RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 ZNF705FA8MVS1 300 aaPredicted RBP5□□□□□ -1.61
XRCC4-206ENST00000542685 HSD17B6O14756 317 aa5□□□□□ -1.61
XRCC4-206ENST00000542685 FGF17O60258 216 aa5□□□□□ -1.61
XRCC4-206ENST00000542685 YPEL1O60688 119 aa5□□□□□ -1.61
XRCC4-206ENST00000542685 SLC25A14O95258 325 aaPredicted RBP5□□□□□ -1.61
XRCC4-206ENST00000542685 SEMA4FO95754 770 aa5□□□□□ -1.61
XRCC4-206ENST00000542685 TXNDC12O95881 172 aa5□□□□□ -1.61
XRCC4-206ENST00000542685 MT-CO2P00403 227 aa5□□□□□ -1.61
XRCC4-206ENST00000542685 IGKV3-20P01619 116 aa5□□□□□ -1.61
XRCC4-206ENST00000542685 CLEC3BP05452 202 aa5□□□□□ -1.61
XRCC4-206ENST00000542685 OR4Q2P0C623 313 aa5□□□□□ -1.61
XRCC4-206ENST00000542685 ZNF705DP0CH99 300 aaPredicted RBP5□□□□□ -1.61
XRCC4-206ENST00000542685 ZNF705BP0CI00 300 aaPredicted RBP5□□□□□ -1.61
XRCC4-206ENST00000542685 CCL2P13500 99 aa5□□□□□ -1.61
XRCC4-206ENST00000542685 F3P13726 295 aa5□□□□□ -1.61
XRCC4-206ENST00000542685 HNRNPA2B1P22626 353 aaKnown RBP5□□□□□ -1.61
XRCC4-206ENST00000542685 CDK2P24941 298 aa5□□□□□ -1.61
XRCC4-206ENST00000542685 GABRA3P34903 492 aa5□□□□□ -1.61
XRCC4-206ENST00000542685 TIMP3P35625 211 aa5□□□□□ -1.61
XRCC4-206ENST00000542685 THPOP40225 353 aa5□□□□□ -1.61
XRCC4-206ENST00000542685 AQP2P41181 271 aa5□□□□□ -1.61
XRCC4-206ENST00000542685 RGRP47804 291 aa5□□□□□ -1.61
XRCC4-206ENST00000542685 LGALS7P47929 136 aa5□□□□□ -1.61
XRCC4-206ENST00000542685 TPPP2P59282 170 aa5□□□□□ -1.61
XRCC4-206ENST00000542685 SNRPD1P62314 119 aaKnown RBP5□□□□□ -1.61
XRCC4-206ENST00000542685 LCN2P80188 198 aa5□□□□□ -1.61
XRCC4-206ENST00000542685 BAXQ07812 192 aa5□□□□□ -1.61
XRCC4-206ENST00000542685 ZNF154Q13106 437 aa5□□□□□ -1.61
XRCC4-206ENST00000542685 RAB31Q13636 194 aa5□□□□□ -1.61
XRCC4-206ENST00000542685 ENDOGQ14249 297 aaKnown RBP5□□□□□ -1.61
XRCC4-206ENST00000542685 CDK5R1Q15078 307 aa5□□□□□ -1.61
XRCC4-206ENST00000542685 ELOCQ15369 112 aa5□□□□□ -1.61
XRCC4-206ENST00000542685 C18orf21Q32NC0 220 aaPredicted RBP5□□□□□ -1.61
XRCC4-206ENST00000542685 BEX5Q5H9J7 111 aa5□□□□□ -1.61
XRCC4-206ENST00000542685 ZNF506Q5JVG8 444 aa5□□□□□ -1.61
XRCC4-206ENST00000542685 ACTL10Q5JWF8 245 aa5□□□□□ -1.61
XRCC4-206ENST00000542685 CPTPQ5TA50 214 aa5□□□□□ -1.61
XRCC4-206ENST00000542685 LEG1Q6P5S2 330 aa5□□□□□ -1.61
XRCC4-206ENST00000542685 TMEM220Q6QAJ8 160 aa5□□□□□ -1.61
XRCC4-206ENST00000542685 C16orf82Q7Z2V1 217 aa5□□□□□ -1.61
XRCC4-206ENST00000542685 ZNF429Q86V71 674 aa5□□□□□ -1.61
XRCC4-206ENST00000542685 TCTEX1D1Q8N7M0 179 aa5□□□□□ -1.61
XRCC4-206ENST00000542685 STXBP6Q8NFX7 210 aa5□□□□□ -1.61
XRCC4-206ENST00000542685 OR4D9Q8NGE8 314 aa5□□□□□ -1.61
XRCC4-206ENST00000542685 ZNF596Q8TC21 504 aa5□□□□□ -1.61
XRCC4-206ENST00000542685 SMPDL3BQ92485 455 aa5□□□□□ -1.61
XRCC4-206ENST00000542685 SLAMF6Q96DU3 332 aa5□□□□□ -1.61
XRCC4-206ENST00000542685 MS4A10Q96PG2 267 aa5□□□□□ -1.61
XRCC4-206ENST00000542685 YPEL2Q96QA6 119 aa5□□□□□ -1.61
XRCC4-206ENST00000542685 ZNF607Q96SK3 696 aa5□□□□□ -1.61
XRCC4-206ENST00000542685 P2RX4Q99571 388 aa5□□□□□ -1.61
XRCC4-206ENST00000542685 GABRG3Q99928 467 aa5□□□□□ -1.61
XRCC4-206ENST00000542685 CCDC3Q9BQI4 270 aa5□□□□□ -1.61
XRCC4-206ENST00000542685 CABLES2Q9BTV7 478 aa5□□□□□ -1.61
XRCC4-206ENST00000542685 C20orf24Q9BUV8 137 aa5□□□□□ -1.61
XRCC4-206ENST00000542685 RNF126Q9BV68 326 aa5□□□□□ -1.61
XRCC4-206ENST00000542685 MAP1LC3BQ9GZQ8 125 aa5□□□□□ -1.61
XRCC4-206ENST00000542685 BANF2Q9H503 90 aa5□□□□□ -1.61
XRCC4-206ENST00000542685 Q9N2K0 584 aa5□□□□□ -1.61
XRCC4-206ENST00000542685 FGF21Q9NSA1 209 aa5□□□□□ -1.61
XRCC4-206ENST00000542685 TMEM106BQ9NUM4 274 aa5□□□□□ -1.61
XRCC4-206ENST00000542685 MRPL15Q9P015 296 aaKnown RBP5□□□□□ -1.61
XRCC4-206ENST00000542685 LHX3Q9UBR4 397 aa5□□□□□ -1.61
XRCC4-206ENST00000542685 RHBDD3Q9Y3P4 386 aa5□□□□□ -1.61
XRCC4-206ENST00000542685 TBL2Q9Y4P3 447 aaKnown RBP5□□□□□ -1.61
XRCC4-206ENST00000542685 OBSL1O75147 1896 aa5□□□□□ -1.61
XRCC4-206ENST00000542685 A0A0A0MQY5 61 aa4.99□□□□□ -1.61
XRCC4-206ENST00000542685 OR6C6A6NF89 314 aa4.99□□□□□ -1.61
XRCC4-206ENST00000542685 RBFOX3A6NFN3 312 aa4.99□□□□□ -1.61
XRCC4-206ENST00000542685 A6NIN4 97 aa4.99□□□□□ -1.61
XRCC4-206ENST00000542685 KLRC4-KLRK1H3BQV0 150 aa4.99□□□□□ -1.61
XRCC4-206ENST00000542685 M0QZ24 198 aa4.99□□□□□ -1.61
XRCC4-206ENST00000542685 SOCS6O14544 535 aa4.99□□□□□ -1.61
XRCC4-206ENST00000542685 HSPB6O14558 160 aa4.99□□□□□ -1.61
XRCC4-206ENST00000542685 FFAR1O14842 300 aa4.99□□□□□ -1.61
XRCC4-206ENST00000542685 GEMIN2O14893 280 aaKnown RBP4.99□□□□□ -1.61
XRCC4-206ENST00000542685 FCMRO60667 390 aa4.99□□□□□ -1.61
XRCC4-206ENST00000542685 MTX2O75431 263 aa4.99□□□□□ -1.61
XRCC4-206ENST00000542685 LRATO95237 230 aa4.99□□□□□ -1.61
XRCC4-206ENST00000542685 REG1AP05451 166 aa4.99□□□□□ -1.61
XRCC4-206ENST00000542685 SRP19P09132 144 aaKnown RBP4.99□□□□□ -1.61
XRCC4-206ENST00000542685 MMP7P09237 267 aaPredicted RBP4.99□□□□□ -1.61
XRCC4-206ENST00000542685 PIRTP0C851 137 aa4.99□□□□□ -1.61
XRCC4-206ENST00000542685 GZMHP20718 246 aa4.99□□□□□ -1.61
XRCC4-206ENST00000542685 GNLYP22749 145 aa4.99□□□□□ -1.61
XRCC4-206ENST00000542685 CST5P28325 142 aaPredicted RBP4.99□□□□□ -1.61
XRCC4-206ENST00000542685 SERPINA4P29622 427 aa4.99□□□□□ -1.61
XRCC4-206ENST00000542685 SRP14P37108 136 aaKnown RBP4.99□□□□□ -1.61
XRCC4-206ENST00000542685 FRKP42685 505 aaPredicted RBP4.99□□□□□ -1.61
XRCC4-206ENST00000542685 OR1E2P47887 323 aa4.99□□□□□ -1.61
XRCC4-206ENST00000542685 P2RY1P47900 373 aa4.99□□□□□ -1.61
XRCC4-206ENST00000542685 PGFP49763 221 aa4.99□□□□□ -1.61
XRCC4-206ENST00000542685 CNN1P51911 297 aaKnown RBP4.99□□□□□ -1.61
XRCC4-206ENST00000542685 RPL23AP62750 156 aaKnown RBP4.99□□□□□ -1.61
XRCC4-206ENST00000542685 BTG2P78543 158 aa4.99□□□□□ -1.61
XRCC4-206ENST00000542685 FZD2Q14332 565 aa4.99□□□□□ -1.61
XRCC4-206ENST00000542685 ATXN7L3Q14CW9 347 aaPredicted RBP4.99□□□□□ -1.61
XRCC4-206ENST00000542685 EXT1Q16394 746 aa4.99□□□□□ -1.61
XRCC4-206ENST00000542685 CDKN3Q16667 212 aa4.99□□□□□ -1.61
XRCC4-206ENST00000542685 LRRC37A5PQ49AS3 106 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms