RNA–Protein interactions for RNA: ENST00000542845.3

LIMS1-214, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-214ENST00000542845 C16orf45Q96MC5 204 aaPredicted RBP3.64□□□□□ -1.83
LIMS1-214ENST00000542845 NEU1Q99519 415 aa3.64□□□□□ -1.83
LIMS1-214ENST00000542845 HSPB9Q9BQS6 159 aa3.64□□□□□ -1.83
LIMS1-214ENST00000542845 ABCG5Q9H222 651 aa3.64□□□□□ -1.83
LIMS1-214ENST00000542845 OR51J1Q9H342 316 aa3.64□□□□□ -1.83
LIMS1-214ENST00000542845 GAL3ST2Q9H3Q3 398 aa3.64□□□□□ -1.83
LIMS1-214ENST00000542845 PLEKHA2Q9HB19 425 aa3.64□□□□□ -1.83
LIMS1-214ENST00000542845 THAP1Q9NVV9 213 aa3.64□□□□□ -1.83
LIMS1-214ENST00000542845 LGALS13Q9UHV8 139 aa3.64□□□□□ -1.83
LIMS1-214ENST00000542845 UBE2J1Q9Y385 318 aaPredicted RBP3.64□□□□□ -1.83
LIMS1-214ENST00000542845 GMEB1Q9Y692 573 aa3.64□□□□□ -1.83
LIMS1-214ENST00000542845 COMMD3-BMI1R4GMX3 469 aa3.64□□□□□ -1.83
LIMS1-214ENST00000542845 TRGV10A0A0A0MS01 117 aa3.63□□□□□ -1.83
LIMS1-214ENST00000542845 A0A1B0GVY2 172 aa3.63□□□□□ -1.83
LIMS1-214ENST00000542845 A0A1W2PPE3 182 aa3.63□□□□□ -1.83
LIMS1-214ENST00000542845 FAM230AA0A1W2PPH8 454 aa3.63□□□□□ -1.83
LIMS1-214ENST00000542845 A6NIN4 97 aa3.63□□□□□ -1.83
LIMS1-214ENST00000542845 OOSP1A8MZH6 123 aa3.63□□□□□ -1.83
LIMS1-214ENST00000542845 H0Y980 276 aa3.63□□□□□ -1.83
LIMS1-214ENST00000542845 SIRPB1O00241 398 aa3.63□□□□□ -1.83
LIMS1-214ENST00000542845 MPZL2O60487 215 aa3.63□□□□□ -1.83
LIMS1-214ENST00000542845 ZNF737O75373 536 aa3.63□□□□□ -1.83
LIMS1-214ENST00000542845 TPPPO94811 219 aa3.63□□□□□ -1.83
LIMS1-214ENST00000542845 NRASP01111 189 aa3.63□□□□□ -1.83
LIMS1-214ENST00000542845 IGLV1-51P01701 117 aa3.63□□□□□ -1.83
LIMS1-214ENST00000542845 SLC2A2P11168 524 aaPredicted RBP3.63□□□□□ -1.83
LIMS1-214ENST00000542845 H2AFXP16104 143 aaPredicted RBP3.63□□□□□ -1.83
LIMS1-214ENST00000542845 KDELR2P33947 212 aa3.63□□□□□ -1.83
LIMS1-214ENST00000542845 SOX6P35712 828 aa3.63□□□□□ -1.83
LIMS1-214ENST00000542845 PCP4P48539 62 aa3.63□□□□□ -1.83
LIMS1-214ENST00000542845 GNG10P50151 68 aa3.63□□□□□ -1.83
LIMS1-214ENST00000542845 GZMMP51124 257 aa3.63□□□□□ -1.83
LIMS1-214ENST00000542845 CD81P60033 236 aa3.63□□□□□ -1.83
LIMS1-214ENST00000542845 RUNX1Q01196 453 aa3.63□□□□□ -1.83
LIMS1-214ENST00000542845 SCN1BQ07699 218 aa3.63□□□□□ -1.83
LIMS1-214ENST00000542845 AESQ08117 197 aa3.63□□□□□ -1.83
LIMS1-214ENST00000542845 KIAA0141Q14154 515 aaPredicted RBP3.63□□□□□ -1.83
LIMS1-214ENST00000542845 RBMY1FQ15415 496 aaKnown RBP3.63□□□□□ -1.83
LIMS1-214ENST00000542845 SLX4IPQ5VYV7 408 aa3.63□□□□□ -1.83
LIMS1-214ENST00000542845 EPGNQ6UW88 154 aa3.63□□□□□ -1.83
LIMS1-214ENST00000542845 LINC00336Q6ZUF6 198 aa3.63□□□□□ -1.83
LIMS1-214ENST00000542845 CYP4Z1Q86W10 505 aa3.63□□□□□ -1.83
LIMS1-214ENST00000542845 ZNF575Q86XF7 245 aa3.63□□□□□ -1.83
LIMS1-214ENST00000542845 ZNF573Q86YE8 665 aa3.63□□□□□ -1.83
LIMS1-214ENST00000542845 TGIF2LXQ8IUE1 241 aa3.63□□□□□ -1.83
LIMS1-214ENST00000542845 ERI1Q8IV48 349 aaKnown RBP3.63□□□□□ -1.83
LIMS1-214ENST00000542845 Q8N9W7 124 aa3.63□□□□□ -1.83
LIMS1-214ENST00000542845 OR6K6Q8NGW6 343 aa3.63□□□□□ -1.83
LIMS1-214ENST00000542845 OR6N2Q8NGY6 317 aa3.63□□□□□ -1.83
LIMS1-214ENST00000542845 OR2T4Q8NH00 348 aa3.63□□□□□ -1.83
LIMS1-214ENST00000542845 OR52J3Q8NH60 311 aa3.63□□□□□ -1.83
LIMS1-214ENST00000542845 THEM6Q8WUY1 208 aa3.63□□□□□ -1.83
LIMS1-214ENST00000542845 OTULINQ96BN8 352 aa3.63□□□□□ -1.83
LIMS1-214ENST00000542845 RNF183Q96D59 192 aa3.63□□□□□ -1.83
LIMS1-214ENST00000542845 GPX7Q96SL4 187 aaPredicted RBP3.63□□□□□ -1.83
LIMS1-214ENST00000542845 ABHD6Q9BV23 337 aa3.63□□□□□ -1.83
LIMS1-214ENST00000542845 OR52D1Q9H346 318 aa3.63□□□□□ -1.83
LIMS1-214ENST00000542845 RGCCQ9H4X1 137 aa3.63□□□□□ -1.83
LIMS1-214ENST00000542845 NIPAL2Q9H841 368 aa3.63□□□□□ -1.83
LIMS1-214ENST00000542845 SRD5A3Q9H8P0 318 aa3.63□□□□□ -1.83
LIMS1-214ENST00000542845 VIPAS39Q9H9C1 493 aa3.63□□□□□ -1.83
LIMS1-214ENST00000542845 GPR173Q9NS66 373 aa3.63□□□□□ -1.83
LIMS1-214ENST00000542845 CHCHD3Q9NX63 227 aaKnown RBP3.63□□□□□ -1.83
LIMS1-214ENST00000542845 NDE1Q9NXR1 346 aa3.63□□□□□ -1.83
LIMS1-214ENST00000542845 TAS2R1Q9NYW7 299 aa3.63□□□□□ -1.83
LIMS1-214ENST00000542845 OR6C3Q9NZP0 311 aa3.63□□□□□ -1.83
LIMS1-214ENST00000542845 GLS2Q9UI32 602 aa3.63□□□□□ -1.83
LIMS1-214ENST00000542845 SLC7A11Q9UPY5 501 aa3.63□□□□□ -1.83
LIMS1-214ENST00000542845 PIGLQ9Y2B2 252 aa3.63□□□□□ -1.83
LIMS1-214ENST00000542845 POLDIP2Q9Y2S7 368 aa3.63□□□□□ -1.83
LIMS1-214ENST00000542845 AMMECR1Q9Y4X0 333 aaPredicted RBP3.63□□□□□ -1.83
LIMS1-214ENST00000542845 A0A1W2PPI3 338 aa3.62□□□□□ -1.83
LIMS1-214ENST00000542845 IZUMO1RA6ND01 250 aa3.62□□□□□ -1.83
LIMS1-214ENST00000542845 OR5B21A6NL26 309 aa3.62□□□□□ -1.83
LIMS1-214ENST00000542845 DIRC3C9JPN6 131 aa3.62□□□□□ -1.83
LIMS1-214ENST00000542845 F8VVB4 439 aa3.62□□□□□ -1.83
LIMS1-214ENST00000542845 F8VWA3 439 aa3.62□□□□□ -1.83
LIMS1-214ENST00000542845 J3QR06 171 aa3.62□□□□□ -1.83
LIMS1-214ENST00000542845 J3QT63 122 aa3.62□□□□□ -1.83
LIMS1-214ENST00000542845 RGS16O15492 202 aaPredicted RBP3.62□□□□□ -1.83
LIMS1-214ENST00000542845 SNNO75324 88 aaPredicted RBP3.62□□□□□ -1.83
LIMS1-214ENST00000542845 RGS11O94810 467 aa3.62□□□□□ -1.83
LIMS1-214ENST00000542845 HAND1O96004 215 aa3.62□□□□□ -1.83
LIMS1-214ENST00000542845 OR5H8P0DN80 308 aa3.62□□□□□ -1.83
LIMS1-214ENST00000542845 CLUP10909 449 aa3.62□□□□□ -1.83
LIMS1-214ENST00000542845 OMPP47874 163 aa3.62□□□□□ -1.83
LIMS1-214ENST00000542845 GLIPR1P48060 266 aa3.62□□□□□ -1.83
LIMS1-214ENST00000542845 RAB7AP51149 207 aa3.62□□□□□ -1.83
LIMS1-214ENST00000542845 SUMO2P61956 95 aaKnown RBP3.62□□□□□ -1.83
LIMS1-214ENST00000542845 CFHR3Q02985 330 aa3.62□□□□□ -1.83
LIMS1-214ENST00000542845 RIPPLY1Q0D2K3 151 aa3.62□□□□□ -1.83
LIMS1-214ENST00000542845 BNIP1Q12981 228 aa3.62□□□□□ -1.83
LIMS1-214ENST00000542845 MADCAM1Q13477 382 aa3.62□□□□□ -1.83
LIMS1-214ENST00000542845 DYRK1AQ13627 763 aa3.62□□□□□ -1.83
LIMS1-214ENST00000542845 TBCEQ15813 527 aaPredicted RBP3.62□□□□□ -1.83
LIMS1-214ENST00000542845 HEPN1Q6WQI6 88 aa3.62□□□□□ -1.83
LIMS1-214ENST00000542845 PRSS45Q7RTY3 260 aa3.62□□□□□ -1.83
LIMS1-214ENST00000542845 PGAM4Q8N0Y7 254 aa3.62□□□□□ -1.83
LIMS1-214ENST00000542845 EIF1ADQ8N9N8 165 aaKnown RBP3.62□□□□□ -1.83
LIMS1-214ENST00000542845 OR8B12Q8NGG6 310 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms