RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 ABHD12Q8N2K0 398 aa10.53□□□□□ -0.72
TNFRSF1A-215ENST00000543359 OR10K1Q8NGX5 313 aa10.53□□□□□ -0.72
TNFRSF1A-215ENST00000543359 GAL3ST2Q9H3Q3 398 aa10.53□□□□□ -0.72
TNFRSF1A-215ENST00000543359 ZNF286AQ9HBT8 521 aa10.53□□□□□ -0.72
TNFRSF1A-215ENST00000543359 PCDHGB5Q9Y5G0 923 aa10.53□□□□□ -0.72
TNFRSF1A-215ENST00000543359 TRBV5-7A0A0A0MS05 114 aa10.52□□□□□ -0.73
TNFRSF1A-215ENST00000543359 MAGEA13PA6NCF6 341 aa10.52□□□□□ -0.73
TNFRSF1A-215ENST00000543359 H0YJX3 145 aa10.52□□□□□ -0.73
TNFRSF1A-215ENST00000543359 CDRT1O95170 752 aa10.52□□□□□ -0.73
TNFRSF1A-215ENST00000543359 CD2P06729 351 aa10.52□□□□□ -0.73
TNFRSF1A-215ENST00000543359 MYL12AP19105 171 aa10.52□□□□□ -0.73
TNFRSF1A-215ENST00000543359 HTR1DP28221 377 aa10.52□□□□□ -0.73
TNFRSF1A-215ENST00000543359 CAPGP40121 348 aa10.52□□□□□ -0.73
TNFRSF1A-215ENST00000543359 OR3A4PP47883 348 aa10.52□□□□□ -0.73
TNFRSF1A-215ENST00000543359 BLCAPP62952 87 aa10.52□□□□□ -0.73
TNFRSF1A-215ENST00000543359 SLC34A1Q06495 639 aa10.52□□□□□ -0.73
TNFRSF1A-215ENST00000543359 HABP2Q14520 560 aaPredicted RBP10.52□□□□□ -0.73
TNFRSF1A-215ENST00000543359 PIGYQ3MUY2 71 aa10.52□□□□□ -0.73
TNFRSF1A-215ENST00000543359 NHLRC3Q5JS37 347 aa10.52□□□□□ -0.73
TNFRSF1A-215ENST00000543359 RSBN1Q5VWQ0 802 aaPredicted RBP10.52□□□□□ -0.73
TNFRSF1A-215ENST00000543359 OR52W1Q6IF63 320 aa10.52□□□□□ -0.73
TNFRSF1A-215ENST00000543359 RTN4RL2Q86UN3 420 aa10.52□□□□□ -0.73
TNFRSF1A-215ENST00000543359 KLHDC1Q8N7A1 406 aa10.52□□□□□ -0.73
TNFRSF1A-215ENST00000543359 ZFP41Q8N8Y5 198 aa10.52□□□□□ -0.73
TNFRSF1A-215ENST00000543359 SETD9Q8NE22 299 aa10.52□□□□□ -0.73
TNFRSF1A-215ENST00000543359 OR13A1Q8NGR1 328 aa10.52□□□□□ -0.73
TNFRSF1A-215ENST00000543359 OR2T6Q8NHC8 308 aa10.52□□□□□ -0.73
TNFRSF1A-215ENST00000543359 PLPPR1Q8TBJ4 325 aa10.52□□□□□ -0.73
TNFRSF1A-215ENST00000543359 CPNE2Q96FN4 548 aaPredicted RBP10.52□□□□□ -0.73
TNFRSF1A-215ENST00000543359 NR1H4Q96RI1 486 aaPredicted RBP10.52□□□□□ -0.73
TNFRSF1A-215ENST00000543359 IFT22Q9H7X7 185 aa10.52□□□□□ -0.73
TNFRSF1A-215ENST00000543359 TMEM138Q9NPI0 162 aa10.52□□□□□ -0.73
TNFRSF1A-215ENST00000543359 ABCB10Q9NRK6 738 aa10.52□□□□□ -0.73
TNFRSF1A-215ENST00000543359 PLCXD1Q9NUJ7 323 aa10.52□□□□□ -0.73
TNFRSF1A-215ENST00000543359 FKBP14Q9NWM8 211 aa10.52□□□□□ -0.73
TNFRSF1A-215ENST00000543359 IL36GQ9NZH8 169 aa10.52□□□□□ -0.73
TNFRSF1A-215ENST00000543359 DPM3Q9P2X0 92 aa10.52□□□□□ -0.73
TNFRSF1A-215ENST00000543359 PSORS1C1Q9UIG5 152 aa10.52□□□□□ -0.73
TNFRSF1A-215ENST00000543359 TRAV8-7A0A075B6U6 113 aa10.51□□□□□ -0.73
TNFRSF1A-215ENST00000543359 KBTBD11-OT1A0A1B0GTJ5 212 aa10.51□□□□□ -0.73
TNFRSF1A-215ENST00000543359 FAM172BPA6NC97 362 aa10.51□□□□□ -0.73
TNFRSF1A-215ENST00000543359 ZNF729A6NN14 1252 aaPredicted RBP10.51□□□□□ -0.73
TNFRSF1A-215ENST00000543359 NPIPB11E5RHQ5 1161 aa10.51□□□□□ -0.73
TNFRSF1A-215ENST00000543359 ANKRD65E5RJM6 399 aa10.51□□□□□ -0.73
TNFRSF1A-215ENST00000543359 MAGEB3O15480 346 aa10.51□□□□□ -0.73
TNFRSF1A-215ENST00000543359 XPNPEP2O43895 674 aa10.51□□□□□ -0.73
TNFRSF1A-215ENST00000543359 C21orf33P30042 268 aaPredicted RBP10.51□□□□□ -0.73
TNFRSF1A-215ENST00000543359 BDKRB2P30411 391 aa10.51□□□□□ -0.73
TNFRSF1A-215ENST00000543359 ZNF93P35789 620 aaPredicted RBP10.51□□□□□ -0.73
TNFRSF1A-215ENST00000543359 RSU1Q15404 277 aa10.51□□□□□ -0.73
TNFRSF1A-215ENST00000543359 Q499Y3 187 aa10.51□□□□□ -0.73
TNFRSF1A-215ENST00000543359 YIF1BQ5BJH7 314 aa10.51□□□□□ -0.73
TNFRSF1A-215ENST00000543359 LYPD6Q86Y78 171 aa10.51□□□□□ -0.73
TNFRSF1A-215ENST00000543359 NDNFQ8TB73 568 aa10.51□□□□□ -0.73
TNFRSF1A-215ENST00000543359 TFAP2CQ92754 450 aa10.51□□□□□ -0.73
TNFRSF1A-215ENST00000543359 KIRREL1Q96J84 757 aa10.51□□□□□ -0.73
TNFRSF1A-215ENST00000543359 GPER1Q99527 375 aa10.51□□□□□ -0.73
TNFRSF1A-215ENST00000543359 WNT10AQ9GZT5 417 aa10.51□□□□□ -0.73
TNFRSF1A-215ENST00000543359 ING3Q9NXR8 418 aa10.51□□□□□ -0.73
TNFRSF1A-215ENST00000543359 CNOT2Q9NZN8 540 aaKnown RBP10.51□□□□□ -0.73
TNFRSF1A-215ENST00000543359 OR6C3Q9NZP0 311 aa10.51□□□□□ -0.73
TNFRSF1A-215ENST00000543359 KIF25Q9UIL4 384 aa10.51□□□□□ -0.73
TNFRSF1A-215ENST00000543359 PITPNC1Q9UKF7 332 aa10.51□□□□□ -0.73
TNFRSF1A-215ENST00000543359 EFCAB10A6NFE3 127 aa10.5□□□□□ -0.73
TNFRSF1A-215ENST00000543359 BUB1B-PAK6H3BSN5 160 aa10.5□□□□□ -0.73
TNFRSF1A-215ENST00000543359 HSPB6O14558 160 aa10.5□□□□□ -0.73
TNFRSF1A-215ENST00000543359 PIN1P1O15428 100 aa10.5□□□□□ -0.73
TNFRSF1A-215ENST00000543359 HTR3BO95264 441 aa10.5□□□□□ -0.73
TNFRSF1A-215ENST00000543359 DEFA6Q01524 100 aa10.5□□□□□ -0.73
TNFRSF1A-215ENST00000543359 C2orf68Q2NKX9 166 aa10.5□□□□□ -0.73
TNFRSF1A-215ENST00000543359 HLA-DRB5Q30154 266 aa10.5□□□□□ -0.73
TNFRSF1A-215ENST00000543359 PAN3Q58A45 887 aaKnown RBP10.5□□□□□ -0.73
TNFRSF1A-215ENST00000543359 DDI2Q5TDH0 399 aa10.5□□□□□ -0.73
TNFRSF1A-215ENST00000543359 C11orf44Q8N8P7 122 aa10.5□□□□□ -0.73
TNFRSF1A-215ENST00000543359 SUMF2Q8NBJ7 301 aa10.5□□□□□ -0.73
TNFRSF1A-215ENST00000543359 FAM110DQ8TAY7 271 aaPredicted RBP10.5□□□□□ -0.73
TNFRSF1A-215ENST00000543359 ZNF596Q8TC21 504 aa10.5□□□□□ -0.73
TNFRSF1A-215ENST00000543359 OCSTAMPQ9BR26 566 aa10.5□□□□□ -0.73
TNFRSF1A-215ENST00000543359 NKX1-2Q9UD57 310 aaPredicted RBP10.5□□□□□ -0.73
TNFRSF1A-215ENST00000543359 MEIKINA0A087WXM9 373 aa10.49□□□□□ -0.73
TNFRSF1A-215ENST00000543359 A0A1W2PP11 408 aa10.49□□□□□ -0.73
TNFRSF1A-215ENST00000543359 LEUTXA8MZ59 168 aa10.49□□□□□ -0.73
TNFRSF1A-215ENST00000543359 F2RL2O00254 374 aa10.49□□□□□ -0.73
TNFRSF1A-215ENST00000543359 GEMIN2O14893 280 aaKnown RBP10.49□□□□□ -0.73
TNFRSF1A-215ENST00000543359 CD1AP06126 327 aa10.49□□□□□ -0.73
TNFRSF1A-215ENST00000543359 VSIG10L2P0DP72 767 aa10.49□□□□□ -0.73
TNFRSF1A-215ENST00000543359 CD24P25063 80 aa10.49□□□□□ -0.73
TNFRSF1A-215ENST00000543359 KCNJ3P48549 501 aa10.49□□□□□ -0.73
TNFRSF1A-215ENST00000543359 RBM11P57052 281 aaKnown RBP10.49□□□□□ -0.73
TNFRSF1A-215ENST00000543359 PPP3R1P63098 170 aa10.49□□□□□ -0.73
TNFRSF1A-215ENST00000543359 RIPK1Q13546 671 aa10.49□□□□□ -0.73
TNFRSF1A-215ENST00000543359 Q6ZTK2 550 aa10.49□□□□□ -0.73
TNFRSF1A-215ENST00000543359 C8orf59Q8N0T1 100 aaPredicted RBP10.49□□□□□ -0.73
TNFRSF1A-215ENST00000543359 OSR2Q8N2R0 312 aa10.49□□□□□ -0.73
TNFRSF1A-215ENST00000543359 NANOGP1Q8N7R0 232 aa10.49□□□□□ -0.73
TNFRSF1A-215ENST00000543359 DTX3Q8N9I9 347 aa10.49□□□□□ -0.73
TNFRSF1A-215ENST00000543359 ZNF565Q8N9K5 539 aa10.49□□□□□ -0.73
TNFRSF1A-215ENST00000543359 OR4D6Q8NGJ1 314 aa10.49□□□□□ -0.73
TNFRSF1A-215ENST00000543359 ZNF184Q99676 751 aaPredicted RBP10.49□□□□□ -0.73
TNFRSF1A-215ENST00000543359 DPCDQ9BVM2 203 aaPredicted RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms