RNA–Protein interactions for RNA: ENST00000543354.5

RPS6KC1-206, Transcript of ribosomal protein S6 kinase C1, humanhuman

TSL 1 (best) BASIC

Gene RPS6KC1, Length 4,082 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS6KC1-206ENST00000543354 VDAC1P21796 283 aa12.14□□□□□ -0.47
RPS6KC1-206ENST00000543354 KIR2DL1P43626 348 aaPredicted RBP12.14□□□□□ -0.47
RPS6KC1-206ENST00000543354 SULT1A2P50226 295 aa12.14□□□□□ -0.47
RPS6KC1-206ENST00000543354 CCL7P80098 99 aa12.14□□□□□ -0.47
RPS6KC1-206ENST00000543354 MRGPRFQ96AM1 343 aa12.14□□□□□ -0.47
RPS6KC1-206ENST00000543354 ZNF385AQ96PM9 386 aaKnown RBP12.14□□□□□ -0.47
RPS6KC1-206ENST00000543354 FAM173AQ9BQD7 235 aa12.14□□□□□ -0.47
RPS6KC1-206ENST00000543354 KLF4O43474 513 aa12.13□□□□□ -0.47
RPS6KC1-206ENST00000543354 DTYMKP23919 212 aa12.13□□□□□ -0.47
RPS6KC1-206ENST00000543354 HLA-BQ31612 363 aa12.13□□□□□ -0.47
RPS6KC1-206ENST00000543354 OR2T10Q8NGZ9 312 aa12.13□□□□□ -0.47
RPS6KC1-206ENST00000543354 IFI44Q8TCB0 444 aa12.13□□□□□ -0.47
RPS6KC1-206ENST00000543354 WFIKKN1Q96NZ8 548 aa12.13□□□□□ -0.47
RPS6KC1-206ENST00000543354 RARRES2Q99969 163 aa12.13□□□□□ -0.47
RPS6KC1-206ENST00000543354 RSG1Q9BU20 258 aa12.13□□□□□ -0.47
RPS6KC1-206ENST00000543354 C5orf66Q9H5L9 145 aa12.13□□□□□ -0.47
RPS6KC1-206ENST00000543354 PLA2G3Q9NZ20 509 aa12.13□□□□□ -0.47
RPS6KC1-206ENST00000543354 PRSS50Q9UI38 385 aa12.13□□□□□ -0.47
RPS6KC1-206ENST00000543354 TRAF3IP2O43734 574 aaPredicted RBP12.13□□□□□ -0.47
RPS6KC1-206ENST00000543354 CRYAAP02489 173 aa12.13□□□□□ -0.47
RPS6KC1-206ENST00000543354 ZNF25P17030 456 aaPredicted RBP12.13□□□□□ -0.47
RPS6KC1-206ENST00000543354 NAAAQ02083 359 aa12.13□□□□□ -0.47
RPS6KC1-206ENST00000543354 IZUMO4Q1ZYL8 232 aa12.13□□□□□ -0.47
RPS6KC1-206ENST00000543354 WDR25Q64LD2 544 aaPredicted RBP12.13□□□□□ -0.47
RPS6KC1-206ENST00000543354 OR10G4Q8NGN3 311 aa12.13□□□□□ -0.47
RPS6KC1-206ENST00000543354 OR10G9Q8NGN4 311 aa12.13□□□□□ -0.47
RPS6KC1-206ENST00000543354 OR10G7Q8NGN6 311 aa12.13□□□□□ -0.47
RPS6KC1-206ENST00000543354 GALMQ96C23 342 aa12.13□□□□□ -0.47
RPS6KC1-206ENST00000543354 ATP5SQ99766 215 aa12.13□□□□□ -0.47
RPS6KC1-206ENST00000543354 IGKV1D-42A0A075B6H8 117 aa12.13□□□□□ -0.47
RPS6KC1-206ENST00000543354 C2CD4DB7Z1M9 353 aa12.13□□□□□ -0.47
RPS6KC1-206ENST00000543354 FCN1O00602 326 aa12.13□□□□□ -0.47
RPS6KC1-206ENST00000543354 SYNGR2O43760 224 aa12.13□□□□□ -0.47
RPS6KC1-206ENST00000543354 ACAA1P09110 424 aaPredicted RBP12.13□□□□□ -0.47
RPS6KC1-206ENST00000543354 UBE2G1P62253 170 aa12.13□□□□□ -0.47
RPS6KC1-206ENST00000543354 CXorf66Q5JRM2 361 aaPredicted RBP12.13□□□□□ -0.47
RPS6KC1-206ENST00000543354 SLC36A1Q7Z2H8 476 aa12.13□□□□□ -0.47
RPS6KC1-206ENST00000543354 HOGA1Q86XE5 327 aa12.13□□□□□ -0.47
RPS6KC1-206ENST00000543354 RAB40CQ96S21 281 aa12.13□□□□□ -0.47
RPS6KC1-206ENST00000543354 SH3BGRL3Q9H299 93 aa12.13□□□□□ -0.47
RPS6KC1-206ENST00000543354 DOK5Q9P104 306 aa12.13□□□□□ -0.47
RPS6KC1-206ENST00000543354 B3GAT1Q9P2W7 334 aa12.13□□□□□ -0.47
RPS6KC1-206ENST00000543354 FZR1Q9UM11 496 aa12.13□□□□□ -0.47
RPS6KC1-206ENST00000543354 PAM16Q9Y3D7 125 aa12.13□□□□□ -0.47
RPS6KC1-206ENST00000543354 NGFP01138 241 aa12.12□□□□□ -0.47
RPS6KC1-206ENST00000543354 SEC11BP0C7V7 166 aa12.12□□□□□ -0.47
RPS6KC1-206ENST00000543354 CCL11P51671 97 aa12.12□□□□□ -0.47
RPS6KC1-206ENST00000543354 RAB35Q15286 201 aa12.12□□□□□ -0.47
RPS6KC1-206ENST00000543354 HES3Q5TGS1 186 aa12.12□□□□□ -0.47
RPS6KC1-206ENST00000543354 ZNF343Q6P1L6 599 aa12.12□□□□□ -0.47
RPS6KC1-206ENST00000543354 OR10A7Q8NGE5 316 aa12.12□□□□□ -0.47
RPS6KC1-206ENST00000543354 TMEM204Q9BSN7 226 aa12.12□□□□□ -0.47
RPS6KC1-206ENST00000543354 ZNF665Q9H7R5 613 aa12.12□□□□□ -0.47
RPS6KC1-206ENST00000543354 FSCN3Q9NQT6 498 aa12.12□□□□□ -0.47
RPS6KC1-206ENST00000543354 TANC1Q9C0D5 1861 aa12.12□□□□□ -0.47
RPS6KC1-206ENST00000543354 LINC00587B1AMM8 73 aa12.12□□□□□ -0.47
RPS6KC1-206ENST00000543354 SNRPCP09234 159 aaKnown RBP12.12□□□□□ -0.47
RPS6KC1-206ENST00000543354 P2RY1P47900 373 aa12.12□□□□□ -0.47
RPS6KC1-206ENST00000543354 AMTP48728 403 aa12.12□□□□□ -0.47
RPS6KC1-206ENST00000543354 HNRNPA3P51991 378 aaKnown RBP12.12□□□□□ -0.47
RPS6KC1-206ENST00000543354 COL19A1Q14993 1142 aa12.12□□□□□ -0.47
RPS6KC1-206ENST00000543354 ANKRD37Q7Z713 158 aa12.12□□□□□ -0.47
RPS6KC1-206ENST00000543354 OR2V1Q8NHB1 315 aa12.12□□□□□ -0.47
RPS6KC1-206ENST00000543354 RASL10BQ96S79 203 aa12.12□□□□□ -0.47
RPS6KC1-206ENST00000543354 SOSTQ9BQB4 213 aa12.12□□□□□ -0.47
RPS6KC1-206ENST00000543354 LOC101059948A0A1B0GTJ6 334 aa12.12□□□□□ -0.47
RPS6KC1-206ENST00000543354 M0R1X1 148 aa12.12□□□□□ -0.47
RPS6KC1-206ENST00000543354 OR6X1Q8NH79 312 aa12.12□□□□□ -0.47
RPS6KC1-206ENST00000543354 HIST1H2BAQ96A08 127 aa12.12□□□□□ -0.47
RPS6KC1-206ENST00000543354 ACY3Q96HD9 319 aa12.12□□□□□ -0.47
RPS6KC1-206ENST00000543354 SSUH2Q9Y2M2 353 aa12.12□□□□□ -0.47
RPS6KC1-206ENST00000543354 SIP14410 1827 aa12.12□□□□□ -0.47
RPS6KC1-206ENST00000543354 TRBV5-7A0A0A0MS05 114 aa12.11□□□□□ -0.47
RPS6KC1-206ENST00000543354 DNASE2O00115 360 aaPredicted RBP12.11□□□□□ -0.47
RPS6KC1-206ENST00000543354 FCGR3BO75015 233 aa12.11□□□□□ -0.47
RPS6KC1-206ENST00000543354 MBPP02686 304 aaPredicted RBP12.11□□□□□ -0.47
RPS6KC1-206ENST00000543354 HYAL1Q12794 435 aa12.11□□□□□ -0.47
RPS6KC1-206ENST00000543354 SURF2Q15527 256 aaPredicted RBP12.11□□□□□ -0.47
RPS6KC1-206ENST00000543354 PTCRAQ6ISU1 281 aaPredicted RBP12.11□□□□□ -0.47
RPS6KC1-206ENST00000543354 PSG11Q9UQ72 335 aa12.11□□□□□ -0.47
RPS6KC1-206ENST00000543354 ZNF646O15015 1829 aaPredicted RBP12.11□□□□□ -0.47
RPS6KC1-206ENST00000543354 A0A1W2PQF6 199 aa12.11□□□□□ -0.47
RPS6KC1-206ENST00000543354 TNFSF4P23510 183 aa12.11□□□□□ -0.47
RPS6KC1-206ENST00000543354 DSCR4P56555 118 aaPredicted RBP12.11□□□□□ -0.47
RPS6KC1-206ENST00000543354 GNG3P63215 75 aa12.11□□□□□ -0.47
RPS6KC1-206ENST00000543354 CMTM2Q8TAZ6 248 aa12.11□□□□□ -0.47
RPS6KC1-206ENST00000543354 HEXA-AS1Q9H8Q6 139 aa12.11□□□□□ -0.47
RPS6KC1-206ENST00000543354 GYPAP02724 150 aa12.11□□□□□ -0.47
RPS6KC1-206ENST00000543354 OR3A1P47881 315 aa12.11□□□□□ -0.47
RPS6KC1-206ENST00000543354 Q3ZCU0 254 aa12.11□□□□□ -0.47
RPS6KC1-206ENST00000543354 BTNL3Q6UXE8 466 aa12.11□□□□□ -0.47
RPS6KC1-206ENST00000543354 SHISA5Q8N114 240 aa12.11□□□□□ -0.47
RPS6KC1-206ENST00000543354 OR10D3Q8NH80 312 aa12.11□□□□□ -0.47
RPS6KC1-206ENST00000543354 APOBEC3DQ96AK3 386 aaPredicted RBP12.11□□□□□ -0.47
RPS6KC1-206ENST00000543354 TM4SF19Q96DZ7 209 aa12.11□□□□□ -0.47
RPS6KC1-206ENST00000543354 ZNF488Q96MN9 340 aa12.11□□□□□ -0.47
RPS6KC1-206ENST00000543354 TTC28Q96AY4 2481 aa12.11□□□□□ -0.47
RPS6KC1-206ENST00000543354 CYB5R2Q6BCY4 276 aa12.11□□□□□ -0.47
RPS6KC1-206ENST00000543354 DPPA3Q6W0C5 159 aa12.11□□□□□ -0.47
RPS6KC1-206ENST00000543354 TIPARPQ7Z3E1 657 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms