-221	ENST00000543545	RCC2	Q9P258	522 aa	Known RBP	8.41	□□□□□ -1.06
CPSF7-221	ENST00000543545	ONECUT1	Q9UBC0	465 aa		8.41	□□□□□ -1.06
CPSF7-221	ENST00000543545	KIF25	Q9UIL4	384 aa		8.41	□□□□□ -1.06
CPSF7-221	ENST00000543545	RPUSD1	Q9UJJ7	312 aa	Known RBP	8.41	□□□□□ -1.06
CPSF7-221	ENST00000543545	MRPS7	Q9Y2R9	242 aa	Known RBP	8.41	□□□□□ -1.06
CPSF7-221	ENST00000543545	CSMD2	Q7Z408	3487 aa		8.41	□□□□□ -1.06
CPSF7-221	ENST00000543545	CHD3	Q12873	2000 aa	Known RBP	8.41	□□□□□ -1.06
CPSF7-221	ENST00000543545	AKAP9	Q99996	3911 aa		8.4	□□□□□ -1.06
CPSF7-221	ENST00000543545	TRGV10	A0A0A0MS01	117 aa		8.4	□□□□□ -1.06
CPSF7-221	ENST00000543545	ODAM	A1E959	279 aa		8.4	□□□□□ -1.06
CPSF7-221	ENST00000543545	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	8.4	□□□□□ -1.06
CPSF7-221	ENST00000543545		A8MXK9	166 aa		8.4	□□□□□ -1.06
CPSF7-221	ENST00000543545	FCN3	O75636	299 aa		8.4	□□□□□ -1.06
CPSF7-221	ENST00000543545	APOA1	P02647	267 aa		8.4	□□□□□ -1.06
CPSF7-221	ENST00000543545	CSN2	P05814	226 aa		8.4	□□□□□ -1.06
CPSF7-221	ENST00000543545	EIF4E	P06730	217 aa	Known RBP	8.4	□□□□□ -1.06
CPSF7-221	ENST00000543545	LIPF	P07098	398 aa		8.4	□□□□□ -1.06
CPSF7-221	ENST00000543545	CD3G	P09693	182 aa		8.4	□□□□□ -1.06
CPSF7-221	ENST00000543545	HIST1H1D	P16402	221 aa	Known RBP	8.4	□□□□□ -1.06
CPSF7-221	ENST00000543545	ZNF16	P17020	682 aa	Predicted RBP	8.4	□□□□□ -1.06
CPSF7-221	ENST00000543545	ELK1	P19419	428 aa		8.4	□□□□□ -1.06
CPSF7-221	ENST00000543545	CDK2	P24941	298 aa		8.4	□□□□□ -1.06
CPSF7-221	ENST00000543545	ERP29	P30040	261 aa	Known RBP	8.4	□□□□□ -1.06
CPSF7-221	ENST00000543545	S100A5	P33763	92 aa		8.4	□□□□□ -1.06
CPSF7-221	ENST00000543545	MNDA	P41218	407 aa		8.4	□□□□□ -1.06
CPSF7-221	ENST00000543545	MADCAM1	Q13477	382 aa		8.4	□□□□□ -1.06
CPSF7-221	ENST00000543545	C11orf91	Q3C1V1	193 aa		8.4	□□□□□ -1.06
CPSF7-221	ENST00000543545	PLAC9	Q5JTB6	97 aa		8.4	□□□□□ -1.06
CPSF7-221	ENST00000543545	TMEM69	Q5SWH9	247 aa		8.4	□□□□□ -1.06
CPSF7-221	ENST00000543545	DCAF12L2	Q5VW00	463 aa		8.4	□□□□□ -1.06
CPSF7-221	ENST00000543545	TMEM200B	Q69YZ2	307 aa		8.4	□□□□□ -1.06
CPSF7-221	ENST00000543545	BIVM	Q86UB2	503 aa		8.4	□□□□□ -1.06
CPSF7-221	ENST00000543545	RTN4RL2	Q86UN3	420 aa		8.4	□□□□□ -1.06
CPSF7-221	ENST00000543545	ZNF565	Q8N9K5	539 aa		8.4	□□□□□ -1.06
CPSF7-221	ENST00000543545	OR4K15	Q8NH41	348 aa		8.4	□□□□□ -1.06
CPSF7-221	ENST00000543545	C1orf159	Q96HA4	380 aa		8.4	□□□□□ -1.06
CPSF7-221	ENST00000543545	CMTM3	Q96MX0	182 aa		8.4	□□□□□ -1.06
CPSF7-221	ENST00000543545	CMSS1	Q9BQ75	279 aa	Known RBP	8.4	□□□□□ -1.06
CPSF7-221	ENST00000543545	TMUB1	Q9BVT8	246 aa		8.4	□□□□□ -1.06
CPSF7-221	ENST00000543545	ABCG5	Q9H222	651 aa		8.4	□□□□□ -1.06
CPSF7-221	ENST00000543545	MMP27	Q9H306	513 aa		8.4	□□□□□ -1.06
CPSF7-221	ENST00000543545	YAE1D1	Q9NRH1	226 aa		8.4	□□□□□ -1.06
CPSF7-221	ENST00000543545	OR6C3	Q9NZP0	311 aa		8.4	□□□□□ -1.06
CPSF7-221	ENST00000543545	LPAR3	Q9UBY5	353 aa		8.4	□□□□□ -1.06
CPSF7-221	ENST00000543545	AK3	Q9UIJ7	227 aa		8.4	□□□□□ -1.06
CPSF7-221	ENST00000543545	TRAPPC2L	Q9UL33	140 aa		8.4	□□□□□ -1.06
CPSF7-221	ENST00000543545	HSF4	Q9ULV5	492 aa		8.4	□□□□□ -1.06
CPSF7-221	ENST00000543545	CSMD1	Q96PZ7	3565 aa		8.4	□□□□□ -1.06
CPSF7-221	ENST00000543545	SETX	Q7Z333	2677 aa	Known RBP	8.4	□□□□□ -1.07
CPSF7-221	ENST00000543545	MYO9A	B2RTY4	2548 aa		8.4	□□□□□ -1.07
CPSF7-221	ENST00000543545		A0A0A6YYH2	397 aa		8.39	□□□□□ -1.07
CPSF7-221	ENST00000543545	TRAV39	A0A0B4J263	110 aa		8.39	□□□□□ -1.07
CPSF7-221	ENST00000543545	IGHV2-70D	A0A0C4DH43	119 aa		8.39	□□□□□ -1.07
CPSF7-221	ENST00000543545		A0A0G2JMP0	313 aa		8.39	□□□□□ -1.07
CPSF7-221	ENST00000543545		A0A0X1KG70	313 aa		8.39	□□□□□ -1.07
CPSF7-221	ENST00000543545	KIR2DS1	A0A191URI9	304 aa		8.39	□□□□□ -1.07
CPSF7-221	ENST00000543545		A6NJ64	397 aa		8.39	□□□□□ -1.07
CPSF7-221	ENST00000543545	FOXI3	A8MTJ6	420 aa	Predicted RBP	8.39	□□□□□ -1.07
CPSF7-221	ENST00000543545	SERPINE3	A8MV23	424 aa		8.39	□□□□□ -1.07
CPSF7-221	ENST00000543545	XRCC3	O43542	346 aa		8.39	□□□□□ -1.07
CPSF7-221	ENST00000543545	CA11	O75493	328 aa		8.39	□□□□□ -1.07
CPSF7-221	ENST00000543545	MT-ND4	P03905	459 aa		8.39	□□□□□ -1.07
CPSF7-221	ENST00000543545	FOSL1	P15407	271 aa		8.39	□□□□□ -1.07
CPSF7-221	ENST00000543545	GLP1R	P43220	463 aa		8.39	□□□□□ -1.07
CPSF7-221	ENST00000543545	DVL1P1	P54792	670 aa	Predicted RBP	8.39	□□□□□ -1.07
CPSF7-221	ENST00000543545	GNG2	P59768	71 aa		8.39	□□□□□ -1.07
CPSF7-221	ENST00000543545	ARF6	P62330	175 aa		8.39	□□□□□ -1.07
CPSF7-221	ENST00000543545	MEF2C	Q06413	473 aa	Predicted RBP	8.39	□□□□□ -1.07

Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms