RNA–Protein interactions for RNA: ENST00000541687.5

GCFC2-211, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 2 BASIC

Gene GCFC2, Length 4,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-211ENST00000541687 MPLP40238 635 aa12.63□□□□□ -0.39
GCFC2-211ENST00000541687 KCNJ3P48549 501 aa12.63□□□□□ -0.39
GCFC2-211ENST00000541687 GNG3P63215 75 aa12.63□□□□□ -0.39
GCFC2-211ENST00000541687 RNF212Q495C1 297 aa12.63□□□□□ -0.39
GCFC2-211ENST00000541687 ZNF787Q6DD87 383 aa12.63□□□□□ -0.39
GCFC2-211ENST00000541687 DBX2Q6ZNG2 339 aa12.63□□□□□ -0.39
GCFC2-211ENST00000541687 H2BFWTQ7Z2G1 175 aa12.63□□□□□ -0.39
GCFC2-211ENST00000541687 CLDN23Q96B33 292 aa12.63□□□□□ -0.39
GCFC2-211ENST00000541687 FAM103A1Q9BTL3 118 aaKnown RBP12.63□□□□□ -0.39
GCFC2-211ENST00000541687 GPR35Q9HC97 309 aa12.63□□□□□ -0.39
GCFC2-211ENST00000541687 RYDENQ9NUL5 291 aaKnown RBP12.63□□□□□ -0.39
GCFC2-211ENST00000541687 DENND4CQ5VZ89 1909 aa12.63□□□□□ -0.39
GCFC2-211ENST00000541687 C20orf202A1L168 122 aa12.62□□□□□ -0.39
GCFC2-211ENST00000541687 SCGB2A1O75556 95 aa12.62□□□□□ -0.39
GCFC2-211ENST00000541687 PRAMEF5Q5TYX0 476 aa12.62□□□□□ -0.39
GCFC2-211ENST00000541687 PRAMEF6Q5VXH4 476 aa12.62□□□□□ -0.39
GCFC2-211ENST00000541687 SLC35G3Q8N808 338 aa12.62□□□□□ -0.39
GCFC2-211ENST00000541687 hCG_1809904A0A1W2PP81 198 aa12.62□□□□□ -0.39
GCFC2-211ENST00000541687 A0A1W2PR64 198 aa12.62□□□□□ -0.39
GCFC2-211ENST00000541687 A0A1W2PRV1 198 aa12.62□□□□□ -0.39
GCFC2-211ENST00000541687 DEFB108AA8MXU0 73 aa12.62□□□□□ -0.39
GCFC2-211ENST00000541687 RAB13P51153 203 aa12.62□□□□□ -0.39
GCFC2-211ENST00000541687 SURF2Q15527 256 aaPredicted RBP12.62□□□□□ -0.39
GCFC2-211ENST00000541687 AWAT1Q58HT5 328 aa12.62□□□□□ -0.39
GCFC2-211ENST00000541687 FAM27BQ5VT28 67 aa12.62□□□□□ -0.39
GCFC2-211ENST00000541687 FBXO17Q96EF6 278 aa12.62□□□□□ -0.39
GCFC2-211ENST00000541687 RAB9BQ9NP90 201 aa12.62□□□□□ -0.39
GCFC2-211ENST00000541687 DYNLRB1Q9NP97 96 aa12.62□□□□□ -0.39
GCFC2-211ENST00000541687 GPR27Q9NS67 375 aa12.62□□□□□ -0.39
GCFC2-211ENST00000541687 ZNF319Q9P2F9 582 aa12.62□□□□□ -0.39
GCFC2-211ENST00000541687 FCGR3AP08637 254 aa12.62□□□□□ -0.39
GCFC2-211ENST00000541687 HOXD4P09016 255 aaPredicted RBP12.62□□□□□ -0.39
GCFC2-211ENST00000541687 TNFSF4P23510 183 aa12.62□□□□□ -0.39
GCFC2-211ENST00000541687 ZNF90Q03938 601 aa12.62□□□□□ -0.39
GCFC2-211ENST00000541687 FABP9Q0Z7S8 132 aa12.62□□□□□ -0.39
GCFC2-211ENST00000541687 SPINK9Q5DT21 86 aa12.62□□□□□ -0.39
GCFC2-211ENST00000541687 RTN4RL2Q86UN3 420 aa12.62□□□□□ -0.39
GCFC2-211ENST00000541687 OR10V1Q8NGI7 309 aa12.62□□□□□ -0.39
GCFC2-211ENST00000541687 OR10D4PQ8NGN7 298 aa12.62□□□□□ -0.39
GCFC2-211ENST00000541687 M1APQ8TC57 530 aa12.62□□□□□ -0.39
GCFC2-211ENST00000541687 TMEM37Q8WXS4 190 aa12.62□□□□□ -0.39
GCFC2-211ENST00000541687 ZNF524Q96C55 264 aa12.62□□□□□ -0.39
GCFC2-211ENST00000541687 MUCL1Q96DR8 90 aa12.62□□□□□ -0.39
GCFC2-211ENST00000541687 TAAR9Q96RI9 348 aa12.62□□□□□ -0.39
GCFC2-211ENST00000541687 CACNG5Q9UF02 275 aa12.62□□□□□ -0.39
GCFC2-211ENST00000541687 CDK2AP1O14519 115 aa12.61□□□□□ -0.39
GCFC2-211ENST00000541687 NPIPB7O75200 414 aa12.61□□□□□ -0.39
GCFC2-211ENST00000541687 CRYBA1P05813 215 aa12.61□□□□□ -0.39
GCFC2-211ENST00000541687 TMEM50BP56557 158 aa12.61□□□□□ -0.39
GCFC2-211ENST00000541687 SLC16A13Q7RTY0 426 aa12.61□□□□□ -0.39
GCFC2-211ENST00000541687 A0A1W2PPH5 198 aa12.61□□□□□ -0.39
GCFC2-211ENST00000541687 CLEC18AA5D8T8 446 aa12.61□□□□□ -0.39
GCFC2-211ENST00000541687 OR10J4P0C629 311 aa12.61□□□□□ -0.39
GCFC2-211ENST00000541687 FGF8P55075 233 aaPredicted RBP12.61□□□□□ -0.39
GCFC2-211ENST00000541687 TRA2AQ13595 282 aaKnown RBP eCLIP12.61□□□□□ -0.393e-7■■■■■ 29.3
GCFC2-211ENST00000541687 LY6G6FQ5SQ64 297 aa12.61□□□□□ -0.39
GCFC2-211ENST00000541687 SSX7Q7RTT5 188 aa12.61□□□□□ -0.39
GCFC2-211ENST00000541687 SKA3Q8IX90 412 aa12.61□□□□□ -0.39
GCFC2-211ENST00000541687 CLEC18CQ8NCF0 446 aa12.61□□□□□ -0.39
GCFC2-211ENST00000541687 SLC25A28Q96A46 364 aa12.61□□□□□ -0.39
GCFC2-211ENST00000541687 GDF15Q99988 308 aa12.61□□□□□ -0.39
GCFC2-211ENST00000541687 STARD10Q9Y365 291 aa12.61□□□□□ -0.39
GCFC2-211ENST00000541687 PI4KAP42356 2102 aa12.61□□□□□ -0.39
GCFC2-211ENST00000541687 UBE2L5PA0A1B0GUS4 154 aa12.61□□□□□ -0.39
GCFC2-211ENST00000541687 CHST1O43916 411 aa12.61□□□□□ -0.39
GCFC2-211ENST00000541687 FGF2P09038 288 aa12.61□□□□□ -0.39
GCFC2-211ENST00000541687 G0S2P27469 103 aa12.61□□□□□ -0.39
GCFC2-211ENST00000541687 ENDOGQ14249 297 aaKnown RBP12.61□□□□□ -0.39
GCFC2-211ENST00000541687 SSPNQ14714 243 aa12.61□□□□□ -0.39
GCFC2-211ENST00000541687 HIKESHIQ53FT3 197 aa12.61□□□□□ -0.39
GCFC2-211ENST00000541687 RNF144BQ7Z419 303 aa12.61□□□□□ -0.39
GCFC2-211ENST00000541687 KCNMB2Q9Y691 235 aa12.61□□□□□ -0.39
GCFC2-211ENST00000541687 WSB1Q9Y6I7 421 aa12.61□□□□□ -0.39
GCFC2-211ENST00000541687 CST2P09228 141 aa12.61□□□□□ -0.39
GCFC2-211ENST00000541687 BMP5P22003 454 aa12.61□□□□□ -0.39
GCFC2-211ENST00000541687 CEACAM6P40199 344 aa12.61□□□□□ -0.39
GCFC2-211ENST00000541687 ZNF154Q13106 437 aa12.61□□□□□ -0.39
GCFC2-211ENST00000541687 DNASE2BQ8WZ79 361 aa12.61□□□□□ -0.39
GCFC2-211ENST00000541687 SRXN1Q9BYN0 137 aa12.61□□□□□ -0.39
GCFC2-211ENST00000541687 A0A1B0GTI1 187 aa12.6□□□□□ -0.39
GCFC2-211ENST00000541687 A0A1W2PNV4 684 aa12.6□□□□□ -0.39
GCFC2-211ENST00000541687 TERTO14746 1132 aaKnown RBP12.6□□□□□ -0.39
GCFC2-211ENST00000541687 NAT1P18440 290 aa12.6□□□□□ -0.39
GCFC2-211ENST00000541687 MEOX1P50221 254 aa12.6□□□□□ -0.39
GCFC2-211ENST00000541687 UBE2G2P60604 165 aa12.6□□□□□ -0.39
GCFC2-211ENST00000541687 OR10AD1Q8NGE0 317 aa12.6□□□□□ -0.39
GCFC2-211ENST00000541687 SAP25Q8TEE9 199 aa12.6□□□□□ -0.39
GCFC2-211ENST00000541687 ERGIC1Q969X5 290 aa12.6□□□□□ -0.39
GCFC2-211ENST00000541687 ADGRG7Q96K78 797 aa12.6□□□□□ -0.39
GCFC2-211ENST00000541687 SF3B5Q9BWJ5 86 aaKnown RBP12.6□□□□□ -0.39
GCFC2-211ENST00000541687 B3GAT1Q9P2W7 334 aa12.6□□□□□ -0.39
GCFC2-211ENST00000541687 LIPGQ9Y5X9 500 aa12.6□□□□□ -0.39
GCFC2-211ENST00000541687 IGHV1-45A0A0A0MS14 117 aa12.6□□□□□ -0.39
GCFC2-211ENST00000541687 SPINT2O43291 252 aa12.6□□□□□ -0.39
GCFC2-211ENST00000541687 SPP1P10451 314 aa12.6□□□□□ -0.39
GCFC2-211ENST00000541687 TOLLIPQ9H0E2 274 aa12.6□□□□□ -0.39
GCFC2-211ENST00000541687 IFT22Q9H7X7 185 aa12.6□□□□□ -0.39
GCFC2-211ENST00000541687 ZNF331Q9NQX6 463 aaPredicted RBP12.6□□□□□ -0.39
GCFC2-211ENST00000541687 TRGV5A0A0B4J1U4 118 aa12.6□□□□□ -0.39
GCFC2-211ENST00000541687 IGHV3-43A0A0B4J1X8 118 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms