RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 SHEQ5VZ18 495 aa12.01□□□□□ -0.49
LDB3-207ENST00000542786 GGNBP1Q5YKI7 109 aa12.01□□□□□ -0.49
LDB3-207ENST00000542786 RGS7BPQ6MZT1 257 aaPredicted RBP12.01□□□□□ -0.49
LDB3-207ENST00000542786 BEND4Q6ZU67 534 aa12.01□□□□□ -0.49
LDB3-207ENST00000542786 Q8IYB0 196 aa12.01□□□□□ -0.49
LDB3-207ENST00000542786 RDH5Q92781 318 aa12.01□□□□□ -0.49
LDB3-207ENST00000542786 C18orf12Q96KH6 178 aa12.01□□□□□ -0.49
LDB3-207ENST00000542786 CABLES2Q9BTV7 478 aa12.01□□□□□ -0.49
LDB3-207ENST00000542786 METTL8Q9H825 291 aaKnown RBP12.01□□□□□ -0.49
LDB3-207ENST00000542786 MED9Q9NWA0 146 aa12.01□□□□□ -0.49
LDB3-207ENST00000542786 RASL12Q9NYN1 266 aa12.01□□□□□ -0.49
LDB3-207ENST00000542786 TUBD1Q9UJT1 453 aa12.01□□□□□ -0.49
LDB3-207ENST00000542786 TINAGQ9UJW2 476 aa12.01□□□□□ -0.49
LDB3-207ENST00000542786 POLDIP2Q9Y2S7 368 aa12.01□□□□□ -0.49
LDB3-207ENST00000542786 PRRC2CQ9Y520 2896 aaKnown RBP12□□□□□ -0.49
LDB3-207ENST00000542786 IGKV1D-13A0A0B4J2D9 117 aa12□□□□□ -0.49
LDB3-207ENST00000542786 MSGN1A6NI15 193 aa12□□□□□ -0.49
LDB3-207ENST00000542786 POM121CA8CG34 1229 aa12□□□□□ -0.49
LDB3-207ENST00000542786 H7C1Q1 480 aa12□□□□□ -0.49
LDB3-207ENST00000542786 SLC33A1O00400 549 aaPredicted RBP12□□□□□ -0.49
LDB3-207ENST00000542786 SPDEFO95238 335 aa12□□□□□ -0.49
LDB3-207ENST00000542786 IGKV1-13P0DP09 117 aa12□□□□□ -0.49
LDB3-207ENST00000542786 GNRHRP30968 328 aa12□□□□□ -0.49
LDB3-207ENST00000542786 HERV-K104P61576 105 aa12□□□□□ -0.49
LDB3-207ENST00000542786 RND3P61587 244 aa12□□□□□ -0.49
LDB3-207ENST00000542786 RAB32Q13637 225 aa12□□□□□ -0.49
LDB3-207ENST00000542786 ZNF146Q15072 292 aa12□□□□□ -0.49
LDB3-207ENST00000542786 OR8G1Q15617 311 aa12□□□□□ -0.49
LDB3-207ENST00000542786 MSMPQ1L6U9 139 aa12□□□□□ -0.49
LDB3-207ENST00000542786 BEX5Q5H9J7 111 aa12□□□□□ -0.49
LDB3-207ENST00000542786 MBNL2Q5VZF2 373 aaKnown RBP12□□□□□ -0.49
LDB3-207ENST00000542786 COMMD7Q86VX2 200 aa12□□□□□ -0.49
LDB3-207ENST00000542786 LHFPL5Q8TAF8 219 aa12□□□□□ -0.49
LDB3-207ENST00000542786 PLPPR1Q8TBJ4 325 aa12□□□□□ -0.49
LDB3-207ENST00000542786 FAM57AQ8TBR7 257 aa12□□□□□ -0.49
LDB3-207ENST00000542786 GLYATL2Q8WU03 294 aa12□□□□□ -0.49
LDB3-207ENST00000542786 SUCNR1Q9BXA5 334 aa12□□□□□ -0.49
LDB3-207ENST00000542786 REG4Q9BYZ8 158 aa12□□□□□ -0.49
LDB3-207ENST00000542786 BCL2L14Q9BZR8 327 aa12□□□□□ -0.49
LDB3-207ENST00000542786 TREM2Q9NZC2 230 aa12□□□□□ -0.49
LDB3-207ENST00000542786 CDIPTO14735 213 aa12□□□□□ -0.49
LDB3-207ENST00000542786 HS3ST1O14792 307 aa12□□□□□ -0.49
LDB3-207ENST00000542786 DEGS1O15121 323 aa12□□□□□ -0.49
LDB3-207ENST00000542786 TDGF1P3P51864 188 aa12□□□□□ -0.49
LDB3-207ENST00000542786 RAB14P61106 215 aa12□□□□□ -0.49
LDB3-207ENST00000542786 SP6Q3SY56 376 aa12□□□□□ -0.49
LDB3-207ENST00000542786 ABCA11PQ4W5N1 156 aa12□□□□□ -0.49
LDB3-207ENST00000542786 KRTCAP3Q53RY4 240 aa12□□□□□ -0.49
LDB3-207ENST00000542786 LIAT1Q6ZQX7 453 aa12□□□□□ -0.49
LDB3-207ENST00000542786 FAM219AQ8IW50 185 aa12□□□□□ -0.49
LDB3-207ENST00000542786 OR1S1Q8NH92 325 aa12□□□□□ -0.49
LDB3-207ENST00000542786 NEK7Q8TDX7 302 aa12□□□□□ -0.49
LDB3-207ENST00000542786 DCUN1D4Q92564 292 aa12□□□□□ -0.49
LDB3-207ENST00000542786 MARVELD3Q96A59 401 aa12□□□□□ -0.49
LDB3-207ENST00000542786 AQP10Q96PS8 301 aa12□□□□□ -0.49
LDB3-207ENST00000542786 CYTL1Q9NRR1 136 aa12□□□□□ -0.49
LDB3-207ENST00000542786 TMEM100Q9NV29 134 aa12□□□□□ -0.49
LDB3-207ENST00000542786 APC2O95996 2303 aa11.99□□□□□ -0.49
LDB3-207ENST00000542786 KANTRA0A1W2PQU2 76 aa11.99□□□□□ -0.49
LDB3-207ENST00000542786 NPIPB11E5RHQ5 1161 aa11.99□□□□□ -0.49
LDB3-207ENST00000542786 MKRN2OSH3BPM6 223 aa11.99□□□□□ -0.49
LDB3-207ENST00000542786 OR2H2O95918 312 aa11.99□□□□□ -0.49
LDB3-207ENST00000542786 TK1P04183 234 aa11.99□□□□□ -0.49
LDB3-207ENST00000542786 CTXN2P0C2S0 81 aa11.99□□□□□ -0.49
LDB3-207ENST00000542786 RCC1P18754 421 aaPredicted RBP11.99□□□□□ -0.49
LDB3-207ENST00000542786 HLA-DRB3P79483 266 aa11.99□□□□□ -0.49
LDB3-207ENST00000542786 NAAAQ02083 359 aa11.99□□□□□ -0.49
LDB3-207ENST00000542786 IAH1Q2TAA2 248 aaPredicted RBP11.99□□□□□ -0.49
LDB3-207ENST00000542786 ZNF497Q6ZNH5 498 aa11.99□□□□□ -0.49
LDB3-207ENST00000542786 SPACA3Q8IXA5 215 aa11.99□□□□□ -0.49
LDB3-207ENST00000542786 Q8NA96 180 aa11.99□□□□□ -0.49
LDB3-207ENST00000542786 CXorf58Q96LI9 332 aa11.99□□□□□ -0.49
LDB3-207ENST00000542786 DNAJB11Q9UBS4 358 aa11.99□□□□□ -0.49
LDB3-207ENST00000542786 ASPMQ8IZT6 3477 aa11.99□□□□□ -0.49
LDB3-207ENST00000542786 ANKRD11Q6UB99 2663 aaPredicted RBP11.99□□□□□ -0.49
LDB3-207ENST00000542786 CFAP47Q6ZTR5 3102 aa11.99□□□□□ -0.49
LDB3-207ENST00000542786 MPPED1O15442 326 aa11.98□□□□□ -0.49
LDB3-207ENST00000542786 MDH2P40926 338 aaKnown RBP11.98□□□□□ -0.49
LDB3-207ENST00000542786 LUMP51884 338 aaPredicted RBP11.98□□□□□ -0.49
LDB3-207ENST00000542786 FOXC1Q12948 553 aa11.98□□□□□ -0.49
LDB3-207ENST00000542786 C3orf36Q3SXR2 165 aa11.98□□□□□ -0.49
LDB3-207ENST00000542786 H1FOOQ8IZA3 346 aaPredicted RBP11.98□□□□□ -0.49
LDB3-207ENST00000542786 FAM185AQ8N0U4 392 aa11.98□□□□□ -0.49
LDB3-207ENST00000542786 CCDC71LQ8N9Z2 235 aa11.98□□□□□ -0.49
LDB3-207ENST00000542786 INO80EQ8NBZ0 244 aaPredicted RBP11.98□□□□□ -0.49
LDB3-207ENST00000542786 OR4A4PQ8NGN8 299 aa11.98□□□□□ -0.49
LDB3-207ENST00000542786 STOML3Q8TAV4 291 aa11.98□□□□□ -0.49
LDB3-207ENST00000542786 ABHD17AQ96GS6 310 aa11.98□□□□□ -0.49
LDB3-207ENST00000542786 CNTNAP3BQ96NU0 1288 aa11.98□□□□□ -0.49
LDB3-207ENST00000542786 TP53RKQ96S44 253 aa11.98□□□□□ -0.49
LDB3-207ENST00000542786 ARPC5LQ9BPX5 153 aa11.98□□□□□ -0.49
LDB3-207ENST00000542786 SFXN3Q9BWM7 321 aa11.98□□□□□ -0.49
LDB3-207ENST00000542786 CNTNAP3Q9BZ76 1288 aa11.98□□□□□ -0.49
LDB3-207ENST00000542786 CXXC4Q9H2H0 198 aa11.98□□□□□ -0.49
LDB3-207ENST00000542786 KCNIP3Q9Y2W7 256 aa11.98□□□□□ -0.49
LDB3-207ENST00000542786 BET1O15155 118 aa11.97□□□□□ -0.49
LDB3-207ENST00000542786 GLI4P10075 376 aa11.97□□□□□ -0.49
LDB3-207ENST00000542786 SPIN3Q5JUX0 258 aa11.97□□□□□ -0.49
LDB3-207ENST00000542786 TIMM23BQ5SRD1 257 aa11.97□□□□□ -0.49
LDB3-207ENST00000542786 UNQ6126/PRO20091Q6UXV3 157 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms